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Phenylobacterium zucineum HLK1, complete genome - 1..3996255 3529 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 69.31 0 1..870 + 289 197103467 - PHZ_c0001 - hypothetical protein 2 71.86 0 867..1463 + 198 197103468 - PHZ_c0002 - Maf/YceF/YhdE family protein 3 75.12 +1 1460..2323 + 287 197103469 aroE PHZ_c0003 - shikimate 5-dehydrogenase 4 72.71 0 2320..2931 + 203 197103470 coaE PHZ_c0004 - dephospho-CoA kinase 5 69.50 0 2989..3693 + 234 197103471 dnaQ PHZ_c0005 - DNA polymerase III epsilon chain 6 72.15 0 3724..4215 - 163 197103472 secB PHZ_c0006 - protein-export protein SecB 7 72.01 0 4407..5024 + 205 197103473 - PHZ_c0007 - hypothetical protein 8 75.65 +1 5457..6113 + 218 197103474 - PHZ_c0008 - transglycosylase 9 76.13 +1 6110..6616 + 168 197103475 - PHZ_c0009 - hypothetical protein 10 71.64 0 6662..8209 + 515 197103476 lpsC PHZ_c0010 - perosamine synthetase 11 75.24 +1 8134..9870 + 578 197103477 - PHZ_c0011 - putative HAD-superfamily phosphatase subfamily protein 12 71.73 0 10099..10671 + 190 197103478 - PHZ_c0012 - acetyltransferase, GNAT family 13 71.05 0 10681..11091 + 136 197103479 - PHZ_c0013 - lactoylglutathione lyase 14 68.46 0 11088..11813 + 241 197103480 - PHZ_c0014 - hypothetical protein 15 73.89 0 11810..13069 - 419 197103481 - PHZ_c0015 - hypothetical protein 16 73.72 0 13072..14418 - 448 197103482 - PHZ_c0016 - glycosyltransferase 17 67.48 -1 14844..15584 - 246 197103483 - PHZ_c0017 - hypothetical protein 18 68.60 0 15642..16157 + 171 197103484 - PHZ_c0018 - DNA-binding protein 19 71.71 0 16245..17156 + 303 197103485 - PHZ_c0019 - thioredoxin 20 70.76 0 17170..17829 + 219 197103486 - PHZ_c0020 - ATP-dependent protease La domain protein 21 71.01 0 17839..18045 + 68 197103487 lpxK PHZ_c0021 - tetraacyldisaccharide-1-P 4-kinase 22 75.14 +1 18046..19308 - 420 197103488 ubiH PHZ_c0022 - 2-octaprenyl-6-methoxyphenol hydroxylase 23 74.56 0 19445..20584 + 379 197103489 - PHZ_c0023 - HlyD family secretion protein 24 68.14 -1 20595..22223 + 542 197103490 - PHZ_c0024 - multidrug efflux transporter, permease protein 25 72.25 0 22223..22831 + 202 197103491 - PHZ_c0025 - transcriptional regulator, TetR family 26 69.23 0 22839..23657 - 272 197103492 fabI PHZ_c0026 - enoyl-(acyl-carrier protein) reductase (NADH) 27 78.49 +2 23729..23914 - 61 197103493 - PHZ_c0027 - hypothetical protein 28 70.45 0 23951..25165 - 404 197103494 fabB PHZ_c0028 - 3-oxoacyl-(acyl-carrier-protein) synthase I 29 68.94 0 25204..25731 - 175 197103495 fabA PHZ_c0029 - 3-hydroxydecanoyl-ACP dehydratase 30 74.76 +1 25792..26310 - 172 197103496 - PHZ_c0030 - hypothetical protein 31 69.21 0 26435..27418 + 327 197103497 - PHZ_c0031 - D-isomer specific 2-hydroxyacid dehydrogenases family protein 32 72.80 0 27434..28183 - 249 197103498 - PHZ_c0032 - molybdopterin biosynthesis protein 33 70.13 0 28225..28773 + 182 197103499 hslV PHZ_c0033 - heat shock protein HslV 34 76.19 +1 