version 1.0
Yersinia pestis CO92, complete genome - 1..4653728 3885 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 42.86 -1 271..711 - 146 16120354 - YPO0001 - flavodoxin 2 41.56 -1 804..1265 - 153 16120355 asnC YPO0002 - DNA-binding transcriptional regulator AsnC 3 45.52 0 1435..2427 + 330 16120356 asnA YPO0003 - asparagine synthetase AsnA 4 47.72 0 2526..3992 - 488 16120357 yieM YPO0004 - hypothetical protein 5 46.65 0 3996..5549 - 517 16120358 - YPO0005 - regulatory ATPase RavA 6 45.80 0 5823..7691 + 622 16120359 trkD YPO0006 - potassium transport protein Kup 7 48.10 0 7896..8315 + 139 16120360 - YPO0007 - D-ribose pyranase 8 50.05 0 8366..9292 + 308 16120361 rbsK YPO0008 - ribokinase 9 46.46 0 9512..10936 - 474 16120362 - YPO0009 - putative membrane transport protein 10 44.06 0 11016..11705 - 229 16120363 - YPO0010 - putative GntR-famly transcriptional regulator 11 49.79 0 17906..19114 + 402 16120364 y1062 YPO0011 - transposase for the IS285 insertion element 12 40.68 -1 19172..19702 - 176 16120365 mobB YPO0012 - molybdopterin-guanine dinucleotide biosynthesis protein B 13 43.30 0 19702..20343 - 213 16120366 mobA YPO0013 - molybdopterin-guanine dinucleotide biosynthesis protein A 14 41.11 -1 20443..20712 + 89 16120367 - YPO0013a - hypothetical protein 15 46.50 0 20792..21778 + 328 16120368 - YPO0014 - serine/threonine protein kinase 16 42.15 -1 21806..22429 + 207 16120369 dsbA YPO0015 - periplasmic protein disulfide isomerase I 17 47.52 0 22921..25719 + 932 16120370 polA YPO0017 - DNA polymerase I 18 45.97 0 26128..26586 + 152 16120371 tnp YPO0018 - transposase for the IS1541 insertion element 19 46.54 0 26838..27488 - 216 16120372 - YPO0019 - GTPase EngB 20 48.50 0 28233..28799 + 188 16120373 - YPO0020 - hypothetical protein 21 47.74 0 28982..30355 + 457 16120374 hemN YPO0021 - coproporphyrinogen III oxidase 22 52.65 0 30409..31821 - 470 16120375 glnG YPO0022 - nitrogen regulation protein NR(I) 23 49.24 0 31829..32878 - 349 16120376 glnL YPO0023 - nitrogen regulation protein NR(II) 24 50.78 0 33131..34540 - 469 16120377 glnA YPO0024 - glutamine synthetase 25 42.77 -1 34726..34884 - 52 16120378 - YPO0025 - hypothetical protein 26 49.01 0 35102..36925 + 607 16120379 bipA YPO0026 - putative GTPase 27 44.16 0 37247..37837 + 196 16120380 - YPO0027 - phosphatase 28 48.02 0 37934..38818 + 294 16120381 rbn YPO0028 - ribonuclease BN 29 48.86 0 38825..39262 + 145 16120382 - YPO0029 - D-tyrosyl-tRNA deacylase 30 50.45 0 39336..40118 - 260 16120383 - YPO0030 - transposase/IS protein 31 52.79 0 40115..41137 - 340 16120384 - YPO0031 - transposase for insertion sequence IS100 32 50.97 0 41407..42330 + 307 16120385 - YPO0032 - hypothetical protein 33 48.30 0 42465..44174 - 569 16120386 - YPO0033 - hypothetical protein 34 50.51 0 44322..45707 - 461 16120387 - YPO0034 - putative membrane permease 35 50.04 0 45945..47159 + 404 16120388 gltS YPO0035 - sodium/glutamate symport carrier protein 36 51.63 0 47525..49606 - 693 16120389 recG YPO0036 - ATP-dependent DNA helicase RecG 37 49.64 0 49607..50299 - 230 16120390 trmH YPO0037 - tRNA guanosine-2'-O-methyltransferase 38 48.93 0 50305..52413 - 702 16120391 spoT YPO0038 - bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 39 51.45 0 52433..52708 - 91 16120392 rpoZ YPO0039 - DNA-directed RNA polymerase subunit omega 40 46.47 0 52763..53386 - 207 16120393 gmk YPO0040 - guanylate kinase 41 48.12 0 53787..55490 + 567 16120394 ligB YPO0041 - NAD-dependent DNA ligase LigB 42 47.28 0 55503..56126 - 207 16120395 - YPO0042 - hypothetical protein 43 48.50 0 56529..57392 - 287 16120396 - YPO0043 - hypothetical protein 44 51.32 0 57519..58235 + 238 16120397 rph YPO0044 - ribonuclease PH 45 50.77 0 58402..59049 + 215 16120398 pyrE YPO0045 - orotate phosphoribosyltransferase 46 47.91 0 59184..59780 - 198 16120399 slmA YPO0046 - nucleoid occlusion protein 47 49.12 0 59902..60357 - 151 16120400 dut YPO0047 - deoxyuridine 5'-triphosphate nucleotidohydrolase 48 48.15 0 60338..61552 - 404 161486896 dfp YPO0048 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 49 45.44 0 61749..62417 + 222 16120402 radC YPO0049 - DNA repair protein RadC 50 50.63 0 62680..62916 + 78 16120403 rpmB YPO0050 - 50S ribosomal protein L28 51 39.29 -1 62928..63095 + 55 16120404 