IslandPath Analysis: Nostoc punctiforme PCC 73102



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 42.28   STD DEV: 4.13
Nostoc punctiforme PCC 73102, complete genome - 1..8234322
6087 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 39.35	0	167..1546	+	459	186680551	-	Npun_F0001	-	chromosomal replication initiator protein DnaA
2	 33.16	-2	1766..2947	+	393	186680552	-	Npun_F0002	-	hypothetical protein
3	 42.52	0	3195..4685	-	496	186680553	-	Npun_R0003	-	glutamine synthetase, catalytic region
4	 43.55	0	5193..6053	-	286	186680554	-	Npun_R0004	-	aminotransferase, class I and II
5	 47.00	+1	6568..7167	+	199	186680555	-	Npun_F0005	-	hypothetical protein
6	 35.17	-1	7215..13253	-	2012	186680556	-	Npun_R0006	-	WD-40 repeat-containing protein
7	 40.15	0	13250..14554	-	434	186680557	-	Npun_R0007	-	hypothetical protein
8	 48.20	+1	15003..16226	+	407	186680558	-	Npun_F0008	-	riboflavin biosynthesis protein RibD
9	 46.58	+1	16269..16487	-	72	186680559	-	Npun_R0009	-	hypothetical protein
10	 38.30	0	16727..18235	-	502	186680560	-	Npun_R0010	-	hypothetical protein
11	 44.23	0	18584..20419	-	611	186680561	-	Npun_R0011	-	serine/threonine protein kinase
12	 41.31	0	20991..22043	-	350	186680562	-	Npun_R0012	-	hypothetical protein
13	 43.03	0	22525..24453	+	642	186680563	-	Npun_F0013	-	alpha amylase, catalytic region
14	 33.47	-2	24966..25703	+	245	186680564	-	Npun_F0014	-	hypothetical protein
15	 41.81	0	26198..26716	+	172	186680565	-	Npun_F0015	-	methyltransferase type 12
16	 37.65	-1	27085..27501	-	138	186680566	-	Npun_R0016	-	hypothetical protein
17	 42.52	0	27679..30159	+	826	186680567	-	Npun_F0017	-	phosphoenolpyruvate synthase
18	 42.73	0	30366..30908	+	180	186680568	-	Npun_F0018	-	GCN5-related N-acetyltransferase
19	 39.58	0	30967..32535	+	522	186680569	-	Npun_F0019	-	glycosyl transferase family protein
20	 41.53	0	32843..35149	+	768	186680570	-	Npun_F0020	-	multi-sensor signal transduction histidine kinase
21	 40.72	0	35094..35540	+	148	186680571	-	Npun_F0021	-	response regulator receiver protein
22	 42.18	0	35672..36835	+	387	186680572	-	Npun_F0022	-	response regulator receiver sensor signal transduction histidine kinase
23	 45.11	0	37054..37707	-	217	186680573	-	Npun_R0023	-	tRNA (guanine-N(7)-)-methyltransferase
24	 31.06	-2	38120..39568	+	482	186680574	-	Npun_F0024	-	pentapeptide repeat-containing protein
25	 47.82	+1	39862..42477	+	871	186680575	-	Npun_F0025	-	DNA gyrase, A subunit
26	 46.03	0	42449..44047	+	532	186680576	-	Npun_F0026	-	apolipoprotein N-acyltransferase
27	 35.71	-1	44126..44461	+	111	186680577	-	Npun_F0027	-	hypothetical protein
28	 45.27	0	45418..46422	-	334	186680578	-	Npun_R0029	-	transaldolase
29	 47.59	+1	46657..48087	-	476	186680579	-	Npun_R0030	-	pyruvate kinase
30	 45.50	0	48381..49424	-	347	186680580	-	Npun_R0031	-	glyceraldehyde-3-phosphate dehydrogenase, type I
31	 44.67	0	49663..50712	-	349	186680581	-	Npun_R0032	-	hypothetical protein
32	 46.31	0	51075..52661	-	528	186680582	-	Npun_R0033	-	radical SAM domain-containing protein
