version 1.0
Synechococcus sp. RCC307, complete genome - 1..2224914 2535 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 59.82 0 174..1313 + 379 148241100 dnaN SynRCC307_0001 - DNA polymerase III subunit beta 2 62.41 0 1314..2042 + 242 148241101 - SynRCC307_0002 - RNA metabolism-related protein 3 63.97 0 2082..4454 + 790 148241102 purL SynRCC307_0003 - phosphoribosylformylglycinamidine synthase II 4 60.07 0 4461..5960 + 499 148241103 purF SynRCC307_0004 - amidophosphoribosyltransferase 5 63.74 0 5970..8432 - 820 148241104 gyrA SynRCC307_0005 - DNA gyrase/topoisomerase IV, subunit A 6 59.77 0 8482..9366 - 294 148241105 - SynRCC307_0006 - secreted tetratricopeptide protein 7 62.71 0 9387..10346 - 319 148241106 - SynRCC307_0007 - hypothetical protein 8 63.75 0 10330..10980 + 216 148241107 - SynRCC307_0008 - hypothetical protein 9 58.60 0 11034..11777 + 247 148241108 - SynRCC307_0009 - hypothetical protein 10 60.29 0 11781..12392 + 203 148241109 nusB SynRCC307_0010 - transcription antitermination protein NusB 11 61.78 0 12396..13868 + 490 148241110 ftsY SynRCC307_0011 - Signal recognition particle GTPase, FtsY 12 61.86 0 13911..15284 + 457 148241111 rsbU SynRCC307_0012 - Serine phosphatase RsbU, regulator of sigma subunit 13 60.01 0 15288..16700 + 470 148241112 argH SynRCC307_0013 - argininosuccinate lyase 14 69.76 +1 16813..17427 + 204 148241113 - SynRCC307_0014 - RNA-binding protein 15 63.29 0 17431..18438 - 335 148241114 dusA SynRCC307_0015 - tRNA-dihydrouridine synthase A 16 63.78 0 18406..18960 + 184 148241115 msrB SynRCC307_0016 - peptide methionine sulfoxide reductase 17 65.68 +1 18887..20209 + 440 148241116 - SynRCC307_0017 - flavoprotein 18 61.07 0 20202..21434 - 410 148241117 - SynRCC307_0018 - Type II secretory pathway, component PulF 19 61.61 0 21431..22576 - 381 148241118 pilT SynRCC307_0019 - Tfp pilus assembly protein, pilus retraction ATPase PilT 20 63.45 0 22525..24018 - 497 148241119 - SynRCC307_0020 - Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 21 63.43 0 23976..24716 + 246 148241120 grpE SynRCC307_0021 - molecular chaperone GrpE, heat shock protein 22 63.06 0 24716..25825 + 369 148241121 - SynRCC307_0022 - DnaJ-class molecular chaperone 23 62.28 0 25826..26053 + 75 148241122 - SynRCC307_0023 - hypothetical protein 24 64.36 0 26046..26912 + 288 148241123 engC SynRCC307_0024 - GTPase engC 25 60.42 0 26914..27249 - 111 148241124 - SynRCC307_0025 - hypothetical protein 26 63.07 0 27274..28191 - 305 148241125 murB SynRCC307_0026 - UDP-N-acetylmuramate dehydrogenase 27 63.61 0 28195..29634 - 479 148241126 murC SynRCC307_0027 - UDP-N-acetylmuramate-alanine ligase 28 60.23 0 29778..30803 + 341 148241127 gap1 SynRCC307_0028 - glyceraldehyde-3-phosphate dehydrogenase 29 65.03 0 30819..31796 - 325 148241128 thiL SynRCC307_0029 - thiamine monophosphate kinase 30 61.28 0 31789..32958 - 389 148241129 - SynRCC307_0030 - peptidyl-prolyl cis-trans isomerase 31 56.68 0 32924..33484 + 186 148241130 efp SynRCC307_0031 - elongation factor P 32 60.55 0 33490..33963 + 157 148241131 accB SynRCC307_0032 - biotin carboxyl carrier protein of acetyl-CoA carboxylase 