rpmG YPO0051 - 50S ribosomal protein L33 52 48.89 0 63178..63987 + 269 16120405 mutM YPO0052 - formamidopyrimidine-DNA glycosylase 53 46.25 0 63993..64472 - 159 16120406 coaD YPO0053 - phosphopantetheine adenylyltransferase 54 46.62 0 64469..65251 - 260 16120407 kdtX YPO0054 - lipopolysaccharide core biosynthesis glycosyl transferase 55 50.55 0 65252..66529 - 425 16120408 kdtA YPO0055 - 3-deoxy-D-manno-octulosonic-acid transferase 56 50.72 0 66949..67914 - 321 16120409 rfaC YPO0056 - ADP-heptose:LPS heptosyl transferase I 57 51.74 0 67914..68978 - 354 16120410 rfaF YPO0057 - ADP-heptose:LPS heptosyltransferase II 58 45.12 0 69009..69941 - 310 16120411 rfaD YPO0058 - ADP-L-glycero-D-mannoheptose-6-epimerase 59 50.17 0 70187..71398 + 403 16120412 kbl YPO0059 - 2-amino-3-ketobutyrate coenzyme A ligase 60 48.15 0 71408..72433 + 341 16120413 tdh YPO0060 - L-threonine 3-dehydrogenase 61 50.04 0 73529..74899 - 456 161486895 - YPO0063 - hypothetical protein 62 50.13 0 74909..76456 - 515 16120415 - YPO0064 - phosphoglyceromutase 63 45.06 0 76853..77287 + 144 16120416 - YPO0065 - hypothetical protein 64 51.41 0 77406..77654 + 82 16120417 grxC YPO0066 - glutaredoxin 3 65 48.43 0 77742..78218 + 158 16120418 secB YPO0067 - preprotein translocase subunit SecB 66 51.57 0 78218..79237 + 339 16120419 gpsA YPO0068 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 67 45.39 0 79297..79437 + 46 16120420 - YPO0069 - hypothetical protein 68 49.76 0 79503..80324 + 273 16120421 cysE YPO0070 - serine acetyltransferase 69 49.08 0 80447..80935 - 162 16120422 - YPO0071 - putative methyltransferase 70 52.02 0 81124..82188 + 354 16120423 - YPO0072 - bifunctional regulatory protein/DNA repair protein 71 49.89 0 82237..83613 - 458 16120424 cpxA YPO0073 - two-component sensor protein 72 49.93 0 83610..84308 - 232 16120425 cpxR YPO0074 - DNA-binding transcriptional regulator CpxR 73 46.63 0 84482..84970 + 162 16120426 cpxP YPO0075 - periplasmic stress adaptor protein CpxP 74 51.04 0 85648..86607 + 319 16120427 - YPO0076 - hypothetical protein 75 48.50 0 87169..88071 + 300 16120428 fieF YPO0077 - ferrous iron efflux protein F 76 47.15 0 88289..89272 + 327 16120429 pfkA YPO0078 - 6-phosphofructokinase 77 46.06 0 89493..90482 + 329 16120430 sbp1 YPO0079 - sulfate transporter subunit 78 48.23 0 90732..91550 - 272 16120431 - YPO0080 - hypothetical protein 79 44.61 0 91626..93053 - 475 16120432 - YPO0081 - putative membrane transport protein 80 54.06 +1 93119..93832 - 237 16120433 - YPO0082 - hypothetical protein 81 47.37 0 93829..94761 - 310 16120434 - YPO0083 - hypothetical protein 82 51.19 0 94892..95938 + 348 16120435 - YPO0084 - transcriptional regulator 83 48.96 0 96170..96937 - 255 16120436 tpiA YPO0085 - triosephosphate isomerase 84 45.13 0 97066..97701 - 211 16120437 - YPO0086 - hypothetical protein 85 51.95 0 97849..98283 + 144 16120438 - YPO0087 - hypothetical protein 86 52.07 0 98624..99370 - 248 16120439 fpr YPO0088 - ferredoxin-NADP reductase 87 50.88 0 101532..102380 - 282 16120440 glpF YPO0091 - glycerol uptake facilitator protein 88 39.17 -1 102390..102629 - 79 16120441 - YPO0092 - hypothetical protein 89 42.92 -1 103008..103247 + 79 16120442 - YPO0093 - hypothetical protein 90 45.75 0 103455..103913 - 152 16120443 tnp YPO0094 - transposase for the IS1541 insertion element 91 50.45 0 105645..106427 - 260 16120444 - YPO0096 - transposase/IS protein 92 52.59 0 106424..107446 - 340 16120445 - YPO0097 - transposase for insertion sequence IS100 93 38.83 -1 108358..109593 - 411 16120446 - YPO0099 - hypothetical protein 94 45.83 0 109863..110102 + 79 16120447 - YPO0100 - hypothetical protein 95 29.33 -2 110277..110426 + 49 16120448 - YPO0101 - hypothetical protein 96 53.16 +1 110732..111316 + 194 16120449 - YPO0102 - hypothetical protein 97 47.53 0 111433..111918 - 161 16120450 menG YPO0103 - ribonuclease activity regulator protein RraA 98 49.02 0 112060..112977 - 305 16120451 menA YPO0104 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 99 48.80 0 113213..114544 - 443 16120452 hslU YPO0105 - ATP-dependent protease ATP-binding subunit 100 48.76 0 114615..115139 - 174 16120453 hslV YPO0106 - ATP-dependent protease peptidase subunit 47.92 MEAN 4.90 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.