IslandPath Analysis: Mesoplasma florum L1



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 26.81   STD DEV: 3.79
Mesoplasma florum L1, complete genome - 1..793224
682 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 24.55	0	1..1332	+	443	50364816	-	Mfl001	-	chromosomal replication initiator protein
2	 22.99	-1	1560..2681	+	373	50364817	-	Mfl002	-	DNA polymerase III, beta chain
3	 25.23	0	2708..3682	-	324	50364818	-	Mfl003	-	actin-like protein
4	 21.40	-1	3751..4278	+	175	50364819	-	Mfl004	-	nucleotidyltransferase, primase
5	 24.38	0	4280..5083	+	267	50364820	ksgA	Mfl005	-	dimethyladenosine transferase
6	 33.07	+1	5302..7209	+	635	50364821	-	Mfl006	-	DNA gyrase subunit B
7	 31.44	+1	7236..9713	+	825	50364822	-	Mfl007	-	DNA gyrase subunit A
8	 27.71	0	9837..12362	+	841	50364823	-	Mfl008	-	beta-glucoside PTS system IIABC component
9	 28.48	0	12376..13839	+	487	50364824	-	Mfl009	-	beta-glucosidase
10	 22.45	-1	13898..14632	+	244	50364825	-	Mfl010	-	putative transcriptional regulator
11	 28.53	0	14854..16248	+	464	50364826	-	Mfl011	-	beta-glucosidase
12	 27.77	0	16264..17718	+	484	50364827	-	Mfl012	-	beta-glucosidase
13	 26.14	0	17728..18645	+	305	50364828	-	Mfl013	-	transcriptional regulator/sugar kinase
14	 25.83	0	18681..20039	-	452	50364829	trmE	Mfl014	-	tRNA modification GTPase TrmE
15	 29.76	0	20111..21676	-	521	50364830	-	Mfl015	-	arginine-ornithine APC transporter
16	 28.07	0	21759..23372	-	537	50364831	-	Mfl016	-	putrescine/ornithine APC transporter
17	 28.84	0	23458..24726	-	422	50364832	-	Mfl017	-	seryl-tRNA synthetase
18	 26.04	0	24875..25738	+	287	50364833	-	Mfl018	-	putative hsp33 redox-regulated chaperone
19	 28.60	0	25861..27675	+	604	50364834	-	Mfl019	-	glutamine ABC transporter
20	 28.95	0	27767..29887	+	706	50364835	-	Mfl020	-	unknown lipoprotein
21	 25.71	0	30126..30965	+	279	50364836	-	Mfl021	-	unknown lipoprotein
22	 29.79	0	31149..31826	+	225	50364837	-	Mfl022	-	unknown lipoprotein
23	 29.49	0	32116..34194	+	692	50364838	-	Mfl023	-	sn-glycerol-3-phosphate ABC transporter periplasmic binding component
24	 22.90	-1	34226..36583	+	785	50364839	-	Mfl024	-	sn-glycerol-3-phosphate ABC transporter ATP-binding component
25	 28.28	0	36576..37565	+	329	50364840	-	Mfl025	-	sn-glycerol-3-phosphate ABC transporter permease component
26	 25.64	0	37574..38899	+	441	50364841	-	Mfl026	-	sn-glycerol-3-phosphate ABC transporter permease component
27	 29.29	0	38899..40035	+	378	50364842	-	Mfl027	-	DNA uptake protein
28	 26.42	0	40145..40462	+	105	50364843	-	Mfl028	-	hypothetical protein
29	 31.29	+1	40465..41442	+	325	50364844	-	Mfl029	-	tRNA dihydrouridine synthetase
30	 31.00	+1	41444..42943	+	499	50364845	-	Mfl030	-	lysyl tRNA synthetase
31	 28.61	0	42979..43698	-	239	50364846	-	Mfl031	-	putative 6-phosphogluconolactonase
32	 24.38	0	43810..44535	+	241	50364847	-	Mfl032	-	putative transcriptional regulator
33	 29.26	0	44649..47225	+	858	50364848	-	Mfl033	-	beta-glucoside PTS system IIABC component
