IslandPath Analysis: Methylobacillus flagellatus KT



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 55.83   STD DEV: 4.40
Methylobacillus flagellatus KT, complete genome - 1..2971517
2753 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 53.29	0	46..1458	+	470	91774357	-	Mfla_0001	-	chromosomal replication initiator protein DnaA
2	 47.64	-1	1688..2791	+	367	91774358	-	Mfla_0002	-	DNA polymerase III, beta subunit
3	 52.82	0	2842..5238	+	798	91774359	-	Mfla_0003	-	DNA gyrase subunit B
4	 50.98	-1	5339..5695	-	118	91774360	-	Mfla_0004	-	hypothetical protein
5	 55.34	0	5940..7475	+	511	91774361	-	Mfla_0005	-	sulphate transporter
6	 54.69	0	7510..9714	-	734	91774362	-	Mfla_0006	-	glycoside hydrolase family protein
7	 55.07	0	9895..10377	-	160	91774363	-	Mfla_0007	-	cyclase/dehydrase
8	 59.41	0	10708..11865	-	385	91774364	-	Mfla_0008	-	DNA-directed DNA polymerase
9	 56.19	0	12327..13223	+	298	91774365	-	Mfla_0009	-	hypothetical protein
10	 53.27	0	13273..13578	-	101	91774366	-	Mfla_0010	-	transport-associated
11	 59.77	0	14184..15662	-	492	91774367	-	Mfla_0011	-	malate:quinone oxidoreductase
12	 58.12	0	15747..16097	-	116	91774368	-	Mfla_0012	-	hypothetical protein
13	 58.78	0	16108..16500	-	130	91774369	-	Mfla_0013	-	protein-methionine-S-oxide reductase
14	 51.03	-1	16519..16953	+	144	91774370	-	Mfla_0014	-	hypothetical protein
15	 57.36	0	16943..17404	+	153	91774371	-	Mfla_0015	-	GCN5-related N-acetyltransferase
16	 51.28	-1	17526..17798	-	90	91774372	-	Mfla_0016	-	nucleoid protein HU beta subunit
17	 51.70	0	18005..18151	-	48	91774373	-	Mfla_0017	-	hypothetical protein
18	 53.24	0	18804..20054	+	416	91774374	-	Mfla_0018	-	MscS mechanosensitive ion channel
19	 56.69	0	20028..21260	-	410	91774375	-	Mfla_0019	-	CBS domain-containing protein
20	 52.06	0	21283..22275	+	330	91774376	-	Mfla_0020	-	LysR family transcriptional regulator
21	 47.17	-1	22396..22554	-	52	91774377	-	Mfla_0021	-	coenzyme PQQ biosynthesis protein A
22	 58.56	0	22690..23688	-	332	91774378	-	Mfla_0022	-	Zinc finger/thioredoxin putative
23	 59.23	0	23698..24585	-	295	91774379	-	Mfla_0023	-	50S ribosomal protein L11P methyltransferase
24	 56.22	0	24585..25934	-	449	91774380	-	Mfla_0024	-	biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
25	 57.89	0	25946..26401	-	151	91774381	-	Mfla_0025	-	biotin carboxyl carrier protein
26	 52.94	0	26434..26892	-	152	91774382	-	Mfla_0026	-	3-dehydroquinate dehydratase
27	 53.41	0	27022..27579	-	185	91774383	-	Mfla_0027	-	alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
28	 58.55	0	27563..29434	-	623	91774384	-	Mfla_0028	-	protein-disulfide reductase
29	 54.31	0	29431..29778	-	115	91774385	-	Mfla_0029	-	CutA1 divalent ion tolerance protein
30	 57.34	0	29795..30223	+	142	91774386	-	Mfla_0030	-	FxsA cytoplasmic membrane protein
31	 56.75	0	30288..31316	+	342	91774387	-	Mfla_0031	-	CDP-6-deoxy-delta-3,4-glucoseen reductase