33	 43.04	0	53308..54471	-	387	186680583	-	Npun_R0034	-	DNA polymerase III, beta subunit
34	 43.22	0	54561..54833	-	90	186680584	-	Npun_R0035	-	hypothetical protein
35	 42.49	0	55369..55794	+	141	186680585	-	Npun_F0036	-	hypothetical protein
36	 41.25	0	56243..56962	+	239	186680586	-	Npun_F0037	-	4'-phosphopantetheinyl transferase, HetI
37	 39.18	0	57053..57856	-	267	186680587	-	Npun_R0038	-	short-chain dehydrogenase/reductase SDR
38	 39.74	0	58424..59938	-	504	186680588	-	Npun_R0039	-	polyketide synthase thioester reductase subunit HglB
39	 41.92	0	59941..61617	-	558	186680589	-	Npun_R0040	-	2-nitropropane dioxygenase, NPD
40	 41.92	0	61892..66640	-	1582	186680590	-	Npun_R0041	-	beta-ketoacyl synthase HglC
41	 40.05	0	66946..68673	-	575	186680591	-	Npun_R0042	-	KR
42	 45.03	0	68809..74142	-	1777	186680592	-	Npun_R0043	-	polyketide synthase phosphopantetheine-binding HglE
43	 42.93	0	76173..77381	+	402	186680593	-	Npun_F0044	-	secretion protein HlyD family protein, DevB
44	 38.11	-1	77441..78634	+	397	186680594	-	Npun_F0045	-	DevC protein
45	 38.01	-1	78842..79846	+	334	186680595	-	Npun_F0046	-	NAD-dependent epimerase/dehydratase
46	 39.43	0	80060..81043	+	327	186680596	-	Npun_F0047	-	glycosyl transferase family protein
47	 37.18	-1	81120..81587	+	155	186680597	-	Npun_F0048	-	hypothetical protein
48	 43.12	0	81723..83009	+	428	186680598	-	Npun_F0049	-	glycosyl transferase family protein
49	 41.63	0	83420..84697	+	425	186680599	-	Npun_F0050	-	glycosyl transferase, group 1
50	 47.29	+1	84760..85533	-	257	186680600	-	Npun_R0051	-	phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
51	 43.00	0	85588..85887	-	99	186680601	-	Npun_R0052	-	hypothetical protein
52	 42.86	0	85884..86219	-	111	186680602	-	Npun_R0053	-	hypothetical protein
53	 46.23	0	86418..87464	+	348	186680603	-	Npun_F0054	-	polysaccharide pyruvyl transferase
54	 36.48	-1	87614..89074	+	486	186680604	-	Npun_F0055	-	hypothetical protein
55	 46.54	+1	89226..90005	-	259	186680605	-	Npun_R0056	-	hypothetical protein
56	 42.49	0	90083..90901	+	272	186680606	-	Npun_F0057	-	biotin--acetyl-CoA-carboxylase ligase
57	 48.86	+1	90992..92569	+	525	186680607	-	Npun_F0058	-	peptidase M23B
58	 45.96	0	92670..93350	-	226	186680608	-	Npun_R0059	-	riboflavin synthase, alpha subunit
59	 45.78	0	93691..94188	+	165	186680609	-	Npun_F0060	-	hypothetical protein
60	 43.32	0	94338..95468	+	376	186680610	-	Npun_F0061	-	aldo/keto reductase
61	 43.20	0	95679..97442	+	587	186680611	-	Npun_F0062	-	ABC transporter related
62	 35.46	-1	97591..98013	-	140	186680612	-	Npun_R0063	-	hypothetical protein
63	 45.39	0	99008..102541	+	1177	186680613	-	Npun_F0065	-	methionine synthase
64	 41.82	0	103560..108260	+	1566	186680614	-	Npun_F0066	-	hypothetical protein
65	 44.79	0	108282..108962	+	226	186680615	-	Npun_F0067	-	hypothetical protein
66	 38.60	0	109090..110058	+	322	186680616	-	Npun_F0068	-	hypothetical protein
67	 40.63	0	110087..110785	+	232	186680617	-	Npun_F0069	-	PilA
