IslandPath Analysis: Mycobacterium ulcerans Agy99



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 65.34   STD DEV: 3.10
Mycobacterium ulcerans Agy99, complete genome - 1..5631606
4160 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 61.25	-1	1..1533	+	510	118615920	dnaA	MUL_0001	-	chromosomal replication initiation protein
2	 63.52	0	2072..3280	+	402	118615921	dnaN	MUL_0002	-	DNA polymerase III subunit beta
3	 63.99	0	3301..4458	+	385	118615922	recF	MUL_0003	-	recombination protein F
4	 68.62	+1	4455..5018	+	187	118615923	-	MUL_0004	-	hypothetical protein
5	 61.71	-1	5228..7306	+	692	118615924	gyrB	MUL_0005	-	DNA gyrase subunit B
6	 64.37	0	7346..9865	+	839	118615925	gyrA	MUL_0006	-	DNA gyrase subunit A
7	 69.47	+1	9949..10947	+	332	118615926	-	MUL_0007	-	hypothetical protein
8	 69.53	+1	11361..12197	+	278	118615927	-	MUL_0010	-	hypothetical protein
9	 64.70	0	12225..12986	-	253	118615928	-	MUL_0011	-	transcriptional regulator
10	 70.86	+1	13097..13501	-	134	118615929	-	MUL_0012	-	hypothetical protein
11	 64.12	0	13691..14239	+	182	118615930	ppiA	MUL_0013	-	peptidyl-prolyl cis-trans isomerase A, PpiA
12	 65.73	0	14250..14675	-	141	118615931	-	MUL_0014	-	hypothetical protein
13	 58.16	-2	14831..15112	-	93	118615932	-	MUL_0015	-	putative septation inhibitor protein
14	 67.61	0	15241..15984	+	247	118615933	-	MUL_0016	-	hypothetical protein
15	 65.94	0	16022..16708	+	228	118615934	trpG	MUL_0017	-	para-aminobenzoate synthase component II
16	 66.19	0	16686..18566	-	626	118615935	pknB	MUL_0018	-	serine/threonine-protein kinase B PknB
17	 68.43	0	18563..19921	-	452	118615936	pknA	MUL_0019	-	serine/threonine-protein kinase a PknA
18	 67.62	0	19918..21393	-	491	118615937	pbpA	MUL_0020	-	penicillin-binding protein PbpA
19	 64.47	0	21390..22799	-	469	118615938	rodA	MUL_0021	-	cell division protein RodA
20	 67.12	0	22796..24355	-	519	118615939	pstP	MUL_0022	-	serine/threonine phosphatase PstP
21	 62.61	0	24352..24819	-	155	118615940	-	MUL_0023	-	hypothetical protein
22	 68.42	0	24953..26551	-	532	118615941	-	MUL_0024	-	hypothetical protein
23	 61.80	-1	26845..28179	+	444	118615942	-	MUL_0025	-	transposase for IS2606
24	 64.95	0	28617..29372	+	251	118615943	-	MUL_0027	-	glycosylase
25	 63.11	0	29488..30162	-	224	118615944	-	MUL_0028	-	shortchain dehydrogenase
26	 69.72	+1	30440..31192	+	250	118615945	-	MUL_0029	-	hypothetical protein
27	 66.67	0	32216..32920	-	234	118615946	-	MUL_0032	-	hypothetical protein
28	 65.58	0	33021..34220	-	399	118615947	proV_1	MUL_0033	-	osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport ATP-binding protein ABC transporter ProV_1
29	 62.96	0	34213..34860	-	215	118615948	-	MUL_0034	-	ABC transporter permease
30	 56.62	-2	35179..35586	+	135	118615949	-	MUL_0035	-	DNA-binding protein
31	 66.46	0	35688..36635	-	315	118615950	-	MUL_0036	-	hypothetical protein
32	 66.44	0	36765..38078	+	437	118615951	amt_1	MUL_0037	-	ammonium-transport integral membrane protein, Amt_1
33	 64.33	0	38088..38387	-	99	118615952	-	MUL_0038	-	hypothetical protein
34	 68.19	0	38384..39301	-	305	118615953	-	MUL_0039	-	hypothetical protein
35	 68.82	+1	39468..39884	-	138	118615954	whiB5	MUL_0040	-	transcriptional regulatory protein (Whib-like), WhiB5
36	 66.16	0	40027..40818	+	263	118615955	-	MUL_0041	-	transcriptional regulatory protein
37	 70.17	+1	40815..41642	+	275	118615956	-	MUL_0042	-	secreted protein P60-related protein
38	 66.40	0	41639..42019	+	126	118615957	-	MUL_0043	-	hypothetical protein
39	 68.25	0	42094..43359	+	421	118615958	-	MUL_0044	-	hypothetical protein
40	 64.47	0	43402..43719	+	105	118615959	-	MUL_0045	-	hypothetical protein
41	 65.19	0	43716..44120	+	134	118615960	-	MUL_0046	-	hypothetical protein
42	 67.57	0	44248..45354	+	368	118615961	-	MUL_0047	-	hypothetical protein
43	 62.93	0	45442..45762	+	106	118615962	-	MUL_0048	-	hypothetical protein
44	 62.30	0	45887..46069	+	60	118615963	-	MUL_0049	-	hypothetical protein
45	 71.19	+1	46161..46934	-	257	118615964	-	MUL_0050	-	hypothetical protein
46	 66.36	0	46937..48229	-	430	118615965	-	MUL_0051	-	integral membrane protein
47	 65.68	0	48389..48994	+	201	118615966	-	MUL_0052	-	hypothetical protein
48	 65.06	0	48981..49976	-	331	118615967	-	MUL_0053	-	hypothetical protein
49	 68.66	+1	50029..