32	 58.63	0	31368..32549	-	393	91774388	-	Mfla_0032	-	HemY-like protein
33	 56.41	0	32549..33640	-	363	91774389	-	Mfla_0033	-	protein of unknown function DUF513, hemX
34	 57.59	0	33633..34403	-	256	91774390	-	Mfla_0034	-	uroporphyrinogen-III synthase
35	 62.70	+1	34442..35374	-	310	91774391	hemC	Mfla_0035	-	porphobilinogen deaminase
36	 60.51	+1	35473..36219	-	248	91774392	-	Mfla_0036	-	LytR/AlgR family transcriptional regulator
37	 57.87	0	36216..37238	-	340	91774393	-	Mfla_0037	-	histidine kinase internal region
38	 59.42	0	37294..38700	+	468	91774394	-	Mfla_0038	-	argininosuccinate lyase
39	 55.11	0	38751..40316	-	521	91774395	-	Mfla_0039	-	diguanylate cyclase
40	 59.39	0	40461..41615	-	384	91774396	-	Mfla_0040	-	coproporphyrinogen III oxidase, anaerobic
41	 52.56	0	41647..41880	-	77	91774397	-	Mfla_0041	-	hypothetical protein
42	 59.11	0	41877..42485	-	202	91774398	-	Mfla_0042	-	Ham1-like protein
43	 60.81	+1	42485..43201	-	238	91774399	-	Mfla_0043	-	ribonuclease PH
44	 58.41	0	43303..44223	-	306	91774400	-	Mfla_0044	-	protein serine/threonine phosphatases
45	 55.42	0	44245..45204	-	319	91774401	-	Mfla_0045	-	serine/threonine protein kinase
46	 56.75	0	45295..46161	+	288	91774402	-	Mfla_0046	-	hypothetical protein
47	 55.97	0	46227..47273	+	348	91774403	-	Mfla_0047	-	hypothetical protein
48	 55.50	0	47308..47916	+	202	91774404	-	Mfla_0048	-	guanylate kinase
49	 58.69	0	47970..48182	+	70	91774405	-	Mfla_0049	-	DNA-directed RNA polymerase, omega subunit
50	 56.95	0	48286..50508	+	740	91774406	-	Mfla_0050	-	(p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
51	 56.59	0	50558..50944	+	128	91774407	-	Mfla_0051	-	endoribonuclease L-PSP
52	 61.33	+1	51079..53139	+	686	91774408	-	Mfla_0052	-	ATP-dependent DNA helicase RecG
53	 58.47	0	53179..53715	+	178	91774409	-	Mfla_0053	-	chorismate lyase
54	 53.87	0	53731..54621	+	296	91774410	-	Mfla_0054	-	4-hydroxybenzoate octaprenyltransferase
55	 51.02	-1	54718..55158	+	146	91774411	rplM	Mfla_0055	-	50S ribosomal protein L13
56	 54.96	0	55171..55563	+	130	91774412	-	Mfla_0056	-	SSU ribosomal protein S9P
57	 58.40	0	55702..56754	+	350	91774413	argC	Mfla_0057	-	N-acetyl-gamma-glutamyl-phosphate reductase
58	 50.80	-1	56762..57511	+	249	91774414	-	Mfla_0058	-	hypothetical protein
59	 52.81	0	57603..57905	+	100	91774415	-	Mfla_0059	-	hypothetical protein
60	 49.44	-1	57960..58313	+	117	91774416	-	Mfla_0060	-	HesB/YadR/YfhF
61	 52.67	0	58397..59689	-	430	91774417	-	Mfla_0061	-	citrate synthase
62	 53.52	0	59725..60804	-	359	91774418	anmK	Mfla_0062	-	anhydro-N-acetylmuramic acid kinase
63	 51.60	0	60831..62177	-	448	91774419	-	Mfla_0063	-	peptidase M23B
64	 52.33	0	62289..63488	+	399	91774420	-	Mfla_0064	-	tyrosyl-tRNA synthetase
65	 45.75	-2	69562..69996	+	144	91774421	-	Mfla_0065	-	hypothetical protein
66	 52.69	0	70023..71489	+	488	91774422	nusA	Mfla_0066	-	transcription elongation factor NusA
