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Granulibacter bethesdensis CGDNIH1, complete genome - 1..2708355 2437 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 58.86 0 13..1575 + 520 114326665 - GbCGDNIH1_0001 - multidrug resistance protein B 2 57.46 0 1592..2623 - 343 114326666 - GbCGDNIH1_0002 - uroporphyrinogen decarboxylase 3 58.28 0 2957..3850 + 297 114326667 - GbCGDNIH1_0003 - ATP/GTP-binding protein 4 58.59 0 3895..4488 + 197 114326668 - GbCGDNIH1_0004 - septum formation protein Maf 5 58.64 0 4555..7182 + 875 114326669 leuS GbCGDNIH1_0005 - leucyl-tRNA synthetase 6 52.23 -1 7279..7860 + 193 114326670 - GbCGDNIH1_0006 - hypothetical protein 7 58.14 0 7873..8928 + 351 114326671 holA GbCGDNIH1_0007 - DNA polymerase III subunit delta 8 58.48 0 8909..9775 - 288 114326672 - GbCGDNIH1_0008 - chromosome partitioning protein parB 9 55.63 0 9772..10686 - 304 114326673 - GbCGDNIH1_0009 - chromosome partitioning protein parA 10 55.30 0 10679..11320 - 213 114326674 - GbCGDNIH1_0010 - methyltransferase gidB 11 57.67 0 11308..13197 - 629 114326675 - GbCGDNIH1_0011 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 12 57.29 0 13238..14560 - 440 114326676 - GbCGDNIH1_0012 - tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase 13 52.21 -1 14557..14964 - 135 114326677 - GbCGDNIH1_0013 - ferredoxin, 2Fe-2s 14 58.19 0 15151..17190 + 679 114326678 - GbCGDNIH1_0014 - thymidylate kinase 15 52.46 -1 17247..17795 + 182 114326679 - GbCGDNIH1_0015 - O6-methylguanine-DNA methyltransferase 16 57.45 0 17808..18794 + 328 114326680 - GbCGDNIH1_0016 - quinone oxidoreductase 17 55.95 0 18873..19124 + 83 114326681 - GbCGDNIH1_0017 - cold shock protein 18 58.82 0 19367..19672 + 101 114326682 - GbCGDNIH1_0018 - DNA-binding protein HU 19 57.30 0 19815..21149 - 444 114326683 - GbCGDNIH1_0019 - manganese transport protein mntH 20 56.91 0 21363..22151 + 262 114326684 - GbCGDNIH1_0020 - general L-amino acid transport ATP-binding protein aapP 21 59.15 0 22347..23477 - 376 114326685 - GbCGDNIH1_0021 - chaperone protein dnaJ 22 61.30 0 23647..25545 - 632 114326686 - GbCGDNIH1_0022 - chaperone protein dnaK 23 61.97 0 25735..26415 - 226 114326687 - GbCGDNIH1_0023 - grpE protein 24 63.86 0 26463..27602 - 379 114326688 hrcA GbCGDNIH1_0024 - heat-inducible transcription repressor 25 61.49 0 27828..28580 + 250 114326689 - GbCGDNIH1_0025 - ribonuclease PH 26 62.94 0 28619..29236 + 205 114326690 - GbCGDNIH1_0026 - xanthosine triphosphate pyrophosphatase 27 62.00 0 29281..29880 + 199 114326691 - GbCGDNIH1_0027 - nitroreductase family protein 28 61.27 0 29877..31061 + 394 114326692 - GbCGDNIH1_0028 - coproporphyrinogen III oxidase 29 60.96 0 31074..31529 - 151 114326693 - GbCGDNIH1_0029 - 3-oxoacyl-[acyl-carrier protein] reductase 30 62.60 0 31526..32362 - 278 114326694 - GbCGDNIH1_0030 - hypothetical protein 31 62.88 0 32365..33552 - 395 114326695 - GbCGDNIH1_0031 - 3-oxoacyl-(acyl carrier protein) synthase I 32 61.81 0 33545..36037 - 830 114326696 - GbCGDNIH1_0032 - transporter 33 54.99 0 36071..37414 - 447 114326697 - GbCGDNIH1_0033 - c4-dicarboxylate transport protein 34 53.58 -1 37548..38036 - 162 114326698 - GbCGDNIH1_0034 - hypothetical protein 35 58.40 0 38050..39138 - 362 114326699 - GbCGDNIH1_0035 - oligosaccharide acyltransferase family protein 36 57.14 0 39195..39572 - 125 114326700 - GbCGDNIH1_0036 - AMP-(fatty)acid ligases 37 60.41 0 39562..41016 - 484 114326701 - GbCGDNIH1_0037 - AMP-(fatty)acid ligases 38 59.46 0 41177..42064 + 295 114326702 - GbCGDNIH1_0038 - chitooligosaccharide deacetylase 39 62.36 0 42216..43166 + 316 114326703 - GbCGDNIH1_0039 - tolQ protein 40 57.47 0 43200..43634 + 144 114326704 - GbCGDNIH1_0040 - tolR protein 41 63.97 0 43634..44524 + 296 114326705 - GbCGDNIH1_0041 - tonB protein 42 58.92 0 44575..45387 + 270 114326706 - GbCGDNIH1_0042 - hypothetical protein 43 63.00 0 45384..45983 + 199 114326707 - GbCGDNIH1_0043 - hypothetical protein 44 59.77 0 46087..47739 - 550 114326708 - GbCGDNIH1_0044 - copper resistance protein D 45 59.65 0 47758..48270 - 170 114326709 - GbCGDNIH1_0045 - copper resistance protein C 46 59.19 0 48257..49312 - 351 114326710 - GbCGDNIH1_0046 - hypothetical protein 47 59.98 0 49507..51225 + 572 114326711 - GbCGDNIH1_0047 - formate--tetrahydrofolate ligase 48 61.86 0 51317..52501 + 394 114326712 - GbCGDNIH1_0048 - serine--glyoxylate aminotransferase 49 58.47 0 52627..53565 + 312 114326713 - GbCGDNIH1_0049 - glycerate dehydrogenase 50 61.05 0 53614..54486 + 290 114326714 - GbCGDNIH1_0050 - methylenetetrahydrofolate dehydrogenase (NADP+) 51 60.78 0 54483..55127 + 214 114326715 - GbCGDNIH1_0051 - methenyltetrahydrofolate cyclohydrolase 52 61.28 0 55236..56405 + 389 114326716 sucC GbCGDNIH1_0052 - succinyl-CoA synthetase subunit beta 53 62.43 0 56421..57317 + 298 114326717 - GbCGDNIH1_0053 - succinyl-CoA synthetase subunit alpha 54 61.52 0 57324..60104 + 926 114326718 - GbCGDNIH1_0054 - phosphoenolpyruvate carboxylase 55 59.44 0 60117..61112 + 331 114326719 - GbCGDNIH1_0055 - malyl-CoA lyase 56 55.75 0 61191..61868 - 225 114326720 - GbCGDNIH1_0056 - carbonic anhydrase 57 60.24 0 61924..62685 + 253 114326721 fabG GbCGDNIH1_0057 - 3-ketoacyl-(acyl-carrier-protein) reductase 58 60.45 0 62666..63904 - 412 114326722 - GbCGDNIH1_0058 - Bcr family multidrug resistance transporter 59 56.85 0 64118..65461 + 447 114326723 rho GbCGDNIH1_0059 - transcription termination factor Rho 60 43.55 -2 65466..67403 + 645 114326724 - GbCGDNIH1_0060 - putative cytoplasmic protein 61 49.04 -2 67415..69037 + 540 114326725 - GbCGDNIH1_0061 - hypothetical protein 62 47.19 -2 69218..70054 + 278 114326726 - GbCGDNIH1_0062 - putative cytoplasmic protein 63 59.30 0 70130..70645 + 171 114326727 - GbCGDNIH1_0063 - ribonuclease activity regulator protein RraA 64 57.14 0 70736..72058 + 440 114326728 - GbCGDNIH1_0064 - S-adenosyl-L-homocysteine hydrolase 65 58.60 0 72413..72784 + 123 114326729 - GbCGDNIH1_0065 - hypothetical protein 66 52.68 -1 72930..73787 - 285 114326730 - GbCGDNIH1_0066 - 4'-phosphopantetheinyl transferase 67 58.22 0 73789..74214 + 141 114326731 - GbCGDNIH1_0067 - organic hydroperoxide resistance protein 68 57.02 0 74221..74946 + 241 114326732 - GbCGDNIH1_0068 - GMP synthase (glutamine-hydrolyzing) 69 62.15 0 74924..75499 - 191 114326733 - GbCGDNIH1_0069 - alpha-ribazole-5'-phosphate phosphatase 70 61.92 0 75507..76328 - 273 114326734 - GbCGDNIH1_0070 - electron transfer flavoprotein beta-subunit 71 67.53 +1 76325..77599 - 424 114326735 - GbCGDNIH1_0071 - electron transfer flavoprotein alpha-subunit 72 62.75 0 77596..79560 - 654 114326736 - GbCGDNIH1_0072 - fumarate reductase iron-sulfur protein 73 61.58 0 79585..81630 - 681 114326737 - GbCGDNIH1_0073 - NADH-dependent flavin oxidoreductase 74 65.03 +1 81685..82659 - 324 114326738 - GbCGDNIH1_0074 - AraC family transcriptional regulator 75 60.51 0 82656..83744 - 362 114326739 - GbCGDNIH1_0075 - ring hydroxylating dioxygenase oxidoreductase subunit 76 57.75 0 83741..85018 - 425 114326740 - GbCGDNIH1_0076 - ring hydroxylating dioxygenase, alpha-subunit 77 63.35 0 85215..86240 - 341 114326741 - GbCGDNIH1_0077 - AraC family transcriptional regulator 78 61.76 0 86260..87624 - 454 114326742 - GbCGDNIH1_0078 - L-serine dehydratase 79 65.03 +1 87643..88191 - 182 114326743 - GbCGDNIH1_0079 - sarcosine oxidase gamma subunit 80 63.52 0 88184..91171 - 995 114326744 - GbCGDNIH1_0080 - sarcosine oxidase alpha subunit 81 60.37 0 91168..91437 - 89 114326745 - GbCGDNIH1_0081 - sarcosine oxidase delta subunit 82 60.69 0 91471..92724 - 417 114326746 - GbCGDNIH1_0082 - sarcosine oxidase beta subunit 83 46.97 -2 92895..93092 - 65 114326747 - GbCGDNIH1_0083 - hypothetical protein 84 54.47 -1 93189..94205 + 338 114326748 - GbCGDNIH1_0084 - glycine betaine/L-proline transport system binding protein proX 85 59.62 0 94225..95076 + 283 114326749 - GbCGDNIH1_0085 - glycine betaine/L-proline transport system permease protein proW 86 58.23 0 95073..96341 + 422 114326750 - GbCGDNIH1_0086 - glycine betaine/L-proline transport ATP-binding protein proV 87 60.09 0 96436..97089 - 217 114326751 folE GbCGDNIH1_0087 - GTP cyclohydrolase I 88 56.67 0 97225..97734 - 169 114326752 apaG GbCGDNIH1_0088 - ApaG 89 62.58 0 97765..99012 - 415 114326753 - GbCGDNIH1_0089 - O-succinylhomoserine sulfhydrylase 90 53.91 -1 99477..100166 - 229 114326754 - GbCGDNIH1_0090 - ThiJ/PfpI family protein 91 45.74 -2 100365..100880 - 171 114326755 - GbCGDNIH1_0091 - hypothetical protein 92 49.83 -1 101279..101581 + 100 114326756 - GbCGDNIH1_0092 - hypothetical protein 93 45.83 -2 101901..102548 + 215 114326757 - GbCGDNIH1_0093 - protein yciF 94 53.80 -1 103129..104037 - 302 114326758 - GbCGDNIH1_0094 - short chain dehydrogenase 95 61.08 0 104341..104913 - 190 114326759 - GbCGDNIH1_0095 - cobalamin adenosyltransferase family protein 96 61.11 0 104942..105589 - 215 114326760 - GbCGDNIH1_0096 - tonB protein 97 60.91 0 105780..106700 - 306 114326761 - GbCGDNIH1_0097 - cobalt-zinc-cadmium resistance protein czcD 98 62.69 0 106818..107849 - 343 114326762 - GbCGDNIH1_0098 - alcohol dehydrogenase 99 59.78 0 107871..108407 + 178 114326763 - GbCGDNIH1_0099 - hypothetical protein 100 63.70 0 108404..109078 + 224 114326764 - GbCGDNIH1_0100 - ribosomal large subunit pseudouridine synthase A 59.37 MEAN 4.89 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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