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Frankia sp. CcI3, complete genome - 1..5433628 4499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 67.97 0 35..1723 + 562 86738725 - Francci3_0001 - chromosomal replication initiator protein DnaA 2 70.14 0 2488..3696 + 402 86738726 - Francci3_0003 - DNA polymerase III, beta subunit 3 71.17 0 3698..4897 + 399 86738727 recF Francci3_0004 - recombination protein F 4 76.76 +1 4887..5708 + 273 86738728 - Francci3_0005 - hypothetical protein 5 66.03 -1 5916..7955 + 679 86738729 gyrB Francci3_0006 - DNA gyrase subunit B 6 67.78 0 8155..10659 + 834 86738730 - Francci3_0007 - DNA gyrase subunit A 7 76.89 +1 10825..11724 - 299 86738731 - Francci3_0008 - hypothetical protein 8 69.87 0 11810..12496 + 228 86738732 - Francci3_0009 - hypothetical protein 9 72.58 0 13122..14525 + 467 86738733 - Francci3_0010 - glycosyl transferase, group 1 10 70.08 0 14536..15267 + 243 86738734 - Francci3_0011 - methyltransferase type 11 11 72.08 0 15254..16435 + 393 86738735 - Francci3_0012 - hypothetical protein 12 72.60 0 16418..16990 - 190 86738736 - Francci3_0013 - hypothetical protein 13 67.82 0 17127..17819 - 230 86738737 - Francci3_0014 - peptide deformylase 14 67.83 0 18601..20655 + 684 86738738 - Francci3_0015 - glycosyl transferase family protein 15 68.99 0 20624..22171 + 515 86738739 - Francci3_0016 - acyltransferase 3 16 68.47 0 22428..25316 + 962 86738740 - Francci3_0017 - CRISPR-associated helicase Cas3 family protein protein 17 67.82 0 25679..27331 + 550 86738741 - Francci3_0018 - hypothetical protein 18 68.76 0 27358..27978 + 206 86738742 - Francci3_0019 - hypothetical protein 19 66.93 0 28057..29211 + 384 86738743 - Francci3_0020 - CRISPR-associated Cse4 family protein 20 72.92 0 29208..30038 + 276 86738744 - Francci3_0021 - CRISPR-associated Cas5e family protein 21 71.50 0 30046..30873 + 275 86738745 - Francci3_0022 - hypothetical protein 22 67.88 0 30875..31867 + 330 86738746 - Francci3_0023 - CRISPR-associated Cas1 family protein 23 67.74 0 31864..32142 + 92 86738747 - Francci3_0024 - CRISPR-associated Cas2 family protein 24 69.73 0 32272..32565 + 97 86738748 - Francci3_0025 - hypothetical protein 25 71.37 0 32562..32816 + 84 86738749 - Francci3_0026 - hypothetical protein 26 70.78 0 32939..34468 + 509 86738750 - Francci3_0027 - hypothetical protein 27 67.60 0 34525..34953 - 142 86738751 - Francci3_0028 - OsmC-like protein 28 67.39 0 35311..35586 - 91 86738752 - Francci3_0029 - hypothetical protein 29 70.13 0 35871..37199 - 442 86738753 - Francci3_0030 - secretory lipase 30 64.19 -1 37685..38491 + 268 86738754 - Francci3_0031 - hypothetical protein 31 66.08 -1 38911..39249 - 112 86738755 - Francci3_0032 - nitrogen regulatory protein P-II 32 69.80 0 39396..39938 + 180 86738756 - Francci3_0033 - PBP family phospholipid-binding protein 33 71.30 0 39979..42114 - 711 86738757 - Francci3_0034 - Type IV secretory pathway VirB4 components-like 34 68.73 0 42111..43613 - 500 86738758 - Francci3_0035 - putative integral membrane protein 35 68.26 0 43653..45035 - 460 86738759 - Francci3_0036 - hypothetical protein 36 57.25 -2 45032..45817 - 261 86738760 - Francci3_0037 - hypothetical protein 37 64.75 -1 45887..46303 - 138 86738761 - Francci3_0038 - hypothetical protein 38 73.79 +1 46300..48741 - 813 86738762 - Francci3_0039 - hypothetical protein 39 75.80 +1 49299..50174 + 291 86738763 - Francci3_0040 - hypothetical protein 40 70.98 0 50181..51176 + 331 86738764 - Francci3_0041 - NLP/P60 41 62.55 -2 51205..51471 + 88 86738765 - Francci3_0042 - hypothetical protein 42 71.29 0 51706..53304 - 532 86738766 - Francci3_0043 - twin-arginine translocation pathway signal 43 70.60 0 53428..56019 - 863 86738767 - Francci3_0044 - serine/threonine protein kinase 44 67.09 0 56163..57833 + 556 86738768 - Francci3_0045 - glucose-6-phosphate isomerase 45 71.93 0 57927..58268 + 113 86738769 - Francci3_0046 - anti-sigma-factor antagonist domain-containing protein 46 71.30 0 58859..59182 + 107 86738770 - Francci3_0047 - hypothetical protein 47 72.32 0 59204..62632 - 1142 86738771 - Francci3_0048 - adenylate/guanylate cyclase 48 67.86 0 62629..62964 - 111 86738772 - Francci3_0049 - ABC-type multidrug transport system ATPase component-like 49 72.41 0 63095..63721 + 208 86738773 - Francci3_0050 - nitroreductase 50 75.38 +1 63817..64413 + 198 86738774 - Francci3_0051 - hypothetical protein 51 72.91 0 64448..67876 - 1142 86738775 - Francci3_0052 - hypothetical protein 52 67.80 0 68071..69915 + 614 86738776 - Francci3_0053 - acyl-CoA dehydrogenase-like 53 67.92 0 69967..70365 + 132 86738777 - Francci3_0054 - hypothetical protein 54 65.82 -1 70487..70723 - 78 86738778 - Francci3_0055 - hypothetical protein 55 72.25 0 70854..72428 - 524 86738779 - Francci3_0056 - dehydrogenase subunit 56 69.77 0 72481..73542 - 353 86738780 - Francci3_0057 - transketolase 57 70.83 0 73539..74738 - 399 86738781 - Francci3_0058 - pyruvate dehydrogenase 58 71.16 0 74865..75776 + 303 86738782 - Francci3_0059 - hypothetical protein 59 72.82 0 75885..77102 + 405 86738783 - Francci3_0060 - poly-gamma-glutamate biosynthesis protein 60 71.79 0 77199..77627 - 142 86738784 - Francci3_0061 - zinc uptake regulator 61 73.91 +1 78169..78789 + 206 86738785 - Francci3_0062 - hypothetical protein 62 71.33 0 78731..80380 - 549 86738786 - Francci3_0063 - hypothetical protein 63 67.71 0 80424..81671 - 415 86738787 - Francci3_0064 - aminotransferase AlaT 64 66.93 0 82288..82662 + 124 86738788 - Francci3_0065 - hypothetical protein 65 63.03 -1 82641..82997 - 118 86738789 - Francci3_0066 - hypothetical protein 66 57.08 -2 83126..84502 - 458 86738790 - Francci3_0067 - HNH endonuclease 67 68.90 0 85040..86473 - 477 86738791 - Francci3_0068 - sigma-24 68 69.89 0 86820..88559 - 579 86738792 - Francci3_0069 - peptidase S1 and S6, chymotrypsin/Hap 69 62.12 -2 88699..89094 - 131 86738793 - Francci3_0070 - large conductance mechanosensitive channel protein 70 72.82 0 89381..90892 + 503 86738794 - Francci3_0071 - hypothetical protein 71 71.76 0 90921..92099 - 392 86738795 - Francci3_0072 - Poly(3-hydroxybutyrate) depolymerase-like 72 67.68 0 92127..92720 - 197 86738796 - Francci3_0073 - hypothetical protein 73 70.38 0 92722..93798 - 358 86738797 - Francci3_0074 - hypothetical protein 74 71.74 0 94020..94670 + 216 86738798 - Francci3_0075 - phage SPO1 DNA polymerase-related protein 75 67.39 0 94744..95439 - 231 86738799 - Francci3_0076 - ErfK/YbiS/YcfS/YnhG 76 69.91 0 95499..96299 - 266 86738800 - Francci3_0077 - hypothetical protein 77 65.62 -1 96417..97085 + 222 86738801 - Francci3_0078 - hypothetical protein 78 73.12 0 97224..98060 - 278 86738802 - Francci3_0079 - pyridoxamine 5'-phosphate oxidase 79 66.41 0 98144..98539 - 131 86738803 - Francci3_0080 - putative ATP/GTP binding protein 80 70.90 0 98966..100075 + 369 86738804 - Francci3_0081 - citrate synthase 2 81 71.73 0 100068..101192 + 374 86738805 - Francci3_0082 - phosphoserine aminotransferase 82 65.13 -1 101296..102663 - 455 86738806 - Francci3_0083 - citrate synthase 83 71.25 0 102901..103620 - 239 86738807 - Francci3_0084 - two component LuxR family transcriptional regulator 84 70.35 0 103611..105374 - 587 86738808 - Francci3_0085 - putative signal transduction histidine kinase 85 72.69 0 105749..106180 + 143 86738809 - Francci3_0086 - MarR family transcriptional regulator 86 73.39 0 106217..107347 - 376 86738810 - Francci3_0087 - dehydrogenases and related proteins-like 87 76.02 +1 107420..108103 + 227 86738811 - Francci3_0088 - 2',5' RNA ligase 88 73.64 +1 108070..108585 - 171 86738812 - Francci3_0089 - response regulator receiver protein 89 70.16 0 109230..110144 + 304 86738813 - Francci3_0090 - hypothetical protein 90 72.86 0 110202..110540 + 112 86738814 - Francci3_0091 - hypothetical protein 91 74.81 +1 110569..114177 - 1202 86738815 - Francci3_0092 - hypothetical protein 92 74.91 +1 114314..115126 + 270 86738816 - Francci3_0093 - hypothetical protein 93 71.31 0 115384..117018 + 544 86738817 - Francci3_0094 - amidophosphoribosyltransferase 94 72.34 0 117015..118124 + 369 86738818 - Francci3_0095 - phosphoribosylaminoimidazole synthetase 95 61.35 -2 118388..118594 - 68 86738819 - Francci3_0096 - hypothetical protein 96 72.92 0 118976..120046 - 356 86738820 - Francci3_0097 - valine dehydrogenase (NAD) 97 70.04 0 120308..121138 + 276 86738821 - Francci3_0098 - hypothetical protein 98 64.25 -1 121291..121497 + 68 86738822 - Francci3_0099 - excisionase/Xis, DNA-binding 99 71.31 0 122042..122794 + 250 86738823 - Francci3_0100 - hypothetical protein 100 70.77 0 123143..124507 - 454 86738824 - Francci3_0101 - hypothetical protein 69.98 MEAN 3.62 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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