version 1.0
Escherichia coli HS, complete genome - 1..4643538 4378 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 51.52 0 190..255 + 21 157159468 thrL EcHS_A0002 - thr operon leader peptide 2 53.15 0 336..2798 + 820 157159469 thrA EcHS_A0003 - bifunctional aspartokinase I/homeserine dehydrogenase I 3 55.84 0 2800..3732 + 310 157159470 thrB EcHS_A0004 - homoserine kinase 4 53.07 0 3733..5019 + 428 157159471 thrC EcHS_A0005 - threonine synthase 5 52.80 0 5309..5719 - 136 157159472 - EcHS_A0006 - hypothetical protein 6 49.29 0 5682..6458 - 258 157159473 - EcHS_A0007 - hypothetical protein 7 53.04 0 6528..7958 - 476 157159474 agcS EcHS_A0008 - amino acid carrier protein 8 51.26 0 8237..9190 + 317 157159475 tal2 EcHS_A0009 - transaldolase B 9 53.91 0 9305..9892 + 195 157159476 mog EcHS_A0010 - molybdenum cofactor biosynthesis protein 10 53.09 0 9927..10493 - 188 157159477 - EcHS_A0011 - hypothetical protein 11 51.12 0 10642..11355 - 237 157159478 - EcHS_A0012 - hypothetical protein 12 47.90 0 11381..11785 - 134 157159479 - EcHS_A0013 - hypothetical protein 13 42.00 -1 11920..12069 - 49 157159480 - EcHS_A0014 - hypothetical protein 14 51.28 0 12162..14078 + 638 157159481 dnaK EcHS_A0015 - molecular chaperone DnaK 15 55.00 0 14167..15297 + 376 157159482 dnaJ EcHS_A0016 - chaperone protein DnaJ 16 51.93 0 15560..16672 - 370 157159483 - EcHS_A0017 - IS186, transposase 17 51.43 0 16750..16959 - 69 157159484 - EcHS_A0018 - putative Hok/gef family protein 18 51.41 0 17488..18654 + 388 157159485 nhaA EcHS_A0019 - pH-dependent sodium/proton antiporter 19 47.56 0 18720..19619 + 299 157159486 nhaR EcHS_A0020 - transcriptional activator NhaR 20 36.41 -2 19658..20437 - 259 157159487 - EcHS_A0021 - hypothetical protein 21 31.74 -2 22207..22770 - 187 157159488 - EcHS_A4640 - hypothetical protein 22 30.02 -2 22812..23627 - 271 157159489 - EcHS_A0024 - hypothetical protein 23 46.59 0 24111..24374 - 87 157159490 rpsT EcHS_A0025 - 30S ribosomal protein S20 24 48.86 0 24477..24695 + 72 157159491 - EcHS_A0026 - hypothetical protein 25 53.40 0 24703..25644 + 313 157159492 ribF EcHS_A0027 - bifunctional riboflavin kinase/FMN adenylyltransferase 26 55.56 0 25687..28503 + 938 157159493 ileS EcHS_A0028 - isoleucyl-tRNA synthetase 27 52.93 0 28503..28997 + 164 157159494 lspA EcHS_A0029 - lipoprotein signal peptidase 28 54.44 0 29085..29534 + 149 157159495 fkpB EcHS_A0030 - FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase 29 54.15 0 29536..30486 + 316 157159496 ispH EcHS_A0031 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 30 56.28 +1 30552..31466 + 304 157159497 rihC EcHS_A0032 - ribonucleoside hydrolase RihC 31 54.26 0 31633..32454 + 273 157159498 dapB EcHS_A0033 - dihydrodipicolinate reductase 32 27.98 -2 32496..32663 - 55 157159499 - EcHS_A0034 - hypothetical protein 33 53.18 0 32910..34058 + 382 157159500 carA EcHS_A0035 - carbamoyl phosphate synthase small subunit 34 56.27 +1 34076..37297 + 1073 157159501 carB EcHS_A0036 - carbamoyl phosphate synthase large subunit 35 35.62 -2 37305..37523 - 72 157159502 - EcHS_A0037 - hypothetical protein 36 46.72 0 37558..37953 + 131 157159503 caiF EcHS_A0038 - DNA-binding transcriptional activator CaiF 37 55.16 0 38039..38629 - 196 157159504 caiE EcHS_A0039 - carnitine operon protein CaiE 38 52.91 0 38635..39528 - 297 157159505 caiD EcHS_A0040 - carnitinyl-CoA dehydratase 39 51.05 0 39529..41097 - 522 157159506 - EcHS_A0041 - putative crotonobetaine/carnitine-CoA ligase 40 52.46 0 41156..42373 - 405 157159507 caiB EcHS_A0042 - crotonobetainyl-CoA:carnitine CoA-transferase 41 54.16 0 42502..43644 - 380 157159508 caiA EcHS_A0043 - crotonobetainyl-CoA dehydrogenase 42 51.55 0 43675..45189 - 504 157159509 caiT EcHS_A0044 - L-carnitine/gamma-butyrobetaine antiporter 43 28.43 -2 45204..45305 + 33 157159510 - EcHS_A0045 - hypothetical protein 44 29.73 -2 45484..45594 + 36 157159511 - EcHS_A0046 - hypothetical protein 45 52.40 0 45663..46433 + 256 157159512 fixA EcHS_A0047 - putative electron transfer flavoprotein FixA 46 56.16 +1 46448..47389 + 313 157159513 fixB EcHS_A0048 - putative electron transfer flavoprotein FixB 47 55.01 0 47440..48726 + 428 157159514 fixC EcHS_A0049 - putative oxidoreductase FixC 48 57.29 +1 48723..49010 + 95 157159515 fixX EcHS_A0050 - ferredoxin homolog FixX 49 53.45 0 49069..50400 + 443 157159516 - EcHS_A0051 - major facilitator family transporter 50 54.99 0 50508..51038 + 176 157159517 kefF EcHS_A0052 - glutathione-regulated potassium-efflux system ancillary protein KefF 51 55.45 0 51031..52893 + 620 157159518 kefC EcHS_A0053 - glutathione-regulated potassium-efflux system protein KefC 52 53.54 0 53085..53564 + 159 157159519 folA EcHS_A0054 - dihydrofolate reductase 53 55.40 0 53642..54484 - 280 157159520 apaH EcHS_A0055 - diadenosine tetraphosphatase 54 51.85 0 54491..54868 - 125 157159521 apaG EcHS_A0056 - ApaG 55 53.28 0 54871..55692 - 273 157159522 ksgA EcHS_A0057 - dimethyladenosine transferase 56 56.16 +1 55689..56678 - 329 157159523 pdxA EcHS_A0058 - 4-hydroxythreonine-4-phosphate dehydrogenase 57 53.61 0 56678..57964 - 428 157159524 surA EcHS_A0059 - peptidyl-prolyl cis-trans isomerase SurA 58 51.38 0 58017..60371 - 784 157159525 imp EcHS_A0060 - organic solvent tolerance protein 59 52.70 0 60626..61441 + 271 157159526 djlA EcHS_A0061 - Dna-J like membrane chaperone protein 60 54.24 0 61558..62217 - 219 157159527 - EcHS_A0062 - 23S rRNA/tRNA pseudouridine synthase A 61 54.83 0 62229..65135 - 968 157159528 rapA EcHS_A0063 - ATP-dependent helicase HepA 62 55.10 0 65300..67651 - 783 157159529 polB EcHS_A0064 - DNA polymerase II 63 55.32 0 67726..68421 - 231 157159530 araD EcHS_A0065 - L-ribulose-5-phosphate 4-epimerase 64 55.09 0 68590..70092 - 500 157159531 araA EcHS_A0066 - L-arabinose isomerase 65 58.32 +1 70103..71803 - 566 157159532 araB EcHS_A0067 - ribulokinase 66 52.79 0 72142..73020 + 292 157159533 araC EcHS_A0068 - DNA-binding transcriptional regulator AraC 67 54.64 0 73106..73870 + 254 157159534 - EcHS_A0069 - hypothetical protein 68 56.65 +1 73984..74682 - 232 157159535 thiQ EcHS_A0070 - thiamine transporter ATP-binding subunit 69 58.41 +1 74666..76276 - 536 