IslandPath Analysis: Streptococcus pyogenes MGAS2096



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 38.64   STD DEV: 4.01
Streptococcus pyogenes MGAS2096, complete genome - 1..1860355
1898 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 33.33	-1	202..1557	+	451	94991498	dnaA	MGAS2096_Spy0001	-	chromosomal replication initiation protein
2	 33.51	-1	1712..2848	+	378	94991499	dnaN	MGAS2096_Spy0002	-	DNA polymerase III subunit beta
3	 32.32	-1	2923..3120	+	65	94991500	-	MGAS2096_Spy0003	-	putative cytoplasmic protein
4	 37.46	0	3450..4565	+	371	94991501	-	MGAS2096_Spy0004	-	translation-associated GTPase
5	 32.03	-1	4590..5204	+	204	94991502	pth	MGAS2096_Spy0005	-	peptidyl-tRNA hydrolase
6	 35.45	0	5207..8710	+	1167	94991503	trcF	MGAS2096_Spy0006	-	transcription-repair coupling factor
7	 30.77	-1	8872..9144	+	90	94991504	-	MGAS2096_Spy0007	-	heat shock protein 15
8	 26.88	-2	9131..9502	+	123	94991505	divIC	MGAS2096_Spy0008	-	cell division protein DIVIC
9	 26.98	-2	9499..9624	+	41	94991506	-	MGAS2096_Spy0009	-	hypothetical protein
10	 31.70	-1	9637..10923	+	428	94991507	-	MGAS2096_Spy0010	-	Beta-lactamase
11	 28.59	-2	10920..12206	+	428	94991508	tilS	MGAS2096_Spy0011	-	tRNA(Ile)-lysidine synthetase TilS
12	 30.39	-2	12211..12753	+	180	94991509	-	MGAS2096_Spy0012	-	hypoxanthine-guanine phosphoribosyltransferase
13	 30.45	-2	12775..13155	+	126	94991510	-	MGAS2096_Spy0013	-	cell division protein ftsH
14	 39.31	0	13133..14755	+	540	94991511	ftsH	MGAS2096_Spy0014	-	cell division protein ftsH
15	 32.51	-1	15013..16473	+	486	94991512	-	MGAS2096_Spy0015	-	amino acid permease
16	 36.30	0	16815..16949	-	44	94991513	-	MGAS2096_Spy0016	-	hypothetical protein
17	 37.68	0	30142..30348	-	68	94991514	-	MGAS2096_Spy0017	-	transposase
18	 40.27	0	30845..32041	+	398	94991515	sibA	MGAS2096_Spy0018	-	hypothetical protein
19	 39.28	0	32282..33256	+	324	94991516	prsA2	MGAS2096_Spy0019	-	ribose-phosphate pyrophosphokinase
20	 31.35	-1	33442..34197	+	251	94991517	recO	MGAS2096_Spy0020	-	DNA repair protein RecO
21	 37.02	0	34222..35307	+	361	94991518	plsX	MGAS2096_Spy0021	-	putative glycerol-3-phosphate acyltransferase PlsX
22	 31.28	-1	35300..35542	+	80	94991519	acpP2	MGAS2096_Spy0022	-	acyl carrier protein
23	 35.78	0	35663..36397	+	244	94991520	-	MGAS2096_Spy0023	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
24	 44.54	+1	36473..40246	+	1257	94991521	-	MGAS2096_Spy0024	-	phosphoribosylformylglycinamidine synthase
25	 38.49	0	40350..41861	+	503	94991522	purF	MGAS2096_Spy0025	-	amidophosphoribosyltransferase
26	 43.70	+1	41889..42911	+	340	94991523	purM	MGAS2096_Spy0026	-	phosphoribosylaminoimidazole synthetase
27	 46.67	+2	43079..43633	+	184	94991524	purN	MGAS2096_Spy0027	-	phosphoribosylglycinamide formyltransferase
28	 47.09	+2	43817..45364	+	515	94991525	purH	MGAS2096_Spy0028	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
29	 39.64	0	45422..46546	-	374	94991526	-	MGAS2096_Spy0029	-	autolysin
30	 46.50	+1	46652..48064	+	470	94991527	purD	MGAS2096_Spy0030	-	phosphoribosylamine--glycine ligase
31	 50.20	+2	48342..48833	+	163	94991528	purE	MGAS2096_Spy0031	-	phosphoribosylaminoimidazole carboxylase catalytic subunit
