IslandPathversion 1.0

IslandPath Analysis: Salmonella enterica subsp. enterica serovar Enteritidis str. P125109



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 52.44 STD DEV: 5.35
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109, complete genome - 1..4685848
4206 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 56.15	0	101..2563	+	820	207855517	thrA	SEN0001	-	aspartokinase I/homoserine dehydrogenase I
2	 57.74	0	2565..3494	+	309	207855518	thrB	SEN0002	-	homoserine kinase
3	 56.25	0	3498..4784	+	428	207855519	thrC	SEN0003	-	threonine synthase
4	 50.52	0	4878..5651	-	257	207855520	yaaA	SEN0004	-	hypothetical protein
5	 55.63	0	5730..7160	-	476	207855521	yaaJ	SEN0005	-	putative amino-acid transport protein
6	 54.40	0	7429..8382	+	317	207855522	talB	SEN0006	-	transaldolase B
7	 56.01	0	8493..9083	+	196	207855523	mog	SEN0007	-	molybdopterin biosynthesis Mog protein
8	 54.32	0	9140..9706	-	188	207855524	yaaH	SEN0008	-	integral membrane protein
9	 54.20	0	9856..10569	-	237	207855525	htgA	SEN0009	-	hypothetical protein
10	 49.88	0	10605..11009	-	134	207855526	yaaI	SEN0010	-	possible exported protein
11	 52.37	0	11358..13274	+	638	207855527	dnaK	SEN0011	-	DnaK protein (heat shock protein 70)
12	 54.04	0	13360..14499	+	379	207855528	dnaJ	SEN0012	-	DnaJ protein
13	 40.40	-2	14780..15727	+	315	207855529	-	SEN0013	-	putative regulatory protein
14	 40.58	-2	15854..16198	+	114	207855530	-	SEN0014	-	hypothetical protein
15	 51.12	0	16259..16792	-	177	207855531	-	SEN0015	-	hypothetical protein
16	 38.51	-2	16809..17252	-	147	207855532	-	SEN0016	-	hypothetical protein
17	 51.14	0	17633..19732	+	699	207855533	-	SEN0017	-	putative chitinase
18	 54.89	0	19824..22820	+	998	207855534	-	SEN0018	-	putative chitinase
19	 46.81	-1	23101..23805	+	234	207855535	-	SEN0019	-	hypothetical protein
20	 51.75	0	24235..24777	+	180	207855536	bcfA	SEN0020	-	fimbrial subunit
21	 50.95	0	24878..25564	+	228	207855537	bcfB	SEN0021	-	fimbrial chaperone
22	 54.46	0	25569..28190	+	873	207855538	bcfC	SEN0022	-	fimbrial usher protein
23	 50.10	0	28191..29198	+	335	207855539	bcfD	SEN0023	-	fimbrial subunit
24	 49.27	0	29199..29744	+	181	207855540	bcfF	SEN0024	-	fimbrial subunit
25	 55.88	0	29760..30278	+	172	207855541	bcfG	SEN0025	-	fimbrial subunit
26	 54.10	0	30244..30975	+	243	207855542	bcfH	SEN0026	-	fimbrial chaperone
27	 55.08	0	31039..31884	+	281	207855543	bcfH	SEN0027	-	hypothetical protein
28	 41.82	-1	31881..32210	+	109	207855544	-	SEN