IslandPathversion 1.0

IslandPath Analysis: Bacillus licheniformis ATCC 14580



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 46.10 STD DEV: 4.62
Bacillus licheniformis ATCC 14580, complete genome - 1..4222597
4178 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 43.18	0	507..1847	+	446	52078492	dnaA	BL00076	-	chromosomal replication initiation protein
2	 44.59	0	2024..3160	+	378	52078493	dnaN	BL00077	-	DNA polymerase III subunit beta
3	 46.30	0	3328..3543	+	71	163119170	yaaA	BL00078	-	hypothetical protein
4	 42.77	0	3560..4672	+	370	52078495	recF	BL00079	-	recombination protein F
5	 41.15	-1	4690..4932	+	80	52078496	yaaB	BL00080	-	YaaB
6	 47.24	0	4986..6905	+	639	52078497	gyrB	BL00081	-	DNA gyrase subunit B
7	 46.58	0	7096..9564	+	822	52078498	gyrA	BL00082	-	DNA gyrase subunit A
8	 39.78	-1	14981..15958	-	325	163119171	yaaC	BL02362	-	hypothetical protein
9	 46.63	0	16080..17546	+	488	52078500	guaB	BL02350	-	inositol-5-monophosphate dehydrogenase
10	 43.97	0	17701..19026	+	441	52078501	dacA	BL02352	-	D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5)
11	 50.51	0	19213..20097	+	294	52078502	pdxS	BL02353	-	pyridoxine biosynthesis protein
12	 49.24	0	20119..20709	+	196	52078503	pdxT	BL02354	-	glutamine amidotransferase subunit PdxT
13	 47.42	0	21037..22314	+	425	52078504	serS	BL02355	-	seryl-tRNA synthetase
14	 51.64	+1	22344..23474	-	376	52078505	glxK	BL02363	-	glycerate kinase GlxK
15	 53.11	+1	23490..24758	-	422	52078506	gntT	BL02364	-	putative gluconate transporter
16	 44.95	0	24848..25966	-	372	52078507	-	BL02365	-	putative sugar diacid recognition protein
17	 39.72	-1	25996..26418	-	140	52078508	-	BL05000	-	heavy metal transport/detoxification protein
18	 43.46	0	26773..27414	-	213	52078509	dck	BL02366	-	deoxyadenosine/deoxycytidine kinase
19	 41.03	-1	27411..28034	-	207	52078510	dgk	BL02367	-	deoxyguanosine kinase
20	 51.67	+1	28121..29440	-	439	52078511	yaaH	BL02368	-	glycoside hydrolase family protein
21	 41.25	-1	29478..30020	-	180	52078512	yaaI	BL02370	-	putative isochorismatase hydrolase YaaI
22	 49.75	0	30001..30591	+	196	163119172	yaaJ	BL02356	-	putative cytidine/deoxycytidylate deaminase, zinc-binding region YaaJ
23	 47.03	0	31077..32777	+	566	163119173	dnaX	BL02357	-	DNA polymerase III subunits gamma and tau
24	 42.90	0	32804..33127	+	107	163119174	yaaK	BL02358	-	hypothetical protein
25	 44.39	0	33141..33737	+	198	52078516	recR	BL02359	-	recombination protein RecR
26	 40.00	-1	33758..33982	+	74	52078517	yaaL	BL02360	-	hypothetical protein
27	 41.57	0	34047..34313	+	88	52078518	bofA	BL02361	-	BofA
28	 34.90	-2	39833..40024	+	63	163119175	csfB	BL05001	-	CsfB
29	 41.10	-1	40217..40834	+	205	52078520	xpaC	BL02506	-	XpaC
30	 43.72	0	40850..42043	+	397	52078521	yaaN	BL02507	-	putative toxic anion resistance protein YaaN
31	 46.92	0	42184..43626	+	480	52078522	yaaO	BL02508	-	putative Orn/Lys/Arg decarboxylase, C-terminal YaaO
32	 45.07	0	43623..44261	+	212	52078523	tmk	BL02509	-	thymidylate kinase
33	 44.85	0	44337..44666	+	109	52078524	yaaQ	BL02510	-	YaaQ
34	 39.91	-1	44678..45118	+	146	163119176	yaaR	BL05002	-	hypothetical protein
35	 43.23	0	45130..46119	+	329	52078526	holB	BL00541	-	DNA polymerase III subunit delta'
36	 45.89	0	46122..46949	+	275	52078527	yaaT	BL00539	-	putative signal peptidase II YaaT
37	 40.50	-1	46964..47326	+	120	52078528	yabA	BL00538	-	DNA replication intiation control protein YabA
38	 44.35	0	47391..48134	+	247	52078529	yabB	BL00537	-	hypothetical protein
39	 44.22	0	48121..48414	+	97	52078530	yazA	BL00536	-	GIY-YIG nuclease superfamily protein
40	 46.87	0	48386..49264	+	292	163119177	yabC	BL00535	-	methyltransferase
41	 38.95	-1	49313..49597	-	94	52078532	abrB	BL00502	-	transcriptional regulator AbrB
42	 45.80	0	50111..52099	+	662	52078533	metS	BL00533	-	methionyl-tRNA synthetase
43	 45.18	0	52184..52951	+	255	52078534	yabD	BL00532	-	putative TatD-related deoxyribonuclease YabD
44	 44.12	0	53068..54393	+	441	163119178	yabE	BL00531	-	hypothetical protein
45	 48.66	0	54561..55121	+	186	52078536	rnmV	BL00530	-	ribonuclease M5
46	 47.67	0	55114..55992	+	292	52078537	ksgA	BL00529	-	dimethyladenosine transferase
47	 44.67	0	56152..57033	+	293	163119179	yabG	BL00528	-	spore coat assembly peptidase U57, YabG
48	 42.15	0	57258..57518	+	86	52078539	veg	BL00527	-	hypothetical protein
49	 46.77	0	57675..57860	+	61	52078540	sspF	BL00526	-	small acid-soluble spore protein (alpha/beta-type SASP)
50	 48.16	0	58158..59027	+	289	163119180	ispE	BL00525	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
51	 46.04	0	59084..59917	+	277	52078542	purR	BL00523	-	purine operon repressor
52	 48.94	0	59935..60312	+	125	52078543	yabJ	BL00522	-	putative regulator of purine operon, putative translation initiation inhibitor
53	 43.88	0	60492..60785	+	97