34	 27.13	0	47227..48678	+	483	50364849	-	Mfl034	-	6-phospho-beta-glucosidase
35	 25.84	0	48712..49365	-	217	50364850	-	Mfl035	-	unknown transporter protein
36	 26.21	0	49572..51101	+	509	50364851	-	Mfl036	-	methionyl-tRNA synthetase
37	 30.83	+1	51298..52656	+	452	50364852	-	Mfl037	-	NADH oxidase
38	 25.27	0	52658..53662	+	334	50364853	-	Mfl038	-	lipoate-protein ligase
39	 32.70	+1	53676..54788	+	370	50364854	-	Mfl039	-	pyruvate dehydrogenase E1 alpha subunit
40	 34.34	+1	54788..55777	+	329	50364855	-	Mfl040	-	pyruvate dehydrogenase E1 beta subunit
41	 32.15	+1	55798..57066	+	422	50364856	-	Mfl041	-	branched-chain alpha-keto acid dehydrogenase subunit E2
42	 32.39	+1	57082..58890	+	602	50364857	-	Mfl042	-	dihydrolipate dehydrogenase
43	 30.96	+1	58892..59860	+	322	50364858	-	Mfl043	-	phosphate acetyltransferase
44	 29.05	0	59862..61052	+	396	50364859	-	Mfl044	-	acetate kinase
45	 27.72	0	61126..61926	+	266	50364860	-	Mfl045	-	1-pyrroline-5-carboxylate reductase
46	 29.83	0	61953..62552	-	199	50364861	-	Mfl046	-	acyl carrier protein phosphodiesterase
47	 26.22	0	62639..63439	+	266	50364862	-	Mfl047	-	Mg2+ dependent DNAse
48	 29.29	0	63482..64273	+	263	50364863	-	Mfl048	-	Mg2+ dependent DNAse
49	 20.56	-1	64526..64846	+	106	50364864	-	Mfl049	-	hypothetical protein
50	 24.80	0	64863..65354	-	163	50364865	-	Mfl050	-	methionine sulfoxide reductase A
51	 28.76	0	65344..65649	-	101	50364866	-	Mfl051	-	MarR family transcriptional regulator
52	 26.17	0	65768..66367	+	199	50364867	-	Mfl052	-	acyl carrier protein phosphodiesterase
53	 31.06	+1	66405..67943	-	512	50364868	-	Mfl053	-	multidrug ABC transporter ATP-binding component
54	 26.36	0	68213..68800	-	195	50364869	-	Mfl054	-	unknown transmembrane protein
55	 28.83	0	68965..69918	-	317	50364870	-	Mfl055	-	5'-3' exonuclease
56	 25.89	0	69977..70675	-	232	50364871	-	Mfl056	-	putative proline dipeptidase
57	 30.33	0	70615..73446	+	943	50364872	secA	Mfl057	-	preprotein translocase subunit SecA
58	 29.11	0	73663..75510	+	615	50364873	-	Mfl058	-	excinuclease ABC subunit B
59	 29.47	0	75510..78359	+	949	50364874	-	Mfl059	-	repair endonuclease subunit A
60	 24.30	0	78343..79449	+	368	50364875	-	Mfl060	-	putative folyl-polyglutamate synthetase
61	 25.63	0	79465..80139	+	224	50364876	-	Mfl061	-	unknown transporter protein
62	 27.22	0	80225..81157	+	310	50364877	-	Mfl062	-	HPr kinase/phosphorylase
63	 27.02	0	81165..82763	+	532	50364878	-	Mfl063	-	prolipoprotein diacylglyceryl transferase
64	 31.62	+1	82747..83682	+	311	50364879	-	Mfl064	-	thioredoxin reductase NADPH
65	 29.10	0	83711..85105	+	464	50364880	-	Mfl065	-	prolipoprotein diacylglyceryl transferase
66	 25.47	0	85127..86080	+	317	50364881	-	Mfl066	-	hypothetical protein
67	 26.58	0	86140..86376	+	78	50364882	-	Mfl067	-	Cro/CI family transcriptional regulator
68	 25.84	0	86448..86714	+	88	50364883	secG	Mfl068	-	preprotein translocase subunit SecG
