version 1.0
Yersinia pestis Nepal516, complete genome - 1..4534590 3981 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 42.86 -1 270..710 - 146 108810167 - YPN_0001 - flavodoxin 2 41.34 -1 803..1264 - 153 108810168 - YPN_0002 - DNA-binding transcriptional regulator AsnC 3 45.52 0 1434..2426 + 330 108810169 - YPN_0003 - asparagine synthetase AsnA 4 47.72 0 2525..3991 - 488 108810170 yieM YPN_0004 - hypothetical protein 5 46.65 0 3995..5548 - 517 108810171 - YPN_0005 - regulatory ATPase RavA 6 45.80 0 5822..7690 + 622 108810172 trkD YPN_0006 - potassium transport protein Kup 7 48.10 0 7895..8314 + 139 108810173 - YPN_0007 - D-ribose pyranase 8 50.05 0 8365..9291 + 308 108810174 - YPN_0008 - ribokinase 9 49.71 0 9344..9514 + 56 108810175 - YPN_0009 - hypothetical protein 10 46.46 0 9511..10935 - 474 108810176 - YPN_0010 - membrane transport protein 11 44.06 0 11015..11704 - 229 108810177 - YPN_0011 - GntR-famly transcriptional regulator 12 44.52 0 18389..19318 + 309 108810178 - YPN_0012 - homoserine O-succinyltransferase 13 26.00 -2 19511..19660 - 49 108810179 - YPN_0013 - hypothetical protein 14 47.90 0 19738..21336 + 532 108810180 - YPN_0014 - malate synthase 15 51.30 0 21383..22690 + 435 108810181 - YPN_0015 - isocitrate lyase 16 46.41 0 22946..24673 + 575 108810182 aceK YPN_0016 - bifunctional isocitrate dehydrogenase kinase/phosphatase protein 17 53.70 +1 24793..25386 - 197 108810183 - YPN_0017 - repressor of aceBA operon 18 51.92 0 25852..29547 + 1231 108810184 metH YPN_0018 - B12-dependent methionine synthase 19 44.58 0 29643..34550 - 1635 108810185 - YPN_0019 - hemolysin 20 47.47 0 34620..36119 - 499 108810186 - YPN_0020 - hemolysin activator protein 21 46.84 0 36049..36396 - 115 108810187 - YPN_0021 - hypothetical protein 22 52.74 0 36877..38262 - 461 108810188 - YPN_0022 - aspartate kinase III 23 48.69 0 38632..40278 + 548 108810189 pgi YPN_0023 - glucose-6-phosphate isomerase 24 38.97 -1 40413..40820 + 135 108810190 - YPN_0024 - phosphate-starvation-inducible protein PsiE 25 52.75 0 40963..41853 - 296 108810191 malG YPN_0025 - maltose transporter permease 26 48.42 0 41867..43444 - 525 108810192 malF YPN_0026 - maltose transporter membrane protein 27 48.60 0 43631..44842 - 403 108810193 malE YPN_0027 - maltose ABC transporter periplasmic protein 28 53.59 +1 45430..45666 + 78 108810194 - YPN_0028 - hypothetical protein 29 53.51 +1 45670..46779 + 369 108810195 - YPN_0029 - maltose/maltodextrin transporter ATP-binding protein 30 48.66 0 46850..48121 + 423 108810196 lamB YPN_0030 - maltoporin 31 51.64 0 48362..49273 + 303 108810197 - YPN_0031 - maltose regulon periplasmic protein 32 31.87 -2 49612..50022 + 136 108810198 - YPN_0032 - hypothetical protein 33 48.94 0 50174..50692 - 172 108810199 - YPN_0033 - hypothetical protein 34 43.78 0 51216..51713 + 165 108810200 - YPN_0034 - hypothetical protein 35 49.60 0 51781..53262 + 493 108810201 - YPN_0035 - hypothetical protein 36 47.62 0 53269..53709 + 146 108810202 - YPN_0036 - hypothetical protein 37 48.00 0 53709..54935 + 408 108810203 - YPN_0037 - hypothetical protein 38 46.44 0 54825..55610 - 261 108810204 - YPN_0038 - transposase for insertion sequence IS1661 39 49.15 0 55664..56308 - 214 108810205 - YPN_0039 - insertion element IS1661 DNA-binding protein 40 52.56 0 56921..59557 - 878 108810206 - YPN_0040 - phosphoenolpyruvate carboxylase 41 50.43 0 59931..61094 - 387 108810207 - YPN_0041 - acetylornithine deacetylase 42 50.45 0 61345..62349 + 334 108810208 argC YPN_0042 - N-acetyl-gamma-glutamyl-phosphate reductase 43 50.97 0 62515..63291 + 258 108810209 - YPN_0043 - acetylglutamate kinase 44 50.66 0 63458..64831 + 457 108810210 - YPN_0044 - argininosuccinate lyase 45 44.36 0 65430..67922 + 830 108810211 - YPN_0045 - TonB dependent receptor protein 46 42.23 -1 68144..68761 + 205 108810212 - YPN_0046 - hemophore HasA 47 49.06 0 68918..70735 + 605 108810213 - YPN_0047 - ABC transporter protein 48 48.68 0 70811..72139 + 442 108810214 - YPN_0048 - HlyD family secretion protein 49 47.26 0 72204..73007 + 267 108810215 - YPN_0049 - membrane protein 50 51.71 0 73123..74586 - 487 108810216 - YPN_0050 - dihydrolipoamide dehydrogenase 51 46.31 0 74681..75412 - 243 108810217 - YPN_0051 - peroxiredoxin/glutaredoxin family protein 52 