version 1.0
Aster yellows witches'-broom phytoplasma AYWB, complete genome - 1..706569 671 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 21.72 -1 1..1515 + 504 85057281 dnaA AYWB_001 - chromosomal replication initiation protein 2 20.67 -1 1709..2845 + 378 85057282 dnaN AYWB_002 - DNA polymerase III, beta subunit 3 23.61 0 3331..3618 + 95 85057283 rpsF AYWB_003 - 30S ribosomal protein S6 4 25.00 0 3633..3812 + 59 85057284 - AYWB_004 - hypothetical protein 5 27.50 0 4082..4321 + 79 85057285 rpsR AYWB_005 - 30S ribosomal protein S18 6 28.63 0 4415..6964 + 849 85057286 - AYWB_006 - exopolyphosphatase-related protein 7 28.50 0 6961..8304 + 447 85057287 dnaB AYWB_007 - replicative DNA helicase 8 31.53 0 8371..9426 + 351 85057288 prfA AYWB_008 - peptide chain release factor 1 9 29.27 0 9511..10101 + 196 85057289 sua5 AYWB_009 - translation factor SUA5 protein 10 21.09 -1 10110..11081 - 323 85057290 holA AYWB_010 - DNA polymerase III, delta subunit 11 29.61 0 11337..11927 + 196 85057291 - AYWB_011 - GTPase EngB 12 29.04 0 12105..14735 + 876 85057292 valS AYWB_012 - valyl-tRNA synthetase 13 29.03 0 14882..15439 + 185 85057293 - AYWB_013 - hypothetical protein 14 27.47 0 15472..17313 + 613 85057294 cbiO AYWB_014 - ABC-type cobalt transport system, ATP-binding protein 15 26.95 0 17303..18148 + 281 85057295 cbiQ AYWB_015 - ABC-type cobalt transport system, permease component CbiQ 16 24.42 0 18204..21278 - 1024 85057296 - AYWB_016 - hypothetical protein 17 22.46 -1 21643..22065 + 140 85057297 ibpA AYWB_017 - molecular chaperone 18 32.39 0 22660..25422 - 920 85057298 mgtA AYWB_018 - cation transport ATPase 19 26.99 0 26212..27330 + 372 85057299 - AYWB_019 - hypothetical protein 20 21.72 -1 28165..28362 + 65 85057300 - AYWB_020 - hypothetical protein 21 19.87 -1 28378..28533 + 51 85057301 - AYWB_021 - hypothetical protein 22 15.87 -2 28892..29269 + 125 85057302 - AYWB_022 - hypothetical protein 23 23.50 0 30600..30833 + 77 85057303 - AYWB_023 - hypothetical protein 24 24.10 0 30736..31125 + 129 85057304 - AYWB_024 - hypothetical protein 25 35.54 +1 31581..34118 + 845 85057305 nrdA AYWB_025 - ribonucleoside-diphosphate reductase alpha chain 26 30.96 0 34482..35534 + 350 85057306 nrdF AYWB_026 - ribonucleotide-diphosphate reductase subunit beta 27 23.74 0 37720..38157 + 145 85057307 mscL AYWB_027 - large-conductance mechanosensitive channel 28 26.78 0 38354..40078 + 574 85057308 evbG AYWB_028 - multidrug resistance ABC transporter ATP-binding and permease protein 29 26.18 0 40024..41868 + 614 85057309 evbH AYWB_029 - multidrug resistance ABC transporter ATP-binding and permease protein 30 27.54 0 42859..43134 - 91 85057310 - AYWB_030 - hypothetical protein 31 22.33 -1 43086..43403 - 105 85057311 - AYWB_031 - hypothetical protein 32 24.26 0 46277..46684 + 135 85057312 - AYWB_032 - hypothetical protein 33 24.58 0 46715..47068 + 117 85057313 - AYWB_033 - hypothetical protein 34 18.58 -1 47134..47316 + 60 85057314 - AYWB_034 - hypothetical protein 35 29.17 0 47874..48041 + 55 85057315 - AYWB_035 - hypothetical protein 36 17.46 -2 48031..48408 + 125 85057316 - AYWB_036 - hypothetical protein 37 18.59 -1 49061..49555 + 164 85057317 - AYWB_037 - hypothetical protein 38 21.57 -1 49641..49844 + 67 85057318 - AYWB_038 - hypothetical protein 39 23.97 0 49765..50031 + 88 85057319 - AYWB_039 - hypothetical protein 40 21.67 -1 50105..50464 + 119 85057320 - AYWB_040 - hypothetical protein 41 18.50 -1 50394..50912 + 172 85057321 - AYWB_041 - hypothetical protein 42 20.89 -1 51203..51829 - 208 85057322 - AYWB_042 - hypothetical protein 43 25.49 0 52274..52477 - 67 85057323 - AYWB_043 - hypothetical protein 44 24.48 0 52659..52850 - 63 85057324 - AYWB_044 - hypothetical protein 45 26.23 0 52903..53085 - 60 85057325 - AYWB_045 - hypothetical protein 46 26.42 0 53619..53864 + 81 85057326 - AYWB_046 - hypothetical protein 47 25.48 0 53890..54360 + 156 85057327 - AYWB_047 - hypothetical protein 48 28.28 0 54792..55088 + 98 85057328 - AYWB_048 - hypothetical protein 49 30.84 0 55376..55696 + 106 85057329 - AYWB_049 - hypothetical protein 50 22.51 -1 56593..57063 + 156 85057330 - AYWB_050 - hypothetical protein 51 31.54 0 58057..59229 + 390 