IslandPath Analysis: Burkholderia multivorans ATCC 17616



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 67.07   STD DEV: 4.14
Burkholderia multivorans ATCC 17616 chromosome 2, complete sequence - 1..2472928
2152 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 65.88	0	40..1053	+	337	161519707	-	Bmul_3158	-	integrase family protein
2	 64.89	0	1194..2375	-	393	161519708	-	Bmul_3159	-	hypothetical protein
3	 64.69	0	4198..5562	+	454	161519709	-	Bmul_3160	-	hypothetical protein
4	 62.99	0	5641..6702	-	353	161519710	-	Bmul_3161	-	parB-like partition protein
5	 60.18	-1	6726..7388	-	220	161519711	-	Bmul_3162	-	cobyrinic acid ac-diamide synthase
6	 61.94	-1	8535..8894	+	119	161519712	-	Bmul_3163	-	arsenate reductase
7	 71.43	+1	8968..9135	+	55	161519713	-	Bmul_3164	-	hypothetical protein
8	 68.59	0	9304..9771	-	155	161519714	-	Bmul_3165	-	hypothetical protein
9	 63.77	0	9787..10338	+	183	161519715	-	Bmul_3166	-	NADPH-dependent FMN reductase
10	 67.02	0	10396..12672	-	758	161519716	-	Bmul_3167	-	integral membrane sensor hybrid histidine kinase
11	 59.35	-1	13104..13472	+	122	161519717	-	Bmul_3168	-	response regulator receiver protein
12	 68.46	0	13477..14091	+	204	161519718	-	Bmul_3169	-	CheC, inhibitor of MCP methylation
13	 68.90	0	14088..15026	+	312	161519719	-	Bmul_3170	-	diguanylate cyclase with PAS/PAC sensor
14	 70.62	0	15060..15944	-	294	161519720	-	Bmul_3171	-	alpha/beta hydrolase fold
15	 69.67	0	16157..16489	+	110	161519721	-	Bmul_3172	-	hypothetical protein
16	 68.55	0	16779..17627	+	282	161519722	-	Bmul_3173	-	squalene synthase HpnD
17	 74.56	+1	17632..18885	+	417	161519723	-	Bmul_3174	-	squalene-associated FAD-dependent desaturase
18	 67.53	0	18897..20870	+	657	161519724	-	Bmul_3175	-	squalene-hopene cyclase
19	 75.04	+1	20876..21580	+	234	161519725	-	Bmul_3176	-	hypothetical protein
20	 62.09	-1	21845..23809	+	654	161519726	-	Bmul_3177	-	type VI secretion protein
21	 63.93	0	23880..29825	+	1981	161519727	-	Bmul_3178	-	type VI secretion system Vgr family protein
22	 45.79	-2	32441..32737	+	98	161519728	-	Bmul_3179	-	hypothetical protein
23	 67.45	0	34280..34534	+	84	161519729	-	Bmul_3180	-	hypothetical protein
24	 65.18	0	34545..35486	+	313	161519730	-	Bmul_3181	-	hypothetical protein
25	 63.66	0	35515..39468	+	1317	161519731	-	Bmul_3182	-	type VI secretion protein IcmF
26	 69.63	0	39498..40511	-	337	161519732	-	Bmul_3183	-	VacJ family lipoprotein
27	 69.17	0	40504..43137	-	877	161519733	-	Bmul_3184	-	hopanoid biosynthesis associated RND transporter like protein HpnN
28	 66.16	0	43456..44052	+	198	161519734	-	Bmul_3185	-	toluene tolerance family protein
29	 68.68	0	44225..44869	-	214	161519735	-	Bmul_3186	-	two component LuxR family transcriptional regulator
30	 70.43	0	44897..46276	-	459	161519736	-	Bmul_3187	-	integral membrane sensor signal transduction histidine kinase
31	 68.87	0	46394..47983	-	529	161519737	-	Bmul_3188	-	diguanylate cyclase
32	 68.69	0	48445..50619	-	724	161519738	-	Bmul_3189	-	malate synthase G
33	 72.84	+1	50654..51058	-	134	161519739	-	Bmul_3190	-	hypothetical protein
