version 1.0
Magnetococcus sp. MC-1, complete genome - 1..4719581 3716 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 54.76 0 181..1524 + 447 117923319 - Mmc1_0001 - chromosomal replication initiator protein DnaA 2 57.56 0 1570..2700 + 376 117923320 - Mmc1_0002 - DNA polymerase III, beta subunit 3 61.71 +1 2711..3859 + 382 117923321 - Mmc1_0003 - DNA replication and repair protein RecF 4 52.31 0 3859..5223 + 454 117923322 - Mmc1_0004 - ATP binding protein 5 49.42 -1 5220..5909 + 229 117923323 - Mmc1_0005 - hypothetical protein 6 55.23 0 5916..8354 + 812 117923324 - Mmc1_0006 - DNA gyrase subunit B 7 48.08 -1 8555..9178 - 207 117923325 - Mmc1_0007 - hypothetical protein 8 57.10 0 9638..10243 - 201 117923326 - Mmc1_0008 - hypothetical protein 9 51.85 0 10453..10722 + 89 117923327 - Mmc1_0009 - flagellar biosynthetic protein FliQ 10 53.31 0 10733..11533 + 266 117923328 - Mmc1_0010 - flagellar biosynthetic protein FliR 11 49.63 -1 11564..12631 + 355 117923329 - Mmc1_0011 - flagellar biosynthetic protein FlhB 12 56.51 0 12800..13252 + 150 117923330 - Mmc1_0012 - regulatory protein RecX 13 57.45 0 13357..15993 + 878 117923331 - Mmc1_0013 - alanyl-tRNA synthetase 14 59.90 +1 16227..17009 - 260 117923332 - Mmc1_0014 - phosphomethylpyrimidine kinase 15 53.90 0 17290..18675 - 461 117923333 hslU Mmc1_0015 - ATP-dependent protease ATP-binding subunit 16 52.46 0 18810..20273 + 487 117923334 - Mmc1_0016 - hypothetical protein 17 53.63 0 20282..20818 - 178 117923335 - Mmc1_0017 - ATP-dependent protease peptidase subunit 18 48.72 -1 20962..21195 + 77 117923336 - Mmc1_0018 - hypothetical protein 19 54.57 0 21209..21952 + 247 117923337 - Mmc1_0019 - arginyl-tRNA-protein transferase 20 51.89 0 22046..22708 - 220 117923338 - Mmc1_0020 - dephospho-CoA kinase 21 49.75 -1 22710..23507 - 265 117923339 - Mmc1_0021 - type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A 22 51.80 0 23815..24675 - 286 117923340 - Mmc1_0022 - shikimate dehydrogenase 23 52.44 0 24687..25445 - 252 117923341 - Mmc1_0023 - hypothetical protein 24 48.15 -1 25568..26701 + 377 117923342 - Mmc1_0024 - hypothetical protein 25 52.29 0 27100..28170 + 356 117923343 - Mmc1_0025 - uroporphyrinogen decarboxylase 26 50.11 -1 28170..29576 + 468 117923344 - Mmc1_0026 - coproporphyrinogen III oxidase, anaerobic 27 54.96 0 29839..31230 + 463 117923345 - Mmc1_0027 - protoporphyrinogen oxidase 28 53.22 0 31230..31943 + 237 117923346 - Mmc1_0028 - DNA polymerase III, epsilon subunit 29 53.44 0 32014..32565 + 183 117923347 - Mmc1_0029 - cytochrome c553 30 53.40 0 32681..33313 + 210 117923348 - Mmc1_0030 - hypothetical protein 31 60.52 +1 33413..34600 + 395 117923349 - Mmc1_0031 - 8-amino-7-oxononanoate synthase 32 60.94 +1 34673..35371 + 232 117923350 - Mmc1_0032 - biotin synthesis protein BioH 33 58.43 0 35368..36180 + 270 117923351 - Mmc1_0033 - biotin biosynthesis protein BioC 34 55.90 0 36233..37198 + 321 117923352 - Mmc1_0034 - biotin synthase 35 55.81 0 37226..37870 + 214 117923353 - Mmc1_0035 - hypothetical protein 36 60.87 +1 37867..38487 + 206 117923354 - Mmc1_0036 - dethiobiotin synthase 37 58.52 +1 38622..39935 + 437 117923355 - Mmc1_0037 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 38 61.71 +1 39950..41704 - 584 117923356 - Mmc1_0038 - tetratricopeptide TPR_4 39 60.11 +1 41900..42769 - 289 117923357 - Mmc1_0039 - pantothenate synthetase 40 60.59 +1 42778..43584 - 268 117923358 - Mmc1_0040 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 41 59.46 +1 43642..44085 - 147 117923359 - Mmc1_0041 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 42 52.74 0 44151..45026 - 291 117923360 - Mmc1_0042 - peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins 43 54.22 0 45368..46315 + 315 117923361 - Mmc1_0043 - peptidase M14, carboxypeptidase A 44 58.87 +1 46312..47529 + 405 117923362 - Mmc1_0044 - hypothetical protein 45 55.52 0 47652..48503 + 283 117923363 - Mmc1_0045 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 46 59.88 +1 48503..49666 + 387 117923364 - Mmc1_0046 - succinyl-diaminopimelate desuccinylase 47 56.73 0 49806..50117 - 103 117923365 - Mmc1_0047 - ferredoxin, 2Fe-2S 48 51.19 0 50570..50905 + 111 117923366 - Mmc1_0048 - DsrC family protein 49 52.28 0 51232..51933 + 233 117923367 - Mmc1_0049 - nitrate reductase, gamma subunit 50 53.03 0 52041..53543 + 500 117923368 - Mmc1_0050 - Fe-S oxidoreductase 51 59.56 +1 53544..54275 + 243 117923369 - Mmc1_0051 - ribonuclease PH 52 59.16 +1 54428..55600 + 390 117923370 - Mmc1_0052 - coproporphyrinogen III oxidase, anaerobic 53 53.92 0 55693..57591 + 632 117923371 - Mmc1_0053 - transposase, IS4 family protein 54 61.24 +1 57757..59304 + 515 117923372 - Mmc1_0054 - methyl-accepting chemotaxis sensory transducer 55 59.09 +1 59521..60642 + 373 117923373 - Mmc1_0055 - L-alanine dehydrogenase 56 56.28 0 60705..62090 - 461 117923374 - Mmc1_0056 - peptidase M48, Ste24p 57 54.61 0 62251..62706 + 151 117923375 - Mmc1_0057 - flagellar export protein FliJ 58 52.83 0 62706..63218 + 170 117923376 - Mmc1_0058 - hypothetical protein 59 53.85 0 63688..64506 + 272 117923377 - Mmc1_0059 - flagellin domain-containing protein 60 59.54 +1 64649..65251 + 200 117923378 - Mmc1_0060 - hypothetical protein 61 60.11 +1 65238..65969 + 243 117923379 - Mmc1_0061 - hypothetical protein 62 53.70 0 66117..66887 + 256 117923380 - Mmc1_0062 - flagellin domain-containing protein 63 54.65 0 67016..67822 + 268 117923381 - Mmc1_0063 - flagellin domain-containing protein 64 57.97 0 68873..69688 + 271 117923382 - Mmc1_0064 - flagellin domain-containing protein 65 57.60 0 69892..70707 + 271 117923383 - Mmc1_0065 - flagellin domain-containing protein 66 57.97 0 70911..71726 + 271 117923384 - Mmc1_0066 - flagellin domain-containing protein 67 56.77 0 71868..72170 - 100 117923385 - Mmc1_0067 - hypothetical protein 68 57.72 0 72401..73216 + 271 117923386 - Mmc1_0068 - flagellin domain-containing protein 69 57.84 0 73748..74563 + 271 117923387 - Mmc1_0069 - flagellin domain-containing protein 70 56.13 0 75111..75926 + 271 117923388 - Mmc1_0070 - flagellin domain-containing protein 71 57.41 0 76171..77304 + 377 117923389 - Mmc1_0071 - flagellin domain-containing protein 72 55.27 0 77939..78754 + 271 117923390 - Mmc1_0072 - flagellin domain-containing protein 73 55.64 0 79378..80193 + 271 117923391 - Mmc1_0073 - flagellin domain-containing protein 74 57.65 0 80287..80652 + 121 117923392 - Mmc1_0074 - hypothetical protein 75 53.12 0 80649..81017 - 122 117923393 - Mmc1_0075 - hypothetical protein 76 55.92 0 81137..81964 + 275 117923394 - Mmc1_0076 - flagellin domain-containing protein 77 52.48 0 82288..83112 + 274 117923395 - Mmc1_0077 - flagellin domain-containing protein 78 57.93 0 83294..84106 - 270 117923396 - Mmc1_0078 - inositol-phosphate phosphatase 79 52.41 0 84532..86298 + 588 117923397 - Mmc1_0079 - flagellar hook-associated protein FlgK 80 53.98 0 86321..87526 + 401 117923398 - Mmc1_0080 - flagellin-like protein 81 51.33 0 87557..88045 + 162 117923399 - Mmc1_0081 - hypothetical protein 82 55.56 0 88268..89086 + 272 117923400 - Mmc1_0082 - flagellin domain-containing protein 83 51.71 0 89154..89534 + 126 117923401 - Mmc1_0083 - flagellar protein FlaG protein 84 51.88 0 89589..91028 + 479 117923402 - Mmc1_0084 - flagellar hook-associated 2 domain-containing protein 85 53.01 0 91126..91491 + 121 117923403 - Mmc1_0085 - flagellar protein FliS 86 53.83 0 91595..92116 + 173 117923404 - Mmc1_0086 - flagellar protein FliS 87 52.63 0 92165..92506 + 113 117923405 - Mmc1_0087 - hypothetical protein 88 57.99 0 92776..93432 - 218 117923406 - Mmc1_0088 - hypothetical protein 89 47.57 -1 93583..93849 + 88 117923407 - Mmc1_0089 - hypothetical protein 90 54.55 0 93846..94439 + 197 117923408 - Mmc1_0090 - shikimate kinase 91 58.16 0 95149..95442 + 97 117923409 - Mmc1_0091 - hypothetical protein 92 48.45 -1 95540..95830 - 96 117923410 - Mmc1_0092 - integration host factor, alpha subunit 93 55.68 0 96408..97709 + 433 117923411 - Mmc1_0093 - glutamate-1-semialdehyde 2,1-aminomutase 94 57.37 0 97882..99483 - 533 117923412 - Mmc1_0094 - hypothetical protein 95 53.80 0 99703..100650 + 315 117923413 - Mmc1_0095 - beta-lactamase domain-containing protein 96 58.16 0 100922..101356 - 144 117923414 - Mmc1_0096 - hypothetical protein 97 58.67 +1 101607..102569 + 320 117923415 - Mmc1_0097 - sigma-54 dependent trancsriptional regulator 98 59.74 +1 102678..103601 - 307 117923416 - Mmc1_0098 - dihydroorotate oxidase B, electron transfer subunit 99 53.78 0 103804..104160 - 118 117923417 - Mmc1_0099 - hypothetical protein 100 56.01 0 104173..104538 - 121 117923418 - Mmc1_0100 - nitrogen regulatory protein P-II 54.32 MEAN 4.16 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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