32	 50.00	+2	48784..49893	+	369	94991529	purK	MGAS2096_Spy0032	-	phosphoribosylaminoimidazole carboxylase ATPase subunit
33	 28.86	-2	49914..51254	+	446	94991530	-	MGAS2096_Spy0033	-	putative cytoplasmic protein
34	 29.56	-2	51255..51413	-	52	94991531	-	MGAS2096_Spy0034	-	hypothetical protein
35	 44.62	+1	51623..52915	+	430	94991532	purB	MGAS2096_Spy0035	-	adenylosuccinate lyase
36	 29.39	-2	53048..53959	+	303	94991533	-	MGAS2096_Spy0036	-	transcriptional regulator
37	 39.40	0	54113..55183	+	356	94991534	ruvB	MGAS2096_Spy0037	-	Holliday junction DNA helicase B
38	 34.93	0	55321..55758	+	145	94991535	-	MGAS2096_Spy0038	-	protein tyrosine phosphatase
39	 35.32	0	55782..56183	+	133	94991536	-	MGAS2096_Spy0039	-	hypothetical protein
40	 36.37	0	56180..57955	+	591	94991537	-	MGAS2096_Spy0040	-	acyltransferase
41	 40.22	0	58265..60907	+	880	94991538	-	MGAS2096_Spy0041	-	bifunctional acetaldehyde-CoA/alcohol dehydrogenase
42	 39.78	0	61102..61566	+	154	94991539	adhA	MGAS2096_Spy0042	-	alcohol dehydrogenase
43	 41.16	0	61735..62028	+	97	94991540	-	MGAS2096_Spy0043	-	alcohol dehydrogenase
44	 42.92	+1	61958..62176	+	72	94991541	-	MGAS2096_Spy0044	-	alcohol dehydrogenase
45	 41.40	0	62564..63853	+	429	94991542	-	MGAS2096_Spy0045	-	Na+ driven multidrug efflux pump
46	 39.81	0	64052..64360	+	102	94991543	rpsJ	MGAS2096_Spy0046	-	30S ribosomal protein S10
47	 41.79	0	64608..65234	+	208	94991544	rplC	MGAS2096_Spy0047	-	50S ribosomal protein L3
48	 46.06	+1	65258..65587	+	109	94991545	-	MGAS2096_Spy0048	-	50S ribosomal protein L1E (L4P)
49	 38.05	0	65584..65880	+	98	94991546	rplD	MGAS2096_Spy0049	-	50S ribosomal protein L1E (L4P)
50	 37.71	0	65880..66176	+	98	94991547	rplW	MGAS2096_Spy0050	-	50S ribosomal protein L23
51	 43.53	+1	66194..67027	+	277	94991548	rplB	MGAS2096_Spy0051	-	50S ribosomal protein L2
52	 40.50	0	67167..67445	+	92	162139140	rpsS	MGAS2096_Spy0052	-	30S ribosomal protein S19
53	 39.71	0	67461..67805	+	114	94991550	rplV	MGAS2096_Spy0053	-	50S ribosomal protein L22
54	 41.59	0	67818..68471	+	217	94991551	rpsC	MGAS2096_Spy0054	-	30S ribosomal protein S3
55	 43.24	+1	68475..68888	+	137	94991552	rplP	MGAS2096_Spy0055	-	50S ribosomal protein L16
56	 35.27	0	68898..69104	+	68	94991553	rpmC	MGAS2096_Spy0056	-	50S ribosomal protein L29
57	 38.31	0	69130..69390	+	86	94991554	rpsQ	MGAS2096_Spy0057	-	30S ribosomal protein S17
58	 44.44	+1	69415..69783	+	122	94991555	rplN	MGAS2096_Spy0058	-	50S ribosomal protein L14
59	 36.60	0	69865..70170	+	101	94991556	rplX	MGAS2096_Spy0059	-	50S ribosomal protein L24
60	 40.70	0	70194..70736	+	180	94991557	rplE	MGAS2096_Spy0060	-	50S ribosomal protein L5
61	 36.84	0	71087..71485	+	132	94991558	rpsH	MGAS2096_Spy0061	-	30S ribosomal protein S8
62	 39.11	0	71688..72224	+	178	94991559	rplF	MGAS2096_Spy0062	-	50S ribosomal protein L6
63	 45.36	+1	72320..72685	+	121	94991560	rplR	MGAS2096_Spy0063	-	50S ribosomal protein L18
64	 42.63	0	72704..73198	+	164	94991561	rpsE	MGAS2096_Spy0064	-	30S ribosomal protein S5
65	 37.16	0	73213..73395	+	60	94991562	rpmD	MGAS2096_Spy0065	-	50S ribosomal protein L30
66	 39.68	0	73610..74050	+	146	94991563	rplO	MGAS2096_Spy0066	-	50S ribosomal protein L15
67	 36.40	0	74067..75371	+	434	162139139	secY	MGAS2096_Spy0067	-	preprotein translocase subunit SecY
