IslandPath Analysis: Erythrobacter litoralis HTCC2594



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 63.05   STD DEV: 3.61
Erythrobacter litoralis HTCC2594, complete genome - 1..3052398
3011 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 63.22	0	6086..7825	-	579	85372829	-	ELI_00010	-	hypothetical protein
2	 57.89	-1	8104..9186	+	360	85372830	-	ELI_00015	-	regulatory protein, LuxR
3	 62.45	0	9236..10564	-	442	85372831	-	ELI_00020	-	hypothetical protein
4	 63.56	0	10683..11807	+	374	85372832	-	ELI_00025	-	putative dolichol-phosphate mannosyltransferase
5	 67.33	+1	11783..13297	+	504	85372833	-	ELI_00030	-	hypothetical protein
6	 65.64	0	13421..15073	+	550	85372834	-	ELI_00035	-	acyl-CoA dehydrogenase, putative
7	 61.68	0	15055..17964	-	969	85372835	-	ELI_00040	-	hypothetical protein
8	 64.78	0	18224..19492	-	422	85372836	-	ELI_00045	-	acetyl-CoA acetyltransferase
9	 63.74	0	19608..20393	+	261	85372837	-	ELI_00050	-	enoyl CoA dehydratase/isomerase
10	 65.80	0	20396..21544	+	382	85372838	-	ELI_00055	-	hypothetical protein
11	 62.29	0	21572..22714	+	380	85372839	-	ELI_00060	-	acyl-CoA dehydrogenase
12	 61.81	0	23327..23758	+	143	85372840	rplK	ELI_00065	-	50S ribosomal protein L11
13	 61.76	0	23763..24455	+	230	85372841	rplA	ELI_00070	-	50S ribosomal protein L1
14	 59.32	-1	24695..24871	+	58	85372842	-	ELI_00075	-	hypothetical protein
15	 61.66	0	25033..26010	-	325	85372843	-	ELI_00080	-	hypothetical protein
16	 62.76	0	26123..26890	-	255	85372844	-	ELI_00085	-	nucleotide-utilizing enzyme
17	 60.04	0	26923..28431	-	502	85372845	-	ELI_00090	-	monooxygenase, flavin-binding family protein
18	 66.02	0	28552..30564	+	670	85372846	-	ELI_00095	-	TonB-dependent receptor, putative
19	 62.37	0	30617..33829	+	1070	85372847	-	ELI_00100	-	bifunctional P-450:NADPH-P450 reductase
20	 60.12	0	33987..35177	+	396	85372848	-	ELI_00105	-	site-specfic recombinase, phage integrase family protein
21	 58.60	-1	35602..35787	-	61	85372849	-	ELI_00110	-	hypothetical protein
22	 54.55	-2	36813..37406	-	197	85372850	-	ELI_00115	-	hypothetical protein
23	 52.32	-2	37385..38116	-	243	85372851	-	ELI_00120	-	hypothetical protein
24	 65.82	0	38843..39664	+	273	85372852	-	ELI_00125	-	hypothetical protein
25	 64.12	0	39756..40934	+	392	85372853	-	ELI_00130	-	aromatic amino acid aminotransferase
26	 64.73	0	40921..41487	+	188	85372854	-	ELI_00135	-	acetyltransferase, putative
27	 55.76	-2	41549..41713	+	54	85372855	-	ELI_00140	-	hypothetical protein
28	 63.77	0	41729..42349	-	206	85372856	-	ELI_00145	-	riboflavin synthase subunit alpha
29	 67.28	+1	42359..43336	-	325	85372857	-	ELI_00150	-	riboflavin-specific deaminase/reductase
30	 64.44	0	43336..43785	-	149	85372858	-	ELI_00155	-	hypothetical protein
31	 63.07	0	43844..44566	-	240	85372859	-	ELI_00160	-	hypothetical protein
32	 64.64	0	44563..45006	-	147	85372860	-	ELI_00165	-	hypothetical protein