34	 71.40	+1	51641..53119	+	492	161519740	-	Bmul_3191	-	2-nitropropane dioxygenase NPD
35	 69.75	0	53135..54139	-	334	161519741	-	Bmul_3192	-	CheB methylesterase
36	 67.25	0	54294..58436	-	1380	161519742	-	Bmul_3193	-	signal transduction histidine kinase with CheB and CheR activity
37	 65.49	0	58763..59614	-	283	161519743	-	Bmul_3194	-	binding-protein-dependent transport systems inner membrane component
38	 67.41	0	59631..60569	-	312	161519744	-	Bmul_3195	-	binding-protein-dependent transport systems inner membrane component
39	 66.03	0	60623..61882	-	419	161519745	-	Bmul_3196	-	extracellular solute-binding protein
40	 70.29	0	61956..63941	-	661	161519746	-	Bmul_3197	-	Beta-galactosidase
41	 70.93	0	63951..65099	-	382	161519747	-	Bmul_3198	-	ABC transporter related
42	 72.76	+1	65287..66303	+	338	161519748	-	Bmul_3199	-	LacI family transcription regulator
43	 67.85	0	66364..68469	-	701	161519749	-	Bmul_3200	-	TonB-dependent siderophore receptor
44	 69.93	0	68941..69891	-	316	161519750	-	Bmul_3201	-	LysR family transcriptional regulator
45	 67.81	0	70006..71757	+	583	161519751	-	Bmul_3202	-	dihydroxy-acid dehydratase
46	 71.17	0	71872..73248	+	458	161519752	-	Bmul_3203	-	major facilitator transporter
47	 69.03	0	73279..74208	+	309	161519753	-	Bmul_3204	-	dihydrodipicolinate synthetase
48	 71.72	+1	74231..75160	+	309	161519754	-	Bmul_3205	-	galactose 1-dehydrogenase
49	 67.06	0	75229..76233	+	334	161519755	-	Bmul_3206	-	monosaccharide-transporting ATPase
50	 70.03	0	76254..77801	+	515	161519756	-	Bmul_3207	-	L-arabinose transporter ATP-binding protein
51	 66.96	0	77839..78858	+	339	161519757	-	Bmul_3208	-	L-arabinose transporter permease protein
52	 71.96	+1	78898..79803	+	301	161519758	-	Bmul_3209	-	SMP-30/gluconolaconase/LRE domain-containing protein
53	 64.37	0	80217..81044	+	275	161519759	-	Bmul_3210	-	p-hydroxycinnamoyl CoA hydratase/lyase
54	 71.49	+1	81097..82548	+	483	161519760	-	Bmul_3211	-	aldehyde dehydrogenase
55	 70.10	0	82649..84571	+	640	161519761	-	Bmul_3212	-	feruloyl-CoA synthase
56	 69.76	0	84716..85750	-	344	161519762	-	Bmul_3213	-	ferredoxin
57	 67.43	0	85806..86849	-	347	161519763	-	Bmul_3214	-	Rieske (2Fe-2S) domain-containing protein
58	 73.41	+1	86938..87708	-	256	161519764	-	Bmul_3215	-	GntR family transcriptional regulator
59	 70.86	0	87957..88481	+	174	161519765	-	Bmul_3216	-	MarR family transcriptional regulator
60	 71.14	0	88759..89964	+	401	161519766	-	Bmul_3217	-	putative 3-hydroxyphenylpropionic transporter MhpT
61	 70.14	0	90048..91169	+	373	161519767	-	Bmul_3218	-	porin
62	 69.05	0	91193..92911	+	572	161519768	-	Bmul_3219	-	tannase and feruloyl esterase
63	 69.17	0	93012..94370	-	452	161519769	-	Bmul_3220	-	aminotransferase
64	 68.42	0	94705..96702	+	665	161519770	-	Bmul_3221	-	glycoside hydrolase family protein
65	 67.46	0	96758..97264	-	168	161519771	-	Bmul_3222	-	GCN5-related N-acetyltransferase
66	 67.89	0	97657..98475	-	272	161519772	-	Bmul_3223	-	17 kDa surface antigen
67	 72.42	+1	98651..99850	+	399	161519773	-	Bmul_3224	-	cytosine deaminase