157159536 thiP EcHS_A0071 - thiamine transporter membrane protein 70 53.66 0 76252..77235 - 327 157159537 thiB EcHS_A0072 - thiamine transporter substrate binding subunit 71 52.50 0 77279..77398 - 39 157159538 - EcHS_A0073 - putative lipoprotein 72 54.71 0 77399..79054 - 551 157159539 sgrR EcHS_A0074 - transcriptional regulator SgrR 73 48.35 0 79376..80554 + 392 157159540 setA EcHS_A0075 - sugar efflux transporter A 74 51.32 0 80603..81208 - 201 157159541 leuD EcHS_A0076 - isopropylmalate isomerase small subunit 75 55.75 0 81219..82619 - 466 157159542 leuC EcHS_A0077 - isopropylmalate isomerase large subunit 76 55.59 0 82622..83713 - 363 157159543 leuB EcHS_A0078 - 3-isopropylmalate dehydrogenase 77 52.74 0 83713..85284 - 523 157159544 leuA EcHS_A0079 - 2-isopropylmalate synthase 78 47.13 0 85377..85463 - 28 157159545 leuL EcHS_A0080 - leu operon leader peptide 79 45.82 0 86123..87067 + 314 157159546 leuO EcHS_A0081 - leucine transcriptional activator 80 27.64 -2 87103..87225 - 40 157159547 - EcHS_A0082 - hypothetical protein 81 52.87 0 87385..89109 + 574 157159548 ilvI EcHS_A0083 - acetolactate synthase 3 catalytic subunit 82 50.41 0 89112..89603 + 163 157159549 ilvH EcHS_A0084 - acetolactate synthase 3 regulatory subunit 83 39.39 -2 89655..89786 + 43 157159550 - EcHS_A0085 - hypothetical protein 84 54.93 0 89783..90787 + 334 157159551 fruR EcHS_A0086 - DNA-binding transcriptional regulator FruR 85 52.51 0 91389..91847 + 152 157159552 mraZ EcHS_A0087 - cell division protein MraZ 86 55.63 0 91849..92790 + 313 157159553 mraW EcHS_A0088 - S-adenosyl-methyltransferase MraW 87 50.27 0 92787..93152 + 121 157159554 ftsL EcHS_A0089 - cell division protein FtsL 88 54.22 0 93168..94934 + 588 157159555 ftsI EcHS_A0090 - peptidoglycan synthetase FtsI 89 56.52 +1 94921..96408 + 495 157159556 murE EcHS_A0091 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 90 55.26 0 96405..97763 + 452 157159557 murF EcHS_A0092 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 91 53.37 0 97757..98839 + 360 157159558 mraY EcHS_A0093 - phospho-N-acetylmuramoyl-pentapeptide-transferase 92 54.90 0 98842..100158 + 438 157159559 murD EcHS_A0094 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 93 53.01 0 100158..101402 + 414 157159560 ftsW EcHS_A0095 - cell division protein FtsW 94 55.99 0 101399..102466 + 355 157159561 murG EcHS_A0096 - N-acetylglucosaminyl transferase 95 54.40 0 102520..103995 + 491 157159562 murC EcHS_A0097 - UDP-N-acetylmuramate--L-alanine ligase 96 51.79 0 103988..104908 + 306 157159563 ddlB EcHS_A0098 - D-alanine--D-alanine ligase 97 53.55 0 104910..105740 + 276 157159564 ftsQ EcHS_A0099 - cell division protein FtsQ 98 52.18 0 105737..106999 + 420 157159565 ftsA EcHS_A0100 - cell division protein FtsA 99 54.17 0 107060..108211 + 383 157159566 ftsZ EcHS_A0101 - cell division protein FtsZ 100 51.09 0 108312..109229 + 305 157159567 lpxC EcHS_A0102 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 50.69 MEAN 5.39 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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