IslandPath Analysis: Enterobacter sakazakii ATCC BAA-894



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 56.42   STD DEV: 6.28
Enterobacter sakazakii ATCC BAA-894, complete genome - 1..4368373
4255 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 54.81	0	340..651	+	103	156932230	-	ESA_00001	-	hypothetical protein
2	 52.22	0	684..1313	+	209	156932231	-	ESA_00002	-	50S ribosomal protein L3
3	 50.89	0	693..1085	-	130	156932232	-	ESA_00003	-	hypothetical protein
4	 53.63	0	1324..1929	+	201	156932233	-	ESA_00004	-	50S ribosomal protein L4
5	 54.09	0	1330..1965	-	211	156932235	-	ESA_00006	-	hypothetical protein
6	 48.18	-1	1926..2228	+	100	156932234	-	ESA_00005	-	50S ribosomal protein L23
7	 54.43	0	2300..3067	+	255	156932236	-	ESA_00007	-	50S ribosomal protein L2
8	 49.10	-1	3084..3362	+	92	156932237	-	ESA_00008	-	30S ribosomal protein S19
9	 50.45	0	3376..3708	+	110	156932239	-	ESA_00010	-	50S ribosomal protein L22
10	 51.42	0	3726..4427	+	233	156932240	-	ESA_00011	-	30S ribosomal protein S3
11	 48.81	-1	4682..4849	+	55	156932241	-	ESA_00012	-	hypothetical protein
12	 53.12	0	4849..5040	+	63	156932242	-	ESA_00013	-	50S ribosomal protein L29
13	 48.24	-1	5040..5294	+	84	156932243	-	ESA_00014	-	30S ribosomal protein S17
14	 51.08	0	5460..5831	+	123	156932244	-	ESA_00015	-	50S ribosomal protein L14
15	 45.40	-1	5842..6156	+	104	156932245	-	ESA_00016	-	50S ribosomal protein L24
16	 50.00	-1	6171..6710	+	179	156932247	-	ESA_00018	-	50S ribosomal protein L5
17	 53.27	0	6725..7030	+	101	156932248	-	ESA_00019	-	30S ribosomal protein S14
18	 50.38	0	7064..7456	+	130	156932249	-	ESA_00020	-	30S ribosomal protein S8
19	 51.50	0	7469..8002	+	177	156932250	-	ESA_00021	-	50S ribosomal protein L6
20	 52.82	0	8012..8365	+	117	156932252	-	ESA_00023	-	50S ribosomal protein L18
21	 53.09	0	8380..8880	+	166	156932253	-	ESA_00024	-	30S ribosomal protein S5
22	 51.67	0	8887..9066	+	59	156932254	-	ESA_00025	-	50S ribosomal protein L30
23	 49.55	-1	9283..9504	+	73	156932255	-	ESA_00026	-	hypothetical protein
24	 49.10	-1	9512..10843	+	443	156932256	-	ESA_00027	-	preprotein translocase subunit SecY
25	 47.86	-1	10874..10990	+	38	156932257	-	ESA_00028	-	50S ribosomal protein L36
26	 50.70	0	11137..11493	+	118	156932258	-	ESA_00029	-	30S ribosomal protein S13
27	 52.66	0	11931..12551	+	206	156932259	-	ESA_00030	-	30S ribosomal protein S4
28	 52.63	0	12577..13566	+	329	156932260	-	ESA_00031	-	DNA-directed RNA polymerase subunit alpha
29	 55.45	0	13664..13993	+	109	156932261	-	ESA_00032	-	hypothetical protein
30	 50.68	0	14042..14479	+	145	156932262	-	ESA_00033	-	hypothetical protein
31	 53.05	0	14479..14904	+	141	156932263	-	ESA_00034	-	zinc-responsive transcriptional regulator
32	 45.34	-1	15172..15579	-	135	156932264	-	ESA_00035	-	large-conductance mechanosensitive channel