85057331 sfcA AYWB_051 - NAD-dependent malic enzyme 52 27.60 0 59226..60761 + 511 85057332 citS AYWB_052 - malate-sodium symport 53 27.78 0 61363..62010 + 215 85057333 pgsA AYWB_053 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase 54 28.89 0 62896..64539 - 547 85057334 srmB AYWB_054 - superfamily II DNA/RNA helicase 55 22.27 -1 65103..65735 - 210 85057335 - AYWB_055 - hypothetical protein 56 21.05 -1 66913..67083 + 56 85057336 - AYWB_056 - hypothetical protein 57 23.53 0 67355..67507 + 50 85057337 - AYWB_057 - hypothetical protein 58 22.40 -1 68141..68323 - 60 85057338 - AYWB_058 - hypothetical protein 59 27.54 0 68483..69517 + 344 85057339 hrcA AYWB_059 - heat-inducible transcription repressor 60 25.62 0 69688..70413 + 241 85057340 grpE AYWB_060 - molecular chaperone GrpE protein 61 34.25 +1 70379..72226 + 615 85057341 dnaK AYWB_061 - molecular chaperone DnaK 62 31.74 0 72363..73430 + 355 85057342 dnaJ AYWB_062 - molecular chaperone DnaJ 63 20.92 -1 73810..73962 + 50 85057343 - AYWB_063 - hypothetical protein 64 30.16 0 74815..75885 + 356 85057344 ftsY AYWB_064 - signal recognition particle, docking protein FtsY 65 28.96 0 75981..77351 + 456 85057345 ffh AYWB_065 - signal recognition particle, subunit FFH/SRP54 66 26.26 0 77554..80097 + 847 85057346 polA AYWB_066 - DNA polymerase I 67 28.04 0 80198..81028 + 276 85057347 nei AYWB_067 - formamidopyrimidine-DNA glycosylase 68 28.14 0 81084..82277 + 397 85057348 dnaB AYWB_068 - replication initiation and membrane attachment protein 69 27.47 0 82362..83180 + 272 85057349 dnaC AYWB_069 - DNA replication protein DnaC 70 37.78 +2 83961..84185 - 74 85057350 cspC AYWB_070 - cold shock protein 71 32.98 +1 84902..85183 + 93 85057351 - AYWB_071 - fragment of ATP-dependent Zn protease 72 22.82 0 85274..85663 + 129 85057352 - AYWB_072 - hypothetical protein 73 22.82 0 85667..86227 + 186 85057353 - AYWB_073 - hypothetical protein 74 27.01 0 87154..87786 + 210 85057354 tmk AYWB_074 - thymidylate kinase 75 28.32 0 87953..88351 + 132 85057355 - AYWB_075 - hypothetical protein 76 27.32 0 88585..88767 + 60 85057356 - AYWB_076 - hypothetical protein 77 28.35 0 89099..89359 + 86 85057357 - AYWB_077 - hypothetical protein 78 28.00 0 89573..89872 + 99 85057358 - AYWB_078 - hypothetical protein 79 26.14 0 90083..90235 + 50 85057359 - AYWB_079 - hypothetical protein 80 26.06 0 90460..90624 + 54 85057360 - AYWB_080 - hypothetical protein 81 20.83 -1 90834..91145 + 103 85057361 - AYWB_081 - hypothetical protein 82 21.44 -1 91341..91811 + 156 85057362 - AYWB_082 - hypothetical protein 83 18.67 -1 91774..92448 + 224 85057363 - AYWB_083 - hypothetical protein 84 23.07 0 92481..93659 + 392 85057364 - AYWB_084 - hypothetical protein 85 20.05 -1 93819..96935 + 1038 85057365 uvrD AYWB_085 - UvrD helicase 86 25.38 0 97131..97658 + 175 85057366 - AYWB_086 - hypothetical protein 87 26.94 0 97633..97992 + 119 85057367 - AYWB_087 - hypothetical protein 88 20.42 -1 99727..99966 + 79 85057368 - AYWB_088 - hypothetical protein 89 24.86 0 100283..100459 + 58 85057369 - AYWB_089 - hypothetical protein 90 28.21 0 101041..102756 - 571 85057370 - AYWB_090 - kinase related to dihydroxyacetone kinase 91 24.30 0 103777..104097 + 106 85057371 - AYWB_091 - hypothetical protein 92 26.17 0 104499..105713 - 404 85057372 potD AYWB_092 - spermidine/putrescine-binding protein 93 30.19 0 105732..106622 - 296 85057373 potC AYWB_093 - ABC-type spermidine/putrescine transport system, permease protein PotC 94 29.56 0 106612..107460 - 282 85057374 potB AYWB_094 - ABC-type spermidine/putrescine transport system, permease protein PotB 95 28.71 0 107454..108707 - 417 85057375 potA AYWB_095 - ABC-type spermidine/putrescine transport, ATP-binding protein PotA 96 31.79 0 109287..111041 + 584 85057376 hflB AYWB_096 - ATP-dependent zinc metallopeptidase FtsH 97 22.62 -1 113107..113274 + 55 85057377 - AYWB_097 - hypothetical protein 98 30.96 0 114437..116161 + 574 85057378 - AYWB_098 - Zn-dependent hydrolase 99 28.82 0 116435..117298 + 287 85057379 degV AYWB_099 - DegV family protein 100 28.57 0 118135..118953 - 272 85057380 cof AYWB_100 - HAD family hydrolase 27.55 MEAN 4.88 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.