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Bordetella avium 197N, complete genome - 1..3732255 3381 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 55.85 -1 1..1914 + 637 187476515 gidA BAV0001 - glucose inhibited division protein A 2 58.37 0 1911..2585 + 224 187476516 gidB BAV0002 - glucose inhibited division protein B 3 56.14 -1 2582..3379 + 265 187476517 parA BAV0003 - chromosome partitioning protein 4 60.04 0 3448..4353 + 301 187476518 parB BAV0004 - chromosome partitioning protein 5 60.52 0 4346..5353 + 335 187476519 ansB BAV0005 - L-asparaginase II 6 61.46 0 5849..7039 + 396 187476520 tuf BAV0006 - elongation factor Tu 7 55.64 -1 7330..7710 + 126 187476521 prlG BAV0007 - preprotein translocase SecE subunit 8 53.37 -2 7719..8252 + 177 187476522 nusG BAV0008 - transcription antitermination protein 9 60.65 0 8309..8740 + 143 187476523 relC BAV0009 - 50S ribosomal protein L11 10 61.78 0 8743..9438 + 231 187476524 rplA BAV0010 - 50S ribosomal protein L1 11 60.57 0 9682..10206 + 174 187476525 rplJ BAV0011 - 50S ribosomal protein L10 12 61.15 0 10291..10671 + 126 187476526 rplL BAV0012 - 50S ribosomal protein L7/L12 13 59.25 0 10808..14944 + 1378 187476527 groN BAV0013 - DNA-directed RNA polymerase beta chain 14 59.95 0 14944..19185 + 1413 187476528 rpoC BAV0014 - DNA-directed RNA polymerase beta' chain 15 60.27 0 20028..21122 + 364 187476529 - BAV0015 - membrane protein 16 60.98 0 21129..23432 - 767 187476530 - BAV0016 - two-component sensor protein 17 62.68 0 23444..24547 - 367 187476531 - BAV0017 - peptidoglycan binding protein 18 55.97 -1 24586..25305 - 239 187476532 - BAV0018 - two-component response regulator 19 62.04 0 25555..26268 + 237 187476533 - BAV0019 - Two-component response regulator 20 59.26 0 26703..27080 + 125 187476534 rpsL BAV0020 - 30S ribosomal protein S12 21 60.30 0 27249..27719 + 156 187476535 rpsG BAV0021 - 30S ribosomal protein S7 22 58.96 0 27738..29840 + 700 187476536 far1 BAV0022 - elongation factor G 23 61.46 0 29917..31107 + 396 187476537 tuf BAV0023 - elongation factor Tu 24 58.33 0 31171..31482 + 103 187476538 nusE BAV0024 - 30S ribosomal protein S10 25 63.11 0 31950..32651 + 233 187476539 rplC BAV0025 - 50S ribosomal protein L3 26 60.03 0 32656..33273 + 205 187476540 rplD BAV0026 - 50S ribosomal protein L4 27 56.90 -1 33270..33566 + 98 187476541 rplW BAV0027 - 50S ribosomal protein L23 28 61.71 0 33567..34394 + 275 187476542 rplB BAV0028 - 50S ribosomal protein L2 29 56.52 -1 34407..34682 + 91 187476543 rpsS BAV0029 - 30S ribosomal protein S19 30 56.36 -1 34686..35015 + 109 187476544 rplV BAV0030 - 50S ribosomal protein L22 31 62.01 0 35025..35819 + 264 187476545 rpsC BAV0031 - 30S ribosomal protein S3 32 60.91 0 35822..36238 + 138 187476546 rplP BAV0032 - 50S ribosomal protein L16 33 58.85 0 36250..36441 + 63 187476547 rpmC BAV0033 - 50S ribosomal protein L29 34 58.51 0 36444..36725 + 93 187476548 rpsQ BAV0034 - 30S ribosomal protein S17 35 51.28 -2 37375..37959 + 194 187476549 - BAV0035 - dioxygenase 36 53.47 -2 38013..38861 + 282 187476550 - BAV0036 - dioxygenase 37 50.40 -2 38942..39931 + 329 187476551 - BAV0037 - exported protein 38 50.54 -2 39939..40496 + 185 187476552 - BAV0038 - reductase 39 53.43 -2 40518..41507 + 329 187476553 - BAV0039 - exported protein 40 52.81 -2 41592..42320 + 242 187476554 - BAV0040 - short-chain dehydrogenase/reductase 41 53.26 -2 42353..43150 + 265 187476555 - BAV0041 - IclR-family transcriptional regulator 42 61.76 0 43486..44913 - 475 187476556 - BAV0042 - aldehyde dehydrogenase 43 57.54 -1 45218..45973 + 251 187476557 - BAV0043 - asparaginyl beta-hydroxylase 44 59.35 0 46388..46756 + 122 187476558 rplN BAV0044 - 50S ribosomal protein L14 45 57.32 -1 46767..47087 + 106 187476559 rplX BAV0045 - 50S ribosomal protein L24 46 56.30 -1 47100..47639 + 179 187476560 rplE BAV0046 - 50S ribosomal protein L5 47 60.78 0 47649..47954 + 101 187476561 rpsN BAV0047 - 30S ribosomal protein S14 48 58.33 0 47965..48360 + 131 187476562 rpsH BAV0048 - 30S ribosomal protein S8 49 60.49 0 48371..48904 + 177 187476563 rplF BAV0049 - 50S ribosomal protein L6 50 61.75 0 48923..49288 + 121 187476564 rplR BAV0050 - 50S ribosomal protein L18 51 60.73 0 49304..49825 + 173 187476565 rpsE BAV0051 - 30S ribosomal protein S5 