28760..29641 + 293 197103500 - PHZ_c0034 - hypothetical protein 35 70.80 0 29659..30963 + 434 197103501 hslU PHZ_c0035 - heat shock protein HslU 36 75.13 +1 30967..31746 + 259 197103502 - PHZ_c0036 - Zn-dependent protease with chaperone function 37 70.65 0 31743..32219 - 158 197103503 - PHZ_c0037 - hypothetical protein 38 69.19 0 32311..32985 + 224 197103504 nth PHZ_c0038 - endonuclease III 39 70.81 0 33054..34043 + 329 197103505 - PHZ_c0039 - carbohydrate kinase, PfkB family 40 67.01 -1 34062..34652 + 196 197103506 hisB PHZ_c0040 - imidazoleglycerol phosphate dehydratase 41 71.86 0 34663..35298 + 211 197103507 hisH PHZ_c0041 - amidotransferase 42 71.58 0 35286..36017 + 243 197103508 hisA PHZ_c0042 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 43 70.56 0 36014..36784 + 256 197103509 - PHZ_c0043 - hisF protein (cyclase) 44 74.55 0 36784..37113 + 109 197103510 hisE PHZ_c0044 - phosphoribosyl-ATP pyrophosphatase 45 67.71 -1 37199..37870 - 223 197103511 - PHZ_c0045 - hypothetical protein 46 68.64 0 37893..38297 - 134 197103512 - PHZ_c0046 - MAPEG family protein 47 66.18 -1 38408..38614 + 68 197103513 - PHZ_c0047 - hypothetical protein 48 67.61 -1 38611..39885 - 424 197103514 argG PHZ_c0048 - argininosuccinate synthase 49 73.77 0 39958..40323 - 121 197103515 - PHZ_c0049 - hypothetical protein 50 68.44 0 40324..42243 - 639 197103516 kup PHZ_c0050 - system potassium uptake protein 51 72.78 0 42413..43213 + 266 197103517 - PHZ_c0051 - oxidoreductase, short-chain dehydrogenase/reductase family 52 69.58 0 43221..43907 - 228 197103518 - PHZ_c0052 - multiple antibiotic transporter 53 75.53 +1 44024..44689 + 221 197103519 pyrF PHZ_c0053 - orotidine 5'-phosphate decarboxylase 54 74.63 0 44761..45237 + 158 197103520 - PHZ_c0054 - hypothetical protein 55 67.24 -1 45441..47372 + 643 197103521 dnaK PHZ_c0055 - Heat shock protein Hsp70 56 72.08 0 47545..48708 + 387 197103522 dnaJ PHZ_c0056 - chaperone protein DnaJ 57 71.85 0 48745..50673 - 642 197103523 - PHZ_c0057 - glucose dehydrogenase 58 75.46 +1 51051..51482 + 143 197103524 - PHZ_c0058 - transcription elongation factor 59 73.23 0 53242..53637 + 131 197103525 - PHZ_c0059 - transcription elongation factor GreA/GreB family 60 73.38 0 54084..55364 - 426 197103526 - PHZ_c0060 - D-amino-acid dehydrogenase 61 76.15 +1 55361..56509 - 382 197103527 alr PHZ_c0061 - alanine racemase 62 69.46 0 56624..57088 + 154 197103528 - PHZ_c0062 - transcriptional regulator, AsnC family 63 72.33 0 57173..58762 + 529 197103529 pys PHZ_c0063 - phytoene dehydrogenase 64 74.07 0 58759..59109 - 116 197103530 - PHZ_c0064 - transcriptional regulator, ArsR family 65 71.28 0 59129..62356 - 1075 197103531 - PHZ_c0065 - AcrB/AcrD/AcrF family protein 66 77.97 +1 62353..63387 - 344 197103532 - PHZ_c0066 - putative HlyD family secretion protein 67 72.18 0 63394..63756 - 120 197103533 - PHZ_c0067 - rhodanese-related sulfurtransferase 68 69.15 0 63910..65196 + 428 197103534 - PHZ_c0068 - sulfide-quinone