68	 36.54	-1	110985..111950	+	321	186680618	-	Npun_F0070	-	glycosyl transferase family protein
69	 34.85	-1	111963..112952	+	329	186680619	-	Npun_F0071	-	glycosyl transferase family protein
70	 33.61	-2	112954..114030	+	358	186680620	-	Npun_F0072	-	glycosyl transferase family protein
71	 42.11	0	113996..114565	+	189	186680621	-	Npun_F0073	-	hypothetical protein
72	 46.76	+1	114623..115516	-	297	186680622	-	Npun_R0074	-	transposase, IS4 family protein
73	 43.21	0	115604..116251	+	215	186680623	-	Npun_F0075	-	hypothetical protein
74	 41.06	0	116386..117705	+	439	186680624	-	Npun_F0076	-	transposase, IS4 family protein
75	 43.89	0	118028..118870	+	280	186680625	-	Npun_F0077	-	hypothetical protein
76	 44.44	0	118995..119903	+	302	186680626	-	Npun_F0078	-	glycosyl transferase family protein
77	 43.53	0	120434..121198	+	254	186680627	-	Npun_F0079	-	hypothetical protein
78	 46.26	0	121321..121962	+	213	186680628	-	Npun_F0080	-	NusB antitermination factor
79	 45.32	0	122223..123866	+	547	186680629	-	Npun_F0081	-	signal recognition particle-docking protein FtsY
80	 45.11	0	125296..126687	+	463	186680630	-	Npun_F0082	-	serine phosphatase
81	 45.40	0	127265..128548	-	427	186680631	-	Npun_R0083	-	hypothetical protein
82	 45.01	0	128824..129294	+	156	186680632	-	Npun_F0084	-	hypothetical protein
83	 42.41	0	129352..130023	-	223	186680633	-	Npun_R0085	-	hypothetical protein
84	 45.00	0	130204..130863	+	219	186680634	-	Npun_F0086	-	NmrA family protein
85	 43.32	0	131099..131749	+	216	186680635	-	Npun_F0087	-	glycoside hydrolase family protein
86	 30.65	-2	131764..132582	-	272	186680636	-	Npun_R0088	-	alpha/beta hydrolase fold protein
87	 42.29	0	132814..133215	-	133	186680637	-	Npun_R0089	-	hypothetical protein
88	 39.30	0	133573..134778	-	401	186680638	-	Npun_R0090	-	hypothetical protein
89	 43.76	0	134778..135410	-	210	186680639	-	Npun_R0091	-	hypothetical protein
90	 41.00	0	135578..137182	-	534	186680640	-	Npun_R0092	-	methionyl-tRNA synthetase
91	 45.73	0	137562..138287	+	241	186680641	-	Npun_F0093	-	phospholipid/glycerol acyltransferase
92	 43.84	0	138401..139228	+	275	186680642	-	Npun_F0094	-	alpha/beta hydrolase fold protein
93	 42.56	0	139339..139533	+	64	186680643	-	Npun_F0095	-	hypothetical protein
94	 40.87	0	139694..140860	+	388	186680644	-	Npun_F0096	-	hypothetical protein
95	 45.75	0	141455..142936	+	493	186680645	-	Npun_F0097	-	peptidase M17, leucyl aminopeptidase domain-containing protein
96	 48.00	+1	143263..144285	+	340	186680646	-	Npun_F0098	-	fatty acid/phospholipid synthesis protein PlsX
97	 46.22	0	144405..145397	+	330	186680647	-	Npun_F0099	-	3-oxoacyl-(acyl-carrier-protein) synthase III
98	 43.28	0	145662..146546	+	294	186680648	-	Npun_F0100	-	malonyl CoA-acyl carrier protein transacylase
99	 45.87	0	146984..147661	+	225	186680649	-	Npun_F0101	-	1-acyl-sn-glycerol-3-phosphate acyltransferase
100	 35.16	-1	148141..149178	+	345	186680650	-	Npun_F0102	-	hypothetical protein
42.28	MEAN

4.13	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.