33	 64.31	0	44994..45587	-	197	85372861	-	ELI_00170	-	electron transport protein
34	 61.99	0	45760..46293	+	177	85372862	-	ELI_00175	-	hypothetical protein
35	 60.63	0	46298..46960	+	220	85372863	-	ELI_00180	-	hypothetical protein
36	 66.67	0	47020..47259	+	79	85372864	-	ELI_00185	-	Fe2+ transport system protein A
37	 63.13	0	47273..49111	+	612	85372865	-	ELI_00190	-	Fe2+ transport system protein B
38	 64.22	0	49127..49657	+	176	85372866	-	ELI_00195	-	single-strand binding protein
39	 62.10	0	49684..50208	-	174	85372867	-	ELI_00200	-	hypothetical protein
40	 64.93	0	50205..50723	-	172	85372868	-	ELI_00205	-	hypothetical protein
41	 66.20	0	50980..51408	+	142	85372869	-	ELI_00210	-	tmRNA-binding small protein A
42	 60.75	0	51465..52022	+	185	85372870	-	ELI_00215	-	ATP-dependent protease peptidase subunit
43	 60.83	0	52117..53418	+	433	85372871	hslU	ELI_00220	-	ATP-dependent protease ATP-binding subunit
44	 65.45	0	53415..53825	+	136	85372872	-	ELI_00225	-	hypothetical protein
45	 63.86	0	53822..55423	-	533	85372873	-	ELI_00230	-	putative sulfate permease protein
46	 64.73	0	55558..58404	+	948	85372874	-	ELI_00235	-	peptidase, M16 family protein
47	 62.82	0	58405..60222	-	605	85372875	-	ELI_00240	-	ABC-type transport system ATPase component
48	 63.48	0	60296..61267	-	323	85372876	-	ELI_00245	-	hypothetical protein
49	 61.20	0	61370..62833	-	487	85372877	-	ELI_00250	-	capsular polysaccharide transporter
50	 63.67	0	69186..71222	+	678	85372878	-	ELI_00255	-	serine protease, trypsin family protein
51	 64.41	0	71238..72476	+	412	85372879	-	ELI_00260	-	putative sphingosine-1-phosphate lyase
52	 63.49	0	72551..72802	-	83	85372880	-	ELI_00265	-	hypothetical protein
53	 63.56	0	72825..74789	-	654	85372881	-	ELI_00270	-	putative adenylate cyclase protein
54	 64.19	0	74986..76926	+	646	85372882	-	ELI_00275	-	hypothetical protein
55	 60.20	0	76881..77390	+	169	85372883	-	ELI_00280	-	hypothetical protein
56	 65.52	0	77403..78968	-	521	85372884	-	ELI_00285	-	acetyl-CoA acetyltransferase
57	 62.65	0	79066..80559	+	497	85372885	-	ELI_00290	-	hypothetical protein
58	 61.72	0	80659..81870	+	403	85372886	-	ELI_00295	-	acyl-CoA dehydrogenase family protein
59	 63.38	0	81900..82964	+	354	85372887	-	ELI_00300	-	acyl-CoA dehydrogenase family protein
60	 64.76	0	83125..84384	+	419	85372888	-	ELI_00305	-	hypothetical protein
61	 63.90	0	84372..86108	-	578	85372889	-	ELI_00310	-	long-chain-fatty-acid--CoA ligase
62	 62.33	0	86199..87443	+	414	85372890	-	ELI_00315	-	Beta-lactamase
63	 62.74	0	87456..89492	+	678	85372891	-	ELI_00320	-	fatty oxidation complex, alpha subunit
64	 62.67	0	89732..91057	+	441	85372892	-	ELI_00325	-	TonB-dependent receptor
65	 61.42	0	91273..92739	+	488	85372893	-	ELI_00330	-	TonB-dependent receptor
66	 64.29	0	92814..94118	+	434	85372894	-	ELI_00335	-	major facilitator superfamily transporter
67	 60.77	0	94126..94752	-	208	85372895	-	ELI_00340	-	glutathione S-transferase