reductase 69 72.97 0 65202..65645 + 147 197103535 - PHZ_c0069 - thioredoxin 70 67.65 -1 65671..65874 + 67 197103536 - PHZ_c0070 - hypothetical protein 71 69.27 0 66047..67429 + 460 197103537 - PHZ_c0071 - cystathionine beta-synthase 72 70.00 0 67426..68625 + 399 197103538 - PHZ_c0072 - cystathionine gamma-lyase 73 72.87 0 68654..71023 - 789 197103539 - PHZ_c0073 - pyruvate dehydrogenase E1 component 74 69.52 0 71237..72745 + 502 197103540 - PHZ_c0074 - Na+/melibiose symporter 75 76.98 +1 72704..73081 - 125 197103541 - PHZ_c0075 - hypothetical protein 76 68.64 0 73152..73811 + 219 197103542 - PHZ_c0076 - hydrolase, haloacid dehalogenase-like family 77 67.01 -1 73808..74101 + 97 197103543 - PHZ_c0077 - pterin-4-alpha-carbinolamine dehydratase 78 68.47 0 74115..74891 + 258 197103544 - PHZ_c0078 - 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase 79 74.88 +1 74907..75320 - 137 197103545 - PHZ_c0079 - hypothetical protein 80 69.23 0 75413..76465 + 350 197103546 flmA PHZ_c0080 - flagellin modification protein FlmA 81 73.83 0 76467..77624 + 385 197103547 flmB PHZ_c0081 - flagellin modification protein FlmB 82 71.50 0 77621..79336 - 571 197103548 - PHZ_c0082 - hypothetical protein 83 67.50 -1 79484..80200 + 238 197103549 - PHZ_c0083 - response regulator(with CheY-like receiver domain and winged-helix DNA-binding domain) 84 71.88 0 80169..81761 + 530 197103550 - PHZ_c0084 - sensor histidine kinase 85 73.56 0 81758..82192 + 144 197103551 - PHZ_c0085 - serine kinase of the HPr protein, regulates carbohydrate metabolism 86 66.67 -1 82252..82656 + 134 197103552 - PHZ_c0086 - phosphotransferase system, mannose/fructose-specific component IIA 87 70.20 0 82685..82939 + 84 197103553 ptsH PHZ_c0087 - phosphocarrier protein HPr 88 65.09 -1 82973..83734 - 253 197103554 - PHZ_c0088 - ABC-type multidrug transport system, permease component 89 67.21 -1 83731..84657 - 308 197103555 - PHZ_c0089 - ABC-type multidrug transport system, ATPase component 90 69.31 0 84752..85054 - 100 197103556 - PHZ_c0090 - hypothetical protein 91 70.08 0 85170..86165 - 331 197103557 bioB PHZ_c0091 - biotin synthase BioB 92 73.75 0 86237..86815 + 192 197103558 - PHZ_c0092 - hypothetical protein 93 64.80 -2 86911..88302 + 463 197103559 ahcY PHZ_c0093 - adenosylhomocysteinase 94 75.18 +1 88340..89185 + 281 197103560 pdxK PHZ_c0094 - pyridoxine kinase 95 76.34 +1 89247..89525 + 92 197103561 - PHZ_c0095 - acylphosphatase 96 72.89 0 89525..90649 + 374 197103562 estA PHZ_c0096 - esterase A 97 73.26 0 90655..91170 + 171 197103563 - PHZ_c0097 - acetyltransferase 98 72.45 0 91179..92111 - 310 197103564 - PHZ_c0098 - rarD protein 99 65.31 -1 92117..93148 - 343 197103565 asd PHZ_c0099 - aspartate-semialdehyde dehydrogenase asd 100 70.83 0 93356..93739 + 127 197103566 - PHZ_c0100 - phenylacetic acid degradation-related protein 71.49 MEAN 3.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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