33 65.35 +1 33960..34946 - 328 148241132 pdxA SynRCC307_0033 - 4-hydroxythreonine-4-phosphate dehydrogenase 34 56.01 0 34950..35315 - 121 148241133 - SynRCC307_0034 - hypothetical protein 35 63.71 0 35499..36410 - 303 148241134 wcaG SynRCC307_0035 - nucleoside-diphosphate-sugar epimerase 36 63.16 0 36426..36596 + 56 148241135 - SynRCC307_0036 - hypothetical protein 37 59.92 0 36602..37075 - 157 148241136 - SynRCC307_0037 - McrA/HNH family nuclease 38 63.16 0 37149..38747 + 532 148241137 hepA SynRCC307_0038 - SNF2 family DNA/RNA helicase 39 61.36 0 38744..39082 - 112 148241138 - SynRCC307_0039 - hypothetical protein 40 59.58 0 39089..39469 - 126 148241139 - SynRCC307_0040 - hypothetical protein 41 60.42 0 39601..39840 + 79 148241140 - SynRCC307_0041 - hypothetical protein 42 62.02 0 39865..40230 + 121 148241141 umuD SynRCC307_0042 - SOS-regulated protein 43 63.93 0 40237..41517 + 426 148241142 umuC SynRCC307_0043 - SOS-regulated protein 44 54.90 -1 41510..41815 + 101 148241143 - SynRCC307_0044 - hypothetical protein 45 50.42 -2 41919..42158 + 79 148241144 - SynRCC307_0045 - hypothetical protein 46 61.49 0 42331..42774 - 147 148241145 - SynRCC307_0046 - hypothetical protein 47 64.15 0 42834..44024 - 396 148241146 - SynRCC307_0047 - DHSS soluble hydrogenase, small subunit 48 66.27 +1 43913..45175 + 420 148241147 cbiD SynRCC307_0048 - cobalamin biosynthesis protein CbiD 49 59.93 0 45105..46796 + 563 148241148 guaA SynRCC307_0049 - bifunctional GMP synthase/glutamine amidotransferase protein 50 59.77 0 46803..47570 + 255 148241149 - SynRCC307_0050 - hypothetical protein 51 62.91 0 47613..47825 + 70 148241150 - SynRCC307_0051 - hypothetical protein 52 59.17 0 47822..49621 + 599 148241151 - SynRCC307_0052 - cell division protein FtsI / penicillin-binding protein 2 53 62.22 0 49632..50777 - 381 148241152 - SynRCC307_0053 - glycosyltransferase of family alpha-mannosyltransferase 54 60.42 0 50784..52016 - 410 148241153 - SynRCC307_0054 - sulfolipid biosynthesis protein (UDP-sulfoquinovose synthase) 55 61.99 0 52039..52209 - 56 148241154 - SynRCC307_0055 - HLIP family protein 56 63.58 0 52279..53121 - 280 148241155 thiG SynRCC307_0056 - thiazole synthase 57 62.16 0 53250..53759 + 169 148241156 - SynRCC307_0057 - hypothetical protein 58 61.46 0 53763..54281 - 172 148241157 - SynRCC307_0058 - TPR repeat-containing protein 59 63.51 0 54293..54640 - 115 148241158 rplT SynRCC307_0059 - 50S ribosomal protein L20 60 63.18 0 54683..54883 - 66 148241159 rpmI SynRCC307_0060 - 50S ribosomal protein L35 61 64.95 0 54795..56480 + 561 148241160 - SynRCC307_0061 - SpoIID sporulation protein 62 62.41 0 56504..57865 + 453 148241161 - SynRCC307_0062 - glycosyl transferase family protein 63 66.17 +1 57862..59676 - 604 148241162 dnaX SynRCC307_0063 - DNA polymerase III gamma/tau subunit 64 64.85 0 59686..60402 - 238 148241163 - SynRCC307_0064 - hypothetical protein 65 60.96 0 60341..61690 - 449 148241164 clpX SynRCC307_0065 - ATP-dependent protease ATP-binding subunit 66 59.13 0 61775..62398 - 207 148241165 clpP SynRCC307_0066 - protease subunit of ATP-dependent Clp protease 67 60.30 0 62419..63894 - 491 148241166 tig SynRCC307_0067 - trigger factor 68 62.59 0 64049..65077 + 342 148241167 asd SynRCC307_0068 - aspartate-semialdehyde dehydrogenase 69 61.00 0 65074..65973 + 299 148241168 dapA SynRCC307_0069 - dihydrodipicolinate synthase 70 61.40 0 66035..67894 + 619 148241169 - SynRCC307_0070 - metallo-beta-lactamase superfamily hydrolase 71 61.56 0 67891..68811 - 306 148241170 - SynRCC307_0071 - hypothetical protein 72 64.20 0 68811..69824 - 337 148241171 tilS SynRCC307_0072 - tRNA(Ile)-lysidine synthase 73 63.67 0 69729..70595 + 288 148241172 - SynRCC307_0073 - hypothetical protein 74 59.24 0 70629..72635 + 668 148241173 uvrB SynRCC307_0074 - excinuclease ABC subunit B 75 63.84 0 72639..74441 - 600 148241174 lysC SynRCC307_0075 - aspartate kinase 76 62.94 0 74465..75430 - 321 148241175 holA SynRCC307_0076 - DNA polymerase III subunit delta 77 65.72 +1 75424..76059 + 211 148241176 cobH SynRCC307_0077 - precorrin-8X methylmutase 78 63.92 0 76041..78698 - 885 148241177 mutS SynRCC307_0078 - DNA mismatch repair protein MutS 79 57.67 0 78830..79018 + 62 148241178 psbZ SynRCC307_0079 - photosystem II reaction center protein Z 80 60.21 0 79068..79547 + 159 148241179 ribH SynRCC307_0080 - riboflavin synthase subunit beta 81 61.95 0 79544..80434 + 296 148241180 - SynRCC307_0081 - glucose-1-phosphate thymidylyltransferase 82 61.51 0 80424..81005 + 193 148241181 rfbC SynRCC307_0082 - dTDP-4-dehydrorhamnose 3,5-epimerase 83 64.28 0 81002..81880 + 292 148241182 rfbD SynRCC307_0083 - putative dTDP-4-dehydrorhamnose reductase 84 62.52 0 81906..82991 + 361 148241183 rfbB SynRCC307_0084 - dTDP-glucose-4,6-dehydratase 85 61.96 0 83121..83609 - 162 148241184 - SynRCC307_0085 - acetyltransferase 86 60.50 0 83543..86479 + 978 148241185 secA SynRCC307_0086 - preprotein translocase subunit SecA 87 65.38 +1 86489..87190 - 233 148241186 cysE SynRCC307_0087 - Serine acetyltransferase 88 63.58 0 87193..88293 - 366 148241187 - SynRCC307_0088 - transcriptional regulator 89 63.35 0 88238..89020 + 260 148241188 - SynRCC307_0089 - putative carboxymethylenebutenolidase 90 57.56 0 89017..89664 - 215 148241189 infC SynRCC307_0090 - translation initiation factor IF-3 91 63.75 0 89712..90602 - 296 148241190 miaA SynRCC307_0091 - tRNA delta(2)-isopentenylpyrophosphatetransferase 92 57.04 0 90734..92707 + 657 148241191 gyrB SynRCC307_0092 - DNA gyrase subunit B 93 65.42 +1 92707..93027 + 106 148241192 - SynRCC307_0093 - hypothetical protein 94 57.21 0 93020..93442 + 140 148241193 - SynRCC307_0094 - hypothetical protein 95 63.29 0 93435..93848 + 137 148241194 - SynRCC307_0095 - hypothetical protein 96 60.51 0 93817..94287 - 156 148241195 - SynRCC307_0096 - glutathione peroxidase 97 61.03 0 94359..95741 + 460 148241196 mgtE SynRCC307_0097 - Mg/Co/Ni transporter MgtE 98 60.41 0 95821..96795 + 324 148241197 rpoD SynRCC307_0098 - RNA polymerase sigma factor, sigma-70 family 99 61.29 0 96761..97672 - 303 148241198 - SynRCC307_0099 - DMT family permease 100 40.96 -2 97820..98803 + 327 148241199 - SynRCC307_0100 - hypothetical protein 60.61 MEAN 4.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0