68	 71.81	+1	99942..101126	+	394	161519774	-	Bmul_3225	-	cytosine deaminase
69	 67.86	0	101200..102120	-	306	161519775	-	Bmul_3226	-	LysR family transcriptional regulator
70	 65.14	0	102518..103303	+	261	161519776	-	Bmul_3227	-	extracellular solute-binding protein
71	 68.19	0	103336..104187	+	283	161519777	-	Bmul_3228	-	phytanoyl-CoA dioxygenase
72	 67.75	0	104254..104991	-	245	161519778	-	Bmul_3229	-	histidine utilization repressor
73	 71.63	+1	105034..105798	-	254	161519779	-	Bmul_3230	-	short chain dehydrogenase
74	 70.34	0	106063..106770	+	235	161519780	-	Bmul_3231	-	hypothetical protein
75	 67.64	0	106833..107963	+	376	161519781	-	Bmul_3232	-	phospho-2-dehydro-3-deoxyheptonate aldolase
76	 67.37	0	108207..108635	+	142	161519782	-	Bmul_3233	-	PRC-barrel domain-containing protein
77	 69.41	0	108664..109209	+	181	161519783	-	Bmul_3234	-	hypothetical protein
78	 68.43	0	109290..110426	+	378	161519784	-	Bmul_3235	-	muconate and chloromuconate cycloisomerase
79	 62.20	-1	110461..110751	+	96	161519785	-	Bmul_3236	-	muconolactone delta-isomerase
80	 67.52	0	110817..111752	+	311	161519786	-	Bmul_3237	-	catechol 1,2-dioxygenase
81	 63.43	0	111846..113204	+	452	161519787	-	Bmul_3238	-	Rieske (2Fe-2S) domain-containing protein
82	 61.96	-1	113201..113689	+	162	161519788	-	Bmul_3239	-	benzoate 1,2-dioxygenase, small subunit
83	 65.69	0	113725..114753	+	342	161519789	-	Bmul_3240	-	oxidoreductase FAD/NAD(P)-binding subunit
84	 70.40	0	114750..115526	+	258	161519790	-	Bmul_3241	-	1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
85	 66.17	0	115618..116016	+	132	161519791	-	Bmul_3242	-	endoribonuclease L-PSP
86	 71.94	+1	116096..117442	+	448	161519792	-	Bmul_3243	-	major facilitator transporter
87	 65.30	0	117467..118417	-	316	161519793	-	Bmul_3244	-	LysR family transcriptional regulator
88	 66.23	0	118761..120839	+	692	161519794	-	Bmul_3245	-	carbon starvation protein CstA
89	 66.18	0	120853..121059	+	68	161519795	-	Bmul_3246	-	hypothetical protein
90	 64.25	0	121211..121831	+	206	161519796	-	Bmul_3247	-	hemolysin III family channel protein
91	 68.04	0	121866..122303	-	145	161519797	-	Bmul_3248	-	hypothetical protein
92	 63.56	0	122435..122788	-	117	161519798	-	Bmul_3249	-	DOPA 45-dioxygenase
93	 66.40	0	123260..123637	+	125	161519799	-	Bmul_3250	-	hypothetical protein
94	 69.73	0	123861..124349	+	162	161519800	-	Bmul_3251	-	hypothetical protein
95	 63.57	0	124540..125700	-	386	161519801	-	Bmul_3252	-	hopanoid biosynthesis associated radical SAM protein HpnH
96	 66.45	0	125713..126654	-	313	161519802	-	Bmul_3253	-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
97	 66.67	0	126813..127055	+	80	161519803	-	Bmul_3254	-	hypothetical protein
98	 71.80	+1	127052..128239	+	395	161519804	-	Bmul_3255	-	hopene-associated glycosyltransferase HpnB
99	 71.35	+1	128338..129639	-	433	161519805	-	Bmul_3256	-	hypothetical protein
100	 70.34	0	129748..130755	-	335	161519806	-	Bmul_3257	-	hopanoid-associated sugar epimerase
67.07	MEAN

4.14	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.