33	 53.81	0	15734..17110	-	458	156932265	-	ESA_00036	-	potassium transporter peripheral membrane component
34	 55.50	0	17150..18439	-	429	156932266	-	ESA_00037	-	16S rRNA methyltransferase B
35	 58.86	0	18508..19455	-	315	156932267	-	ESA_00038	-	hypothetical protein
36	 50.19	0	19474..19989	-	171	156932268	-	ESA_00039	-	peptide deformylase
37	 59.03	0	20119..21231	+	370	156932269	-	ESA_00040	-	hypothetical protein
38	 49.46	-1	21218..21676	+	152	156932270	-	ESA_00041	-	hypothetical protein
39	 53.23	0	21700..22257	+	185	156932271	-	ESA_00042	-	hypothetical protein
40	 55.32	0	22247..22819	+	190	156932272	-	ESA_00043	-	putative ribosome maturation factor
41	 56.04	0	22823..23641	+	272	156932273	-	ESA_00044	-	shikimate 5-dehydrogenase
42	 58.91	0	23638..23895	+	85	156932274	-	ESA_00045	-	hypothetical protein
43	 53.01	0	23871..24368	-	165	156932275	-	ESA_00046	-	hypothetical protein
44	 53.44	0	30419..31348	+	309	156932277	-	ESA_00052	-	homoserine O-succinyltransferase
45	 56.54	0	31621..33219	+	532	156932278	-	ESA_00053	-	malate synthase
46	 60.24	0	33259..34566	+	435	156932279	-	ESA_00054	-	hypothetical protein
47	 60.02	0	34828..36618	+	596	156932280	-	ESA_00055	-	bifunctional isocitrate dehydrogenase kinase/phosphatase protein
48	 61.55	0	36662..37501	-	279	156932281	-	ESA_00056	-	transcriptional repressor IclR
49	 50.56	0	37523..37702	+	59	156932282	-	ESA_00057	-	hypothetical protein
50	 59.02	0	37747..41382	+	1211	156932283	-	ESA_00058	-	B12-dependent methionine synthase
51	 61.83	0	41874..43505	+	543	156932284	-	ESA_00059	-	hypothetical protein
52	 58.24	0	43656..43928	-	90	156932285	-	ESA_00060	-	hypothetical protein
53	 59.15	0	44019..45095	-	358	156932286	-	ESA_00061	-	hypothetical protein
54	 62.52	0	45117..46709	-	530	156932287	-	ESA_00062	-	hypothetical protein
55	 51.76	0	46816..47070	-	84	156932288	-	ESA_00063	-	hypothetical protein
56	 58.55	0	47185..48318	+	377	156932289	-	ESA_00064	-	hypothetical protein
57	 58.92	0	48321..49547	+	408	156932290	-	ESA_00065	-	hypothetical protein
58	 62.99	+1	49561..50349	+	262	156932291	-	ESA_00066	-	hypothetical protein
59	 62.45	0	50373..51725	-	450	156932292	-	ESA_00067	-	aspartate kinase III
60	 44.07	-1	52288..52464	+	58	156932293	-	ESA_00068	-	hypothetical protein
61	 55.70	0	52461..54110	+	549	156932294	-	ESA_00069	-	glucose-6-phosphate isomerase
62	 46.51	-1	54126..54254	-	42	156932296	-	ESA_00071	-	hypothetical protein
63	 43.70	-2	54181..54315	+	44	156932295	-	ESA_00070	-	hypothetical protein
64	 64.26	+1	54492..54740	+	82	156932297	-	ESA_00072	-	hypothetical protein
65	 56.70	0	54833..55444	+	203	156932299	-	ESA_00074	-	hypothetical protein
66	 60.54	0	55444..56178	+	244	156932300	-	ESA_00075	-	hypothetical protein
67	 59.04	0	56178..58274	+	698	156932301	-	ESA_00076	-	hypothetical protein