68	 66.16	0	94849..95835	-	328	85372896	-	ELI_00345	-	radical SAM domain-containing protein
69	 61.17	0	95835..97253	-	472	85372897	-	ELI_00350	-	mercuric reductase, putative
70	 62.41	0	97352..98407	+	351	85372898	-	ELI_00355	-	hypothetical protein
71	 64.26	0	98407..99444	+	345	85372899	-	ELI_00360	-	hypothetical protein
72	 61.43	0	99426..100151	-	241	85372900	-	ELI_00365	-	hypothetical protein
73	 65.63	0	100148..100726	-	192	85372901	-	ELI_00370	-	hypothetical protein
74	 63.78	0	100723..102075	-	450	85372902	-	ELI_00375	-	Na(+) driven multidrug efflux pump
75	 66.67	0	102179..102730	+	183	85372903	-	ELI_00380	-	isoquinoline 1-oxidoreductase (alpha subunit)oxidoreductase protein
76	 61.46	0	102762..104855	-	697	85372904	-	ELI_00385	-	putative TonB-dependent receptor
77	 59.17	-1	104968..105354	+	128	85372905	-	ELI_00390	-	arsenate reductase
78	 66.52	0	105351..106736	-	461	85372906	-	ELI_00395	-	multidrug resistance protein, putative
79	 62.54	0	106833..107462	+	209	85372907	-	ELI_00400	-	phospholipid N-methyltransferase
80	 61.82	0	107466..108290	-	274	85372908	-	ELI_00405	-	hypothetical protein
81	 64.85	0	108361..109020	+	219	85372909	-	ELI_00410	-	lipoate-protein ligase B
82	 68.24	+1	109017..109334	+	105	85372910	-	ELI_00415	-	hypothetical protein
83	 65.27	0	109331..110191	-	286	85372911	-	ELI_00420	-	citrate lyase beta chain
84	 62.97	0	110209..111318	-	369	85372912	-	ELI_00425	-	putative oxidoreductase
85	 64.99	0	111377..112330	+	317	85372913	-	ELI_00430	-	hypothetical protein
86	 61.84	0	112297..113622	-	441	85372914	-	ELI_00435	-	hypothetical protein
87	 60.25	0	113884..114912	-	342	85372915	-	ELI_00440	-	quinolinate synthetase
88	 65.12	0	115028..116647	+	539	85372916	-	ELI_00445	-	putative long-chain fatty-acid-CoA ligase
89	 65.89	0	116654..117421	-	255	85372917	-	ELI_00450	-	hypothetical protein
90	 63.37	0	117463..119436	-	657	85372918	-	ELI_00455	-	TPR domain-containing protein
91	 63.66	0	119519..122176	-	885	85372919	-	ELI_00460	-	TonB-dependent receptor
92	 63.39	0	122582..124288	-	568	85372920	-	ELI_00465	-	transporter, BCCT family protein
93	 63.01	0	124446..125129	-	227	85372921	-	ELI_00470	-	hypothetical protein
94	 65.64	0	125114..125986	-	290	85372922	-	ELI_00475	-	metallo-beta-lactamase family protein
95	 67.68	+1	126049..127521	+	490	85372923	-	ELI_00480	-	glycerol kinase
96	 64.12	0	127518..127988	-	156	85372924	-	ELI_00485	-	AraC family transcriptional regulator
97	 59.60	0	128100..128297	-	65	85372925	-	ELI_00490	-	hypothetical protein
98	 58.97	-1	128481..128636	+	51	85372926	-	ELI_00495	-	hypothetical protein
99	 64.59	0	128718..130985	+	755	85372927	-	ELI_00500	-	phosphoenolpyruvate-protein phosphotransferase
100	 66.06	0	131109..131939	+	276	85372928	-	ELI_00505	-	hypothetical protein
63.05	MEAN

3.61	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.