48.80 0 75559..76476 + 305 108810218 - YPN_0052 - DNA-binding transcriptional regulator OxyR 53 48.47 0 76459..77859 - 466 108810219 - YPN_0053 - soluble pyridine nucleotide transhydrogenase 54 51.57 0 78077..78712 + 211 108810220 - YPN_0054 - DNA-binding transcriptional repressor FabR 55 46.81 0 78725..79132 + 135 108810221 - YPN_0055 - hypothetical protein 56 47.74 0 79266..80369 - 367 108810222 - YPN_0056 - tRNA (uracil-5-)-methyltransferase 57 46.52 0 80831..82726 + 631 108810223 btuB YPN_0057 - vitamin B12/cobalamin outer membrane transporter 58 48.73 0 82671..83534 + 287 162139457 - YPN_0058 - glutamate racemase 59 46.50 0 90393..91349 + 318 108810225 - YPN_0059 - periplasmic protein precursor 60 45.88 0 91435..92925 + 496 108810226 - YPN_0060 - sugar transport system ATP-binding protein 61 48.82 0 92937..93956 + 339 108810227 - YPN_0061 - sugar transport system permease 62 45.12 0 93956..94948 + 330 108810228 - YPN_0062 - inner membrane ABC transporter permease protein YjfF 63 47.51 0 94935..95816 - 293 108810229 - YPN_0063 - transcriptional regulator HdfR 64 48.94 0 95851..96273 + 140 108810230 - YPN_0064 - hypothetical protein 65 53.41 +1 96530..98053 - 507 108810231 - YPN_0065 - magnesium chelatase family protein 66 53.25 +1 98676..100322 + 548 108810232 - YPN_0066 - acetolactate synthase 2 catalytic subunit 67 49.22 0 100319..100576 + 85 108810233 ilvM YPN_0067 - acetolactate synthase 2 regulatory subunit 68 51.56 0 100599..101525 + 308 108810234 - YPN_0068 - branched-chain amino acid aminotransferase 69 53.11 +1 101836..103686 + 616 108810235 - YPN_0069 - dihydroxy-acid dehydratase 70 53.66 +1 103692..105236 + 514 108810236 - YPN_0070 - threonine dehydratase 71 33.12 -2 105367..105831 - 154 108810237 - YPN_0071 - membrane protein 72 34.20 -2 105911..106372 - 153 108810238 - YPN_0072 - membrane protein 73 34.20 -2 106452..106913 - 153 108810239 - YPN_0073 - membrane protein 74 39.48 -1 106897..107775 - 292 108810240 - YPN_0074 - hypothetical protein 75 38.57 -1 108423..108632 + 69 108810241 - YPN_0075 - hypothetical protein 76 52.72 0 108687..109568 - 293 108810242 - YPN_0076 - DNA-binding transcriptional regulator IlvY 77 50.30 0 109854..111332 + 492 108810243 - YPN_0077 - ketol-acid reductoisomerase 78 42.79 -1 111513..111713 + 66 108810244 - YPN_0078 - hypothetical protein 79 48.09 0 111909..113351 + 480 108810245 - YPN_0079 - colicin 80 35.23 -2 113351..113614 + 87 108810246 - YPN_0080 - hypothetical protein 81 34.50 -2 114120..114377 + 85 108810247 - YPN_0081 - colicin immunity protein 82 44.65 0 114830..114988 - 52 108810248 - YPN_0082 - hypothetical protein 83 48.23 0 115012..115830 - 272 108810249 - YPN_0083 - chaperone protein 84 49.06 0 115796..117175 - 459 108810250 - YPN_0084 - hypothetical protein 85 47.11 0 117180..119807 - 875 108810251 - YPN_0085 - outer membrane usher protein 86 42.21 -1 119835..120566 - 243 108810252 - YPN_0086 - fimbrial chaperone 87 43.69 0 120630..121160 - 176 108810253 - YPN_0087 - fimbrial protein 88 49.63 0 121970..123178 - 402 108810254 - YPN_0088 - transposase for the IS285 insertion element 89 34.09 -2 123275..124066 - 263 108810255 - YPN_0089 - hypothetical protein 90 45.04 0 124305..124586 - 93 108810256 - YPN_0090 - peptidyl-prolyl cis-trans isomerase C 91 48.71 0 124790..126811 + 673 108810257 - YPN_0091 - ATP-dependent DNA helicase Rep 92 49.76 0 126979..128037 - 352 108810258 - YPN_0092 - guanosine-5'-triphosphate,3'-diphosphate diphosphatase 93 51.87 0 127968..128474 - 168 108810259 - YPN_0093 - hypothetical protein 94 48.64 0 128478..129764 - 428 108810260 - YPN_0094 - ATP-dependent RNA helicase RhlB 95 46.18 0 129883..130209 + 108 108810261 - YPN_0095 - thioredoxin 1 96 45.87 0 130689..131948 + 419 108810262 rho YPN_0096 - transcription termination factor Rho 97 46.91 0 132498..133580 + 360 108810263 - YPN_0097 - undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 98 48.49 0 133616..134677 + 353 162139456 - YPN_0098 - lipopolysaccharide biosynthesis protein WzzE 99 50.30 0 134904..136088 + 394 108810265 - YPN_0099 - UDP-N-acetylglucosamine 2-epimerase 100 49.80 0 136085..137347 + 420 108810266 wecC YPN_0100 - UDP-N-acetyl-D-mannosamine dehydrogenase 47.91 MEAN 4.91 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.