68	 59.19	0	58524..58991	-	155	156932302	-	ESA_00077	-	hypothetical protein
69	 66.36	+1	58991..59632	-	213	156932303	-	ESA_00078	-	hypothetical protein
70	 61.28	0	59840..60730	-	296	156932304	-	ESA_00079	-	maltose transporter permease
71	 56.96	0	60742..62286	-	514	156932305	-	ESA_00080	-	maltose transporter membrane protein
72	 55.73	0	62552..63877	-	441	156932306	-	ESA_00081	-	maltose ABC transporter periplasmic protein
73	 58.83	0	64112..65221	+	369	156932307	-	ESA_00082	-	maltose/maltodextrin transporter ATP-binding protein
74	 54.51	0	65247..66611	+	454	156932308	-	ESA_00083	-	maltoporin
75	 59.77	0	66735..67676	+	313	156932309	-	ESA_00084	-	maltose regulon periplasmic protein
76	 59.61	0	67859..68368	+	169	156932310	-	ESA_00085	-	chorismate pyruvate lyase
77	 59.34	0	68368..69240	+	290	156932311	-	ESA_00086	-	4-hydroxybenzoate octaprenyltransferase
78	 59.16	0	69522..71825	-	767	156932312	-	ESA_00087	-	glycerol-3-phosphate acyltransferase
79	 56.64	0	72081..72449	+	122	156932313	-	ESA_00088	-	hypothetical protein
80	 54.68	0	72558..73166	+	202	156932314	-	ESA_00089	-	LexA repressor
81	 63.23	+1	73292..74599	+	435	156932315	-	ESA_00090	-	DNA-damage-inducible SOS response protein
82	 46.67	-1	74807..75016	+	69	156932316	-	ESA_00091	-	putative stress-response protein
83	 54.98	0	75096..75617	-	173	156932317	-	ESA_00092	-	zinc uptake transcriptional repressor
84	 57.79	0	75721..76227	+	168	156932318	-	ESA_00093	-	hypothetical protein
85	 58.54	0	76427..77656	+	409	156932319	-	ESA_00094	-	hypothetical protein
86	 59.98	0	77801..78742	+	313	156932320	-	ESA_00095	-	tRNA-dihydrouridine synthase A
87	 51.36	0	78803..79096	-	97	156932322	-	ESA_00097	-	hypothetical protein
88	 57.09	0	78873..79133	+	86	156932321	-	ESA_00096	-	phage shock protein G
89	 60.67	0	79314..80297	-	327	156932323	-	ESA_00098	-	quinone oxidoreductase, NADPH-dependent
90	 56.93	0	80418..81824	+	468	156932324	-	ESA_00099	-	replicative DNA helicase
91	 62.41	0	81985..83064	+	359	156932325	-	ESA_00100	-	alanine racemase
92	 59.38	0	83473..84666	+	397	156932326	-	ESA_00101	-	aromatic amino acid aminotransferase
93	 51.52	0	85087..86769	+	560	156932327	-	ESA_00102	-	hypothetical protein
94	 52.72	0	86880..87302	+	140	156932328	-	ESA_00103	-	hypothetical protein
95	 53.39	0	87299..87652	+	117	156932329	-	ESA_00104	-	hypothetical protein
96	 54.49	0	87694..88038	-	114	156932330	-	ESA_00105	-	hypothetical protein
97	 58.38	0	88051..88593	-	180	156932331	-	ESA_00106	-	hypothetical protein
98	 58.70	0	88651..91476	-	941	156932332	-	ESA_00107	-	excinuclease ABC subunit A
99	 63.08	+1	91686..92243	+	185	156932333	-	ESA_00108	-	hypothetical protein
100	 53.68	0	92591..93637	+	348	156932334	-	ESA_00109	-	hypothetical protein
56.42	MEAN

6.28	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.