version 1.0
Uncultured methanogenic archaeon RC-I, complete genome - 1..3179916 3085 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 55.31 0 281..1099 + 272 147918683 ppnK LRC51 - NAD(+) kinase 2 58.06 0 1487..2392 + 301 147918684 - LRC50 - hypothetical protein 3 55.37 0 2481..3383 + 300 147918685 - LRC49 - hypothetical protein 4 58.41 0 3836..5374 - 512 147918686 - LRC48 - hypothetical protein 5 58.91 0 5374..6714 - 446 147918687 rad25 LRC47 - putative DNA repair protein 25 6 53.09 0 6871..7533 + 220 147918688 prx1-2 LRC46 - 1-cysteine peroxiredoxin 7 56.24 0 7578..8210 + 210 147918689 - LRC45 - hypothetical protein 8 52.27 0 8317..8823 - 168 147918690 - LRC44 - hypothetical protein 9 59.44 0 8857..10239 - 460 147918691 - LRC43 - glycerol-3-phosphate dehydrogenase 10 56.00 0 10626..12125 + 499 147918692 - LRC42 - hypothetical protein 11 57.77 0 12127..13104 + 325 147918693 - LRC41 - hypothetical protein 12 56.39 0 13172..14047 - 291 147918694 - LRC40 - hypothetical protein 13 57.17 0 14189..15157 + 322 147918695 rfc LRC39 - replication factor C small subunit 14 61.00 0 15326..15784 + 152 147918696 - LRC37 - hypothetical protein 15 54.17 0 16189..16644 - 151 147918697 - LRC36 - hypothetical protein 16 57.18 0 16631..18001 - 456 147918698 - LRC35 - hypothetical protein 17 56.38 0 18348..18833 - 161 147918699 - LRC34 - hypothetical protein 18 51.85 0 19033..19302 + 89 147918700 - LRC33 - hypothetical protein 19 56.37 0 19387..19959 + 190 147918701 - LRC32 - hypothetical protein 20 58.21 0 19995..20621 - 208 147918702 - LRC31 - hypothetical protein 21 60.95 0 20761..21582 - 273 147918703 - NRC1 - hypothetical protein 22 58.46 0 22195..23376 + 393 147918704 ftsZ-3 LRC30 - putative cell division GTPase Z 23 50.46 -1 23461..23676 + 71 147918705 secE LRC29 - preprotein translocase subunit SecE 24 58.99 0 23688..24182 + 164 147918706 nusG LRC28 - transcription antitermination protein NusG 25 50.52 -1 24396..24872 + 158 147918707 rpl11p LRC27 - 50S ribosomal protein L11P 26 54.67 0 24975..25616 + 213 147918708 rpl1P LRC26 - 50S ribosomal protein L1P 27 56.72 0 25619..26533 + 304 147918709 rplP0 LRC25 - acidic ribosomal protein P0 28 60.90 0 26556..26867 + 103 147918710 rpl12p LRC24 - 50S ribosomal protein L12P 29 55.82 0 27034..27798 + 254 147918711 - LRC23 - KaiC family ATPase 30 58.27 0 27925..28722 + 265 147918712 - LRC22 - hypothetical protein 31 55.75 0 28797..29666 + 289 147918713 rfbD-2 LRC21 - dTDP-4-dehydrorhamnose reductase 32 49.00 -1 29673..29921 - 82 147918714 - LRC20 - hypothetical protein 33 60.49 0 30058..32517 - 819 147918715 - LRC18 - putative proteinase 34 57.82 0 33220..34383 + 387 147918716 ftsZ-2 LRC17 - putative cell division GTPase Z 35 50.98 0 34515..34871 + 118 147918717 - LRC16 - hypothetical protein 36 54.97 0 34994..36823 + 609 147918718 - LRC15 - hypothetical protein 37 55.84 0 37527..38828 + 433 147918719 paaK-3 LRC14 - putative phenylacetate--coenzyme A ligase 38 57.89 0 38912..40222 + 436 147918720 paaK-2 LRC13 - putative phenylacetate--coenzyme A ligase 39 58.16 0 40248..40682 + 144 147918721 - LRC11 - amino acid-binding protein 40 55.00 0 41133..42161 - 342 147918722 - LRC10 - hypothetical protein 41 52.27 0 42344..42607 - 87 147918723 - LRC9 - hypothetical protein 42 53.12 0 42615..43256 + 213 147918724 - LRC8 - hypothetical protein 43 55.96 0 43289..44539 - 416 147918725 paaK-1 LRC7 - putative phenylacetate--coenzyme A ligase 44 54.74 0 45158..45526 - 122 147918726 mutSa LRC6 - putative DNA mismatch repair protein, C-terminal fragment 45 55.71 0 45568..47265 - 565 147918727 mutSb LRC5 - putative DNA mismatch repair protein, N-terminal fragment 46 56.37 0 47380..48078 - 232 147918728 - LRC4 - hypothetical protein 47 57.56 0 48196..50436 - 746 147918729 - LRC3 - ATP-dependent RNA helicase 48 56.27 0 50423..51403 - 326 147918730 - LRC2 - hypothetical protein 49 58.18 0 52184..53833 - 549 147918731 hsp60-4 RM7 - chaperonin Hsp60 (GroEL-like) 50 57.49 0 53976..54422 - 148 147918732 - RRC535 - hypothetical protein 51 49.59 -1 54512..54874 - 120 147918733 - RRC534 - hypothetical protein 52 53.24 0 55430..56323 + 297 147918734 - RM2 - hypothetical protein 53 55.53 0 56927..58138 + 403 147918735 pgk-2 RRC531 - 3-phosphoglycerate kinase 54 50.31 -1 58363..59499 + 378 147918736 mscS-5 RRC528 - putative small-conductance mechanosensitive ion channel 55 53.76 0 59513..60070 - 185 147918737 - RRC526 - uracil-DNA glycosylase superfamily protein 56 55.92 0 60121..61869 - 582 147918738 - RRC525 - hypothetical protein 57 53.91 0 61996..62340 - 114 147918739 - RRC524 - hypothetical protein 58 56.74 0 62512..62793 - 93 147918740 - RRC523 - hypothetical protein 59 57.28 0 62795..64402 - 535 147918741 - RRC522 - hypothetical protein 60 53.77 0 64613..65209 + 198 147918742 - RRC521 - hypothetical protein 61 55.17 0 65243..66016 - 257 147918743 dphB RRC519 - diphthine synthase 62 54.49 0 66054..67022 - 322 147918744 - RRC517 - hypothetical protein 63 48.29 -1 67197..68339 + 380 147918745 - RRC516 - hypothetical protein 64 55.23 0 68434..69447 + 337 147918746 - RRC515 - putative SAM-dependent methyltransferase 65 56.94 0 70023..70814 - 263 147918747 aqpM RRC514 - putative aquaporin 66 57.86 0 70849..72369 - 506 147918748 - RRC513 - hypothetical protein 67 44.65 -2 73064..73708 + 214 147918749 - RRC511 - hypothetical protein 68 57.62 0 73712..74827 - 371 147918750 - RRC510 - FMN oxidoreductase 69 53.45 0 75509..76030 + 173 147918751 - RRC508 - hypothetical protein 70 56.57 0 76088..77305 - 405 147918752 - RRC507 - major facilitator superfamily permease 71 56.15 0 77389..77835 + 148 147918753 - RRC506 - signal transduction protein 72 55.14 0 78034..78519 - 161 147918754 flr RRC505 - putative flavoredoxin 73 59.84 0 78822..79202 - 126 147918755 - RRC504 - hypothetical protein 74 51.41 0 79510..79935 - 141 147918756 - RRC502 - pyridoxamine 5'-phosphate oxidase family protein 75 43.75 -2 79948..80187 + 79 147918757 - NRC29 - hypothetical protein 76 57.66 0 80257..81111 + 284 147918758 hibD RRC500 - putative 3-hydroxyisobutyrate dehydrogenase 77 57.22 0 81128..82090 - 320 147918759 pfkA RRC499 - ATP-dependent 6-phosphofructokinase 78 55.07 0 82188..83015 + 275 147918760 - RRC498 - hypothetical protein 79 56.61 0 83360..84532 + 390 147918761 - RRC497 - alanyl-tRNS synthetase-related protein 80 56.50 0 84663..85262 + 199 147918762 - RRC496 - hypothetical protein 81 53.68 0 85281..85919 - 212 147918763 - RRC495 - hypothetical protein 82 51.40 0 86286..86750 + 154 147918764 - RM1 - hypothetical protein 83 54.64 0 86747..87844 - 365 147918765 - RRC493 - hypothetical protein 84 56.87 0 87973..88860 + 295 147918766 - RRC492 - hypothetical protein 85 56.97 0 88904..90295 - 463 147918767 - RRC491 - hypothetical protein 86 49.59 -1 90450..90812 + 120 147918768 - RRC490 - putative response regulator (CheY-like) 87 54.87 0 90814..91491 - 225 147918769 - RRC489 - riboflavin specific deaminase 88 58.36 0 91535..92329 - 264 147918770 - RRC488 - hypothetical protein 89 45.28 -1 92366..92725 + 119 147918771 - RRC487 - hypothetical protein 90 51.09 0 93605..93925 - 106 147918772 - RRC486 - ArsR family transcriptional regulator 91 55.31 0 94209..95141 - 310 147918773 - RRC485 - hypothetical protein 92 56.15 0 95277..95951 - 224 147918774 - RRC483 - molybdopterin-binding protein (CinA-like) 93 54.33 0 95953..96633 - 226 147918775 - RRC482 - hypothetical protein 94 57.43 0 97027..98715 + 562 147918776 sat RRC481 - sulfate adenylyltransferase (sulfurylase) 95 56.72 0 98722..99666 - 314 147918777 - RRC480 - putative trypsin-like protease 96 58.04 0 99815..100405 + 196 147918778 - RRC479 - hypothetical protein 97 50.60 0 100551..102398 + 615 147918779 - RRC477 - putative signal transduction histidine kinase 98 49.88 -1 102556..102960 + 134 147918780 - RRC476 - putative response regulator (CheY-like) 99 53.24 0 102978..104273 - 431 147918781 - RRC475 - arsenical pump membrane family protein 100 57.56 0 104270..105082 - 270 147918782 pheA RRC474 - putative prephenate dehydratase 55.81 MEAN 5.27 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.