68	 39.44	0	75521..76159	+	212	94991565	adk	MGAS2096_Spy0068	-	adenylate kinase
69	 38.10	0	76223..76495	+	90	94991566	infA	MGAS2096_Spy0069	-	translation initiation factor IF-1
70	 37.61	0	76521..76637	+	38	94991567	rpmJ	MGAS2096_Spy0070	-	50S ribosomal protein L36
71	 39.34	0	76655..77020	+	121	94991568	rpsM	MGAS2096_Spy0071	-	30S ribosomal protein S13
72	 44.01	+1	77038..77421	+	127	94991569	rpsK	MGAS2096_Spy0072	-	30S ribosomal protein S11
73	 37.91	0	77467..78405	+	312	94991570	rpoA	MGAS2096_Spy0073	-	DNA-directed RNA polymerase subunit alpha
74	 40.57	0	78420..78806	+	128	94991571	rplQ	MGAS2096_Spy0074	-	50S ribosomal protein L17
75	 35.56	0	79402..79536	-	44	94991572	-	MGAS2096_Spy0075	-	hypothetical protein
76	 42.47	0	86048..86233	+	61	94991573	-	MGAS2096_Spy0076	-	hypothetical protein
77	 36.19	0	86737..86841	+	34	94991574	-	MGAS2096_Spy0077	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
78	 42.39	0	86872..87180	+	102	94991575	-	MGAS2096_Spy0078	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
79	 38.60	0	87220..87447	+	75	94991576	-	MGAS2096_Spy0079	-	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
80	 34.46	-1	87557..88000	+	147	94991577	adcR	MGAS2096_Spy0080	-	MarR family transcriptional regulator
81	 41.25	0	88004..88723	+	239	94991578	adcC	MGAS2096_Spy0081	-	high-affinity zinc uptake system ATP-binding protein znuC
82	 38.71	0	88677..89531	+	284	94991579	adcB	MGAS2096_Spy0082	-	high-affinity zinc uptake system membrane protein znuB
83	 40.62	0	89571..89954	-	127	94991580	-	MGAS2096_Spy0083	-	bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)
84	 41.93	0	90006..91262	-	418	94991581	tyrS	MGAS2096_Spy0084	-	tyrosyl-tRNA synthetase
85	 40.34	0	91354..93666	+	770	94991582	pbp1b	MGAS2096_Spy0085	-	multimodular transpeptidase-transglycosylase PBP 1B
86	 43.12	+1	93930..97496	+	1188	94991583	rpoB	MGAS2096_Spy0086	-	DNA-directed RNA polymerase subunit beta
87	 44.09	+1	97587..101210	+	1207	94991584	rpoC	MGAS2096_Spy0087	-	DNA-directed RNA polymerase subunit beta'
88	 34.70	0	101362..101727	+	121	94991585	-	MGAS2096_Spy0088	-	putative DNA binding protein
89	 37.38	0	101820..102758	+	312	94991586	comYA	MGAS2096_Spy0089	-	ComG operon protein 1
90	 34.89	0	102637..103728	+	363	94991587	comYB	MGAS2096_Spy0090	-	ComG operon protein 2
91	 33.64	-1	103730..104056	+	108	94991588	comYC	MGAS2096_Spy0091	-	ComG operon protein 3
92	 34.27	-1	104031..104459	+	142	94991589	-	MGAS2096_Spy0092	-	ComG operon protein 4
93	 37.54	0	104416..104700	+	94	94991590	-	MGAS2096_Spy0093	-	hypothetical protein
94	 35.63	0	104693..105127	+	144	94991591	comYD	MGAS2096_Spy0094	-	ComG operon protein 6
95	 35.78	0	105111..105437	+	108	94991592	-	MGAS2096_Spy0095	-	ComG operon protein 6
96	 37.94	0	105490..106488	+	332	94991593	-	MGAS2096_Spy0096	-	adenine-specific methyltransferase
97	 38.68	0	106547..107743	+	398	94991594	ackA	MGAS2096_Spy0097	-	acetate kinase
98	 35.92	0	107930..108238	+	102	94991595	-	MGAS2096_Spy0098	-	hypothetical protein
99	 43.58	+1	108321..109091	-	256	94991596	proC	MGAS2096_Spy0099	-	pyrroline-5-carboxylate reductase
100	 45.88	+1	109139..110206	-	355	94991597	pepA	MGAS2096_Spy0100	-	glutamyl aminopeptidase
38.64	MEAN

4.01	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.