67	 53.93	0	71564..74287	+	907	91774423	-	Mfla_0067	-	translation initiation factor 2
68	 52.12	0	74291..74668	+	125	91774424	-	Mfla_0068	-	ribosome-binding factor A
69	 52.37	0	74684..75592	+	302	91774425	-	Mfla_0069	-	tRNA pseudouridine synthase B
70	 47.41	-1	75757..76026	+	89	91774426	-	Mfla_0070	-	SSU ribosomal protein S15P
71	 52.59	0	76119..78263	+	714	91774427	-	Mfla_0071	-	polynucleotide phosphorylase/polyadenylase
72	 47.75	-1	78463..78885	-	140	91774428	-	Mfla_0072	-	TraR/DksA family transcriptional regulator
73	 53.91	0	79015..79884	-	289	91774429	-	Mfla_0073	-	methenyltetrahydrofolate cyclohydrolase
74	 54.96	0	80355..81806	+	483	91774430	-	Mfla_0074	-	two component, sigma54 specific, Fis family transcriptional regulator
75	 56.10	0	81806..83149	+	447	91774431	-	Mfla_0075	-	general secretion pathway protein, ATPase
76	 54.88	0	83466..85085	+	539	91774432	-	Mfla_0076	-	type II and III secretion system protein
77	 57.80	0	85069..86241	+	390	91774433	-	Mfla_0077	-	TPR repeat-containing protein
78	 58.38	0	86352..88016	+	554	91774434	-	Mfla_0078	-	type II secretion system protein E
79	 54.81	0	88028..89233	+	401	91774435	-	Mfla_0079	-	type II secretion system protein
80	 55.17	0	89238..90812	+	524	91774436	-	Mfla_0080	-	hypothetical protein
81	 57.56	0	90809..91423	+	204	91774437	-	Mfla_0081	-	hypothetical protein
82	 59.63	0	91420..91902	+	160	91774438	-	Mfla_0082	-	hypothetical protein
83	 43.43	-2	91904..93409	+	501	91774439	-	Mfla_0083	-	hypothetical protein
84	 43.82	-2	93410..94153	+	247	91774440	-	Mfla_0084	-	methylation
85	 58.86	0	94206..94961	+	251	91774441	-	Mfla_0085	-	UBA/THIF-type NAD/FAD binding fold
86	 56.03	0	94996..95841	-	281	91774442	-	Mfla_0086	-	SPFH domain-containing protein/band 7 family protein
87	 57.17	0	95861..96313	-	150	91774443	-	Mfla_0087	-	hypothetical protein
88	 54.25	0	96448..97083	+	211	91774444	-	Mfla_0088	-	hypothetical protein
89	 57.50	0	97271..97837	+	188	91774445	-	Mfla_0089	-	hypothetical protein
90	 59.98	0	97855..98766	+	303	91774446	-	Mfla_0090	-	hypothetical protein
91	 59.71	0	98809..101640	+	943	91774447	valS	Mfla_0091	-	valyl-tRNA synthetase
92	 55.92	0	101675..102577	+	300	91774448	-	Mfla_0092	-	hypothetical protein
93	 53.41	0	102604..102852	-	82	91774449	-	Mfla_0093	-	SirA-like protein
94	 57.36	0	102852..103184	-	110	91774450	-	Mfla_0094	-	rhodanese-like protein
95	 54.29	0	103311..105782	+	823	91774451	-	Mfla_0095	-	TonB-dependent siderophore receptor
96	 55.56	0	105846..106376	+	176	91774452	-	Mfla_0096	-	putative hydroxylase
97	 58.56	0	106509..107273	+	254	91774453	-	Mfla_0097	-	Sel1
98	 59.36	0	107574..108641	+	355	91774454	-	Mfla_0098	-	nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
99	 60.00	0	108638..109402	+	254	91774455	-	Mfla_0099	-	cobalamin-5'-phosphate synthase
100	 57.99	0	109403..109978	+	191	91774456	-	Mfla_0100	-	phosphoglycerate mutase
55.83	MEAN

4.40	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.