52 59.14 0 49829..50014 + 61 187476566 rpmD BAV0052 - 50S ribosomal protein L30 53 63.95 0 50024..50464 + 146 187476567 rplO BAV0053 - 50S ribosomal protein L15 54 57.99 -1 50479..51804 + 441 187476568 prlA BAV0054 - preprotein translocase SecY subunit 55 53.88 -2 51814..52032 + 72 187476569 infA BAV0055 - translation initiation factor IF-1 56 53.51 -2 52068..52181 + 37 187476570 rpmJ BAV0056 - 50S ribosomal protein l36 57 59.56 0 52224..52589 + 121 187476571 rpsM BAV0057 - 30S ribosomal protein S13 58 59.95 0 52605..53006 + 133 187476572 rpsK BAV0058 - 30S ribosomal protein S11 59 59.46 0 53018..53641 + 207 187476573 ramA BAV0059 - 30S ribosomal protein S4 60 59.88 0 53814..54800 + 328 187476574 rpoA BAV0060 - DNA-directed RNA polymerase alpha chain 61 59.85 0 54963..55358 + 131 187476575 rplQ BAV0061 - 50S ribosomal protein L17 62 58.62 0 55406..55840 - 144 187476576 - BAV0062 - histidine triad protein 63 56.25 -1 55931..56266 + 111 187476577 cutA BAV0063 - periplasmic divalent cation tolerance protein 64 63.60 0 56278..58167 + 629 187476578 - BAV0064 - thiol:disulfide interchange protein 65 63.23 0 58249..59265 - 338 187476579 hemB BAV0065 - delta-aminolevulinic acid dehydratase 66 62.18 0 59262..59885 - 207 187476580 engB BAV0066 - GTP-binding protein 67 61.93 0 60069..60743 + 224 187476581 - BAV0067 - cytochrome C 68 60.09 0 60826..62907 + 693 187476582 - BAV0068 - C-type cytochrome bigenesis protein 69 59.44 0 62904..64232 + 442 187476583 - BAV0069 - cytochrome c biogenesis protein 70 63.02 0 64273..65562 - 429 187476584 lysA BAV0070 - diaminopimelate decarboxylase 71 60.61 0 65785..66114 + 109 187476585 cyaY BAV0071 - hypothetical protein 72 61.68 0 66125..68569 - 814 187476586 - BAV0072 - penicillin-binding protein 1A 73 58.41 0 68684..69313 + 209 187476587 aroK BAV0073 - shikimate kinase I 74 61.77 0 69310..70392 + 360 187476588 aroB BAV0074 - 3-dehydroquinate synthase 75 60.14 0 70412..71545 + 377 187476589 - BAV0075 - deoxyguanosinetriphosphate triphosphohydrolase 76 63.04 0 71689..72762 - 357 187476590 - BAV0076 - transcriptional regulator 77 62.58 0 72890..73549 - 219 187476591 - BAV0077 - glutathione S-transferase 78 62.15 0 73573..76431 - 952 187476592 uvrA BAV0078 - excinuclease ABC subunit A 79 65.90 +1 76612..77790 + 392 187476593 - BAV0079 - MFS family transporter 80 62.87 0 78045..78545 + 166 187476594 ssb BAV0080 - single-strand binding protein 81 58.16 0 78771..80240 + 489 187476595 - BAV0081 - O-antigen translocase 82 58.62 0 80356..81672 + 438 187476596 - BAV0082 - lipopolysaccharide biosynthesis protein 83 56.85 -1 81669..82697 + 342 187476597 - BAV0083 - lipopolysaccharide biosynthesis protein 84 58.18 0 82707..84026 + 439 187476598 - BAV0084 - lipopolysaccharide biosynthesis protein 85 63.24 0 84023..84634 + 203 187476600 - BAV0085 - lipopolysaccharide biosynthesis protein 86 51.31 -2 84883..85833 + 316 187476601 - BAV0086 - glycosyl transferase 87 52.67 -2 85913..87856 + 647 187476602 - BAV0087 - lipopolysaccharide biosynthesis protein 88 55.34 -1 87862..88629 + 255 187476603 - BAV0088 - lipopolysaccharide biosynthesis protein 89 54.27 -2 88632..89672 + 346 187476604 - BAV0089 - lipid A biosynthesis protein 90 58.79 0 89625..91553 - 642 187476605 bplL BAV0090 - sugar epimerase/dehydratase 91 59.60 0 91619..92977 - 452 187476606 bplJ BAV0091 - membrane protein 92 60.46 0 92974..94182 - 402 187476607 bplH BAV0092 - glycosyl transferase 93 59.50 0 94272..94871 - 199 187476608 bplG BAV0093 - sugar transferase 94 62.17 0 94868..96046 - 392 187476609 bplF BAV0094 - lipopolysaccharide biosynthesis protein 95 60.32 0 96191..97387 - 398 187476610 bplE BAV0095 - glycosyl transferase 96 61.31 0 97405..98505 - 366 187476611 bplC BAV0096 - lipopolysaccharide biosynthesis protein 97 60.53 0 98516..99085 - 189 187476612 bplB BAV0097 - acetyltransferase 98 61.03 0 99093..100139 - 348 187476613 bplA BAV0098 - oxidoreductase 99 61.46 0 100501..101172 + 223 187476614 - BAV0099 - two-component response regulator 100 64.53 0 101195..103633 + 812 187476615 - BAV0100 - bifunctional protein: two-component system sensor protein and solute-binding protein 61.72 MEAN 3.65 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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