version 1.0
Clostridium botulinum B str. Eklund 17B, complete genome - 1..3800327 3473 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 28.59 0 175..1545 + 456 187935721 dnaA CLL_A0001 - chromosomal replication initiator protein DnaA 2 26.16 0 1806..2906 + 366 187933007 dnaN CLL_A0002 - DNA polymerase III, beta subunit 3 26.57 0 2945..3151 + 68 187934192 yaaA CLL_A0003 - S4 domain protein YaaA 4 24.49 0 3223..4308 + 361 187932670 - CLL_A0004 - DNA replication and repair protein RecF 5 26.44 0 4323..4583 + 86 187933074 - CLL_A0005 - hypothetical protein 6 30.45 0 4619..6526 + 635 187934052 gyrB CLL_A0006 - DNA gyrase, B subunit 7 29.06 0 6549..9098 + 849 187934554 gyrA CLL_A0007 - DNA gyrase, A subunit 8 20.44 -2 14679..15182 + 167 187935109 - CLL_A0014 - hypothetical protein 9 24.76 0 15223..15735 + 170 187934116 - CLL_A0015 - transcriptional regulator 10 26.01 0 15749..17140 + 463 187934028 - CLL_A0016 - FAD-dependent oxidoreductase 11 25.32 0 17159..17395 + 78 187935589 - CLL_A0017 - hypothetical protein 12 29.89 0 17710..18987 + 425 187934733 serS CLL_A0018 - seryl-tRNA synthetase 13 24.28 -1 20244..20762 + 172 187934457 - CLL_A0023 - GCN5-related N-acetyltransferase 14 27.12 0 20791..24249 + 1152 187932856 addB CLL_A0024 - ATP-dependent nuclease subunit B 15 26.50 0 24275..28006 + 1243 187935208 addA CLL_A0025 - recombination helicase AddA 16 23.00 -1 28288..29439 - 383 187934401 - CLL_A0026 - ErfK/YbiS/YcfS/YnhG family protein 17 22.10 -1 29595..30404 + 269 187934016 - CLL_A0027 - hypothetical protein 18 29.83 0 30462..31631 - 389 187935540 - CLL_A0028 - sodium:dicarboxylate symporter family protein 19 23.30 -1 31969..32865 + 298 187934967 - CLL_A0029 - sensory box histidine kinase 20 27.71 0 33191..34345 - 384 187932470 - CLL_A0031 - DNA integration/recombination/invertion protein 21 26.67 0 34346..34930 - 194 187933844 - CLL_A0032 - adenine-specific DNA methyltransferase 22 24.16 -1 35125..35451 + 108 187934134 - CLL_A0033 - putative viral A-type inclusion protein 23 24.30 -1 35747..37507 + 586 187935270 - CLL_A0034 - hypothetical protein 24 21.52 -1 37765..38001 + 78 187932493 - CLL_A0035 - hypothetical protein 25 30.30 0 38124..38354 + 76 187932862 - CLL_A0036 - hypothetical protein 26 22.88 -1 38370..38522 + 50 187933629 - CLL_A0037 - hypothetical protein 27 32.19 +1 38712..39938 + 408 187934144 - CLL_A0038 - phage portal protein 28 33.15 +1 39901..40458 + 185 187932875 - CLL_A0039 - phage prohead protease, HK97 family 29 32.84 +1 40460..41686 + 408 187933674 - CLL_A0040 - phage major capsid protein, HK97 family 30 32.18 +1 41862..42122 + 86 187934888 - CLL_A0041 - putative DNA packaging protein 31 27.44 0 42127..42669 + 180 187935699 - CLL_A0042 - prophage LambdaBa02, site-specific recombinase, phage integrase family 32 33.33 +1 42839..43150 + 103 187935124 - CLL_A0043 - prophage LambdaBa04, Gp54 33 28.70 0 43250..43594 + 114 187932685 - CLL_A0044 - hypothetical protein 34 31.51 0 43594..45234 + 546 187933402 - CLL_A0045 - putative phage terminase, large subunit 35 26.73 0 45277..45594 + 105 187934610 - CLL_A0046 - putative phage head-tail adaptor 36 25.21 0 45612..46313 + 233 187935479 - CLL_A0047 - RNA polymerase sigma-F factor 37 27.43 0 46314..46652 + 112 187933130 - CLL_A0048 - sigma-70, region 4 family 38 23.07 -1 47083..48222 + 379 187933204 - CLL_A0049 - hypothetical protein 39 27.72 0 48363..49253 - 296 187932700 psd CLL_A0050 - phosphatidylserine decarboxylase 40 27.60 0 49414..49989 + 191 187934009 - CLL_A0051 - transcriptional regulator, TetR family 41 31.89 +1 50301..52031 + 576 187932889 - CLL_A0052 - hydrogenase-1 42 25.22 0 52291..53079 + 262 187933673 - CLL_A0053 - HAD-superfamily hydrolase 43 31.08 0 53133..54728 - 531 187932894 - CLL_A0054 - ABC transporter, ATP-binding protein 44 30.06 0 55218..56531 + 437 187935171 - CLL_A0055 - sodium:neurotransmitter symporter family protein 45 27.78 0 56664..57311 - 215 187934459 - CLL_A0056 - hemolysin-3 46 22.34 -1 57530..58111 + 193 187933225 - CLL_A0057 - hypothetical protein 47 26.87 0 58112..59812 + 566 187932478 - CLL_A0058 - isopentenyl-diphosphate delta-isomerase 48 24.08 -1 59901..60419 + 172 187935057 - CLL_A0059 - putative lipoprotein 49 28.76 0 60692..62047 - 451 187934054 - CLL_A0060 - membrane protein 50 26.37 0 62297..63991 + 564 187933061 - CLL_A0061 - methyl-accepting chemotaxis sensory transducer 51 29.63 0 64352..65161 + 269 187935580 proB CLL_A0062 - glutamate 5-kinase 52 31.49 0 65176..66420 + 414 187934564 proA CLL_A0063 - glutamate-5-semialdehyde dehydrogenase 53 25.40 0 66522..66962 + 146 187933586 - CLL_A0064 - acetyltransferase 54 23.87 -1 67148..67654 + 168 187932630 - CLL_A0065 - bacterial membrane flanked domain family 55 22.17 -1 67845..69062 + 405 187935111 - CLL_A0066 - bacterial membrane flanked domain family 56 28.02 0 69289..70059 + 256 187932564 - CLL_A0067 - short chain dehydrogenase 57 26.08 0 70216..71028 + 270 187935134 - CLL_A0068 - HAD superfamily hydrolase 58 26.34 0 71127..72584 + 485 187932726 - CLL_A0069 - methyl-accepting chemotaxis protein 59 31.05 0 72952..74001 + 349 187933326 carA CLL_A0070 - carbamoyl-phosphate synthase, small subunit 60 30.84 0 74016..77225 + 1069 187934720 carB CLL_A0071 - carbamoyl-phosphate synthase, large subunit 61 27.39 0 77269..78378 - 369 187935260 - CLL_A0072 - HD-GYP hydrolase domain containing protein 62 28.63 0 78671..80563 - 630 187933927 - CLL_A0073 - glutamine synthetase 63 27.41 0 80881..81657 + 258 187934900 murI CLL_A0074 - glutamate racemase 64 33.52 +1 81796..82320 + 174 187932397 - CLL_A0075 - peptidyl-prolyl cis-trans isomerase 65 30.35 0 82501..82869 + 122 187933394 - CLL_A0076 - hypothetical protein 66 27.50 0 82871..83539 + 222 187933619 - CLL_A0077 - DNA-binding protein 67 30.41 0 83639..85483 + 614 187934074 - CLL_A0078 - CspB 68 30.41 0 85553..86884 + 443 187935424 - CLL_A0079 - spore cortex-lytic enzyme SleC 69 28.59 0 86925..87830 - 301 187934625 - CLL_A0080 - radical SAM domain protein 70 26.72 0 87980..89038 - 352 187933911 - CLL_A0081 - transporter 71 26.80 0 89173..90243 + 356 187933173 - CLL_A0082 - putative lipoprotein 72 30.67 0 90336..91274 + 312 187932373 - CLL_A0083 - radical SAM protein, family 73 26.64 0 91275..91991 + 238 187934975 - CLL_A0084 - probable 2-phosphosulfolactate phosphatase 74 29.30 0 92015..93205 - 396 187933779 - CLL_A0085 - PUA domain containing protein 75 29.52 0 93643..93852 - 69 187932813 - CLL_A0086 - hypothetical protein 76 25.44 0 94170..94853 + 227 187934991 - CLL_A0087 - DNA-binding response regulator 77 25.94 0 94859..96130 + 423 187934447 - CLL_A0088 - sensor histidine kinase 78 26.64 0 96428..97114 + 228 187933073 - CLL_A0089 - VTC domain superfamily 79 27.25 0 97149..97838 + 229 187932535 - CLL_A0090 - tubulin/FtsZ, GTPase 80 28.73 0 97955..100084 + 709 187934673 - CLL_A0091 - CotH protein 81 30.30 0 100377..102356 + 659 187933696 - CLL_A0092 - 2', 3'-cyclic nucleotide 2'-phosphodiesterase 82 31.51 0 103159..106287 + 1042 187932895 ileS CLL_A0093 - isoleucyl-tRNA synthetase 83 28.53 0 106394..107392 + 332 187935410 - CLL_A0094 - catabolite control protein A 84 22.54 -1 107674..108099 + 141 187933565 - CLL_A0095 - hypothetical protein 85 28.62 0 108224..109603 + 459 187932573 - CLL_A0096 - mate efflux family protein 86 24.19 -1 109655..109840 - 61 187932348 - CLL_A0097 - hypothetical protein 87 30.03 0 109950..110525 + 191 187935274 - CLL_A0098 - hypothetical protein 88 29.36 0 110541..111068 + 175 187934806 - CLL_A0099 - hypothetical protein 89 24.62 0 111172..111504 + 110 187933325 - CLL_A0100 - hypothetical protein 90 26.19 0 111690..113300 + 536 187933665 - CLL_A0101 - ABC1 family protein kinase 91 32.46 +1 113901..115619 + 572 187932898 - CLL_A0102 - Na+/H+ antiporter family family 92 28.63 0 115847..117631 + 594 187934484 - CLL_A0103 - Xaa-Pro aminopeptidase 1 93 28.68 0 117705..117833 - 42 187935258 - CLL_A0104 - hypothetical protein 94 28.57 0 117841..118092 + 83 187932878 - CLL_A0105 - hypothetical protein 95 26.21 0 118299..119702 + 467 187933710 - CLL_A0106 - AAA superfamily ATPase with N- receiver domain 96 29.11 0 119829..120752 + 307 187934901 - CLL_A0107 - hydrolase, alpha/beta fold family 97 37.87 +2 121218..121922 + 234 187934211 - CLL_A0108 - glycerol uptake facilitator protein 98 33.33 +1 122016..123014 + 332 187934947 dhaK CLL_A0109 - dihydroxyacetone kinase, DhaK subunit 99 30.83 0 123105..123743 + 212 187932757 - CLL_A0110 - dihydroxyacetone kinase, L subunit 100 33.08 +1 123746..124135 + 129 187933499 - CLL_A0111 - dihydroxyacetone kinase, phosphotransfer subunit 27.99 MEAN 3.63 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.