69	 25.30	0	86739..90299	+	1186	50364884	-	Mfl069	-	unknown substrate ABC transporter permease component
70	 28.51	0	90315..91661	+	448	50364885	-	Mfl070	-	cytosol aminopeptidase (leucine aminopeptidase)
71	 30.51	0	91753..93096	+	447	50364886	-	Mfl071	-	cytosol aminopeptidase (leucine aminopeptidase)
72	 27.93	0	93151..94500	+	449	50364887	-	Mfl072	-	cytosol aminopeptidase (leucine aminopeptidase)
73	 25.48	0	94551..95225	+	224	50364888	-	Mfl073	-	hypothetical protein
74	 29.61	0	95430..96719	+	429	50364889	-	Mfl074	-	adenylosuccinate synthetase
75	 25.17	0	96737..98035	+	432	50364890	-	Mfl075	-	adenylosuccinate lyase
76	 29.98	0	98070..99113	+	347	50364891	-	Mfl076	-	phosphoribosylpyrophosphate synthetase
77	 27.63	0	99130..99690	+	186	50364892	-	Mfl077	-	peptidyl-tRNA hydrolase
78	 24.35	0	99704..100627	-	307	50364893	-	Mfl078	-	S-adenosylmethionine:2-demethylmenaquinone methyltransferase
79	 24.33	0	100698..102107	+	469	50364894	-	Mfl079	-	unknown transmembrane protein
80	 29.78	0	102862..103734	+	290	50364895	rpsF	Mfl080	-	30S ribosomal protein S6
81	 28.51	0	103797..104252	+	151	50364896	-	Mfl081	-	single-stranded DNA-binding protein
82	 27.71	0	104279..104509	+	76	50364897	rpsR	Mfl082	-	30S ribosomal protein S18
83	 23.42	0	104645..105088	+	147	50364898	rplI	Mfl083	-	50S ribosomal protein L9
84	 29.70	0	105090..106436	+	448	50364899	-	Mfl084	-	DNA replication priming helicase
85	 27.34	0	106502..107935	+	477	50364900	-	Mfl085	-	unknown lipoprotein
86	 27.45	0	108041..108958	+	305	50364901	-	Mfl086	-	Glu-tRNA amidotransferase subunit C
87	 22.10	-1	108974..110299	+	441	50364902	-	Mfl087	-	cysteinyl-tRNA synthetase
88	 25.79	0	110301..111029	+	242	50364903	-	Mfl088	-	rRNA methylase
89	 24.24	0	111107..111271	+	54	50364904	rpmG	Mfl089	-	50S ribosomal protein L33
90	 20.35	-1	111271..111609	+	112	50364905	-	Mfl090	-	preprotein translocase
91	 30.32	0	111621..112250	+	209	50364906	-	Mfl091	-	transcription antitermination factor
92	 27.46	0	112385..114139	+	584	50364907	-	Mfl092	-	putative metallo-beta lactamase hydrolase
93	 24.46	0	114152..114658	-	168	50364908	-	Mfl093	-	unknown transmembrane protein
94	 29.89	0	114737..116071	+	444	50364909	-	Mfl094	-	oligopeptide ABC transporter permease component
95	 29.94	0	116087..117058	+	323	50364910	-	Mfl095	-	oligopeptide ABC transporter permease component
96	 29.64	0	117070..118638	+	522	50364911	-	Mfl096	-	oligopeptide ABC transporter ATP-binding component
97	 26.91	0	118640..120493	+	617	50364912	-	Mfl097	-	oligopeptide ABC transporter ATP-binding component
98	 29.88	0	120496..123477	+	993	50364913	-	Mfl098	-	oligopeptide ABC transporter periplasmic binding component
99	 23.55	0	123545..124474	+	309	50364914	-	Mfl099	-	lysophospholipase
100	 29.18	0	124565..127426	+	953	50364915	-	Mfl100	-	DNA translocase (stage III sporulation protein E)
26.81	MEAN

3.79	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.