version 1.0
Prochlorococcus marinus str. MIT 9301, complete genome - 1..1641879 1907 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 30.14 0 170..1327 + 385 126695338 dnaN P9301_00001 - DNA polymerase III subunit beta 2 28.11 0 1329..2036 + 235 126695339 - P9301_00011 - hypothetical protein 3 32.61 0 2040..4379 + 779 126695340 - P9301_00021 - phosphoribosylformylglycinamidine synthase II 4 33.47 0 4427..5887 + 486 126695341 purF P9301_00031 - amidophosphoribosyltransferase 5 27.35 0 5884..8325 - 813 126695342 - P9301_00041 - DNA gyrase/topoisomerase IV, subunit A 6 27.31 0 8403..9266 - 287 126695343 - P9301_00051 - TPR-repeat pilus assembly protein TadD 7 32.39 0 9263..10219 - 318 126695344 - P9301_00061 - hypothetical protein 8 33.20 0 10366..11100 + 244 126695345 - P9301_00071 - hypothetical protein 9 29.94 0 11104..11721 + 205 126695346 nusB P9301_00081 - transcription antitermination protein NusB 10 31.74 0 11784..13103 + 439 126695347 ftsY P9301_00091 - signal recognition particle docking protein FtsY 11 27.75 0 13171..14514 + 447 126695348 rsbU P9301_00101 - protein phosphatase 2C domain-containing protein 12 32.17 0 14576..15955 + 459 126695349 argH P9301_00111 - argininosuccinate lyase 13 50.15 +2 16071..16724 + 217 126695350 - P9301_00121 - RNA recognition motif-containing protein 14 30.85 0 16721..17725 - 334 126695351 - P9301_00131 - tRNA-dihydrouridine synthase A 15 34.95 0 17748..18242 + 164 126695352 - P9301_00141 - peptide methionine sulfoxide reductase domain-containing protein 16 31.81 0 18317..19036 + 239 126695353 grpE P9301_00151 - heat shock protein GrpE 17 38.67 +1 19066..20190 + 374 126695354 dnaJ P9301_00161 - DnaJ protein 18 25.11 -1 20190..20420 + 76 126695355 - P9301_00171 - hypothetical protein 19 27.12 -1 20410..21327 + 305 126695356 - P9301_00181 - GTPase 20 29.91 0 21293..21643 - 116 126695357 - P9301_00191 - hypothetical protein 21 28.30 0 21661..22554 - 297 126695358 murB P9301_00201 - UDP-N-acetylenolpyruvoylglucosamine reductase 22 27.91 0 22570..23916 - 448 126695359 murC P9301_00211 - UDP-N-acetylmuramate-alanine ligase 23 37.05 +1 24170..25192 + 340 126695360 gap2 P9301_00221 - glyceraldehyde 3-phosphate dehydrogenase(NADP+)(phosphorylating) 24 30.40 0 25193..26179 - 328 126695361 thiL P9301_00231 - putative thiamine-monophosphate kinase 25 33.52 0 26172..27263 - 363 126695362 - P9301_00241 - cyclophilin-type peptidyl-prolyl cis-trans isomerase 26 38.68 +1 27307..27867 + 186 126695363 efp P9301_00251 - elongation factor P 27 36.09 +1 27867..28373 + 168 126695364 accB P9301_00261 - biotin / lipoyl attachment:Acetyl-CoA biotin carboxyl carrier subunit 28 34.34 0 28350..29339 - 329 126695365 pdxA P9301_00271 - 4-hydroxythreonine-4-phosphate dehydrogenase 29 31.06 0 29404..30282 - 292 126695366 - P9301_00281 - nucleoside-diphosphate-sugar epimerase 30 28.14 0 30315..30545 + 76 126695367 - P9301_00291 - transcription factor TFIID (or TATA-b) 31 34.33 0 30546..30947 - 133 126695368 - P9301_00301 - HNH endonuclease:HNH nuclease 32 28.92 0 31114..31566 - 150 126695369 - P9301_00311 - type II secretion system protein-like protein 33 38.79 +1 31623..32135 - 170 126695370 - P9301_00321 - hypothetical protein 34 33.33 0 32269..32466 + 65 126695371 - P9301_00331 - hypothetical protein 35 33.33 0 32468..33631 - 387 126695372 dhsS P9301_00341 - soluble hydrogenase small subunit 36 29.47 0 33692..34804 + 370 126695373 cbiD P9301_00351 - cobalt-precorrin-6A synthase 37 33.65 0 34859..36445 + 528 126695374 guaA P9301_00361 - bifunctional GMP synthase/glutamine amidotransferase protein 38 27.36 0 36630..36947 - 105 126695375 - P9301_00371 - hypothetical protein 39 28.54 0 37790..39103 - 437 126695376 - P9301_00381 - hypothetical protein 40 27.70 0 39429..40937 - 502 126695377 - P9301_00391 - TPR repeat-containing protein 41 28.43 0 41480..42193 + 237 126695378 - P9301_00401 - hypothetical protein 42 30.71 0 42273..42881 + 202 126695379 - P9301_00411 - hypothetical protein 43 21.53 -2 42990..43133 + 47 126695380 - P9301_00421 - hypothetical protein 44 32.73 0 43289..44935 + 548 126695381 - P9301_00431 - putative penicillin-binding protein 45 30.29 0 44958..45482 - 174 126695382 - P9301_00441 - putative reductase 46 32.78 0 45500..47302 - 600 126695383 - P9301_00451 - flavoprotein 47 34.40 0 47319..49094 - 591 126695384 - P9301_00461 - flavoprotein 48 31.19 0 49214..51874 + 886 126695385 alaS P9301_00471 - alanyl-tRNA synthetase 49 29.33 0 51859..53805 - 648 126695386 speA P9301_00481 - arginine decarboxylase 50 34.64 0 53928..54386 + 152 126695387 ndk P9301_00491 - nucleoside diphosphate kinase 51 31.80 0 54390..55499 - 369 126695388 dadA P9301_00501 - putative thiamine biosynthesis oxidoreductase 52 31.95 0 55606..57051 + 481 126695389 gatB P9301_00511 - aspartyl/glutamyl-tRNA amidotransferase subunit B 53 26.05 -1 57055..57672 - 205 126695390 coaE P9301_00521 - putative dephospho-CoA kinase 54 33.33 0 57749..58987 + 412 126695391 argJ P9301_00531 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 55 29.54 0 59311..62076 - 921 126695392 - P9301_00541 - hypothetical protein 56 29.99 0 62086..62832 - 248 126695393 - P9301_00551 - hypothetical protein 57 25.29 -1 62819..63253 - 144 126695394 - P9301_00561 - hypothetical protein 58 30.39 0 63318..63758 + 146 126695395 - P9301_00571 - hypothetical protein 59 23.72 -1 63799..63954 + 51 126695396 - P9301_00581 - hypothetical protein 60 39.73 +1 64299..64970 - 223 126695397 - P9301_00591 - ATPases involved in chromosome partitioning 61 31.15 0 65120..66082 + 320 126695398 tas P9301_00601 - aldo/keto reductase 62 24.64 -1 66091..66228 - 45 126695399 - P9301_00611 - hypothetical protein 63 29.78 0 66707..67831 + 374 126695400 - P9301_00621 - RNA methylase family protein 64 31.01 0 67833..68219 - 128 126695401 - P9301_00631 - hypothetical protein 65 32.68 0 68221..68682 - 153 126695402 - P9301_00641 - hypothetical protein 66 35.71 0 68849..68974 - 41 126695403 - P9301_00651 - hypothetical protein 67 35.26 0 68853..69008 + 51 126695404 - P9301_00661 - hypothetical protein 68 28.65 0 69089..69451 + 120 126695405 - P9301_00671 - hypothetical protein 69 29.85 0 69528..73118 + 1196 126695406 smc P9301_00681 - SMC ATPase superfamily chromosome segregation protein 70 34.83 0 73164..74231 + 355 126695407 - P9301_00691 - hypothetical protein 71 28.52 0 74235..75521 - 428 126695408 - P9301_00701 - lipid A disaccharide synthetase-like protein 72 37.26 +1 75867..77216 + 449 126695409 accC P9301_00711 - acetyl-CoA carboxylase biotin carboxylase subunit 73 28.76 0 77235..77540 - 101 126695410 - P9301_00721 - hypothetical protein 74 40.32 +1 77631..77816 + 61 126695411 - P9301_00731 - photosystem II protein X PsbX 75 38.92 +1 77896..78825 + 309 126695412 - P9301_00741 - hypothetical protein 76 27.90 0 78826..79101 - 91 126695413 - P9301_00751 - high light inducible protein 77 32.83 0 79110..81092 - 660 126695414 - P9301_00761 - ABC transporter, ATP binding protein 78 27.60 0 81135..81413 - 92 126695415 - P9301_00771 - hypothetical protein 79 30.41 0 81460..81801 - 113 126695416 hit P9301_00781 - HIT (histidine triad) family protein 80 33.50 0 81806..82411 - 201 126695417 def P9301_00791 - peptide deformylase 81 27.05 -1 82492..84417 + 641 126695418 dap2 P9301_00801 - esterase/lipase/thioesterase family protein 82 30.78 0 84414..85667 - 417 126695419 - P9301_00811 - putative cysteine desulfurase or selenocysteine lyase 83 27.59 0 85667..86884 - 405 126695420 - P9301_00821 - ABC transporter, membrane component 84 33.97 0 86889..87674 - 261 126695421 sufC P9301_00831 - ABC transporter, ATP binding component 85 34.40 0 87692..89194 - 500 126695422 - P9301_00841 - cysteine desulfurase activator complex subunit SufB 86 28.53 0 89231..89584 + 117 126695423 - P9301_00851 - hypothetical protein 87 34.62 0 89872..90957 + 361 126695424 - P9301_00861 - hypothetical protein 88 28.65 0 90970..91140 + 56 126695425 - P9301_00871 - membrane protein 89 33.33 0 91173..92810 + 545 126695426 pgm P9301_00881 - phosphoglucomutase 90 30.39 0 92844..94133 + 429 126695427 mgs1 P9301_00891 - recombination factor protein RarA 91 30.85 0 94130..94813 - 227 126695428 - P9301_00901 - putative 4'-phosphopantetheinyl transferase family protein 92 30.98 0 94786..95253 + 155 126695429 - P9301_00911 - putative bacterioferritin comigratory (BCP) protein 93 30.89 0 95245..95940 - 231 126695430 - P9301_00921 - transcriptional regulator 94 31.81 0 95956..96678 - 240 126695431 cysH P9301_00931 - phosphoadenosine phosphosulfate reductase 95 29.40 0 96774..97967 + 397 126695432 - P9301_00941 - putative NADH dehydrogenase, transport associated 96 34.66 0 98017..99825 + 602 126695433 citT P9301_00951 - DASS family sodium/sulfate transporter 97 32.98 0 99830..101233 + 467 126695434 trkG P9301_00961 - Trk family sodium transporter 98 36.17 +1 101252..101956 + 234 126695435 - P9301_00971 - VIC family potassium channel protein 99 30.69 0 101963..102265 - 100 126695436 - P9301_00981 - hypothetical protein 100 31.56 0 102383..102721 + 112 126695437 - P9301_00991 - hypothetical protein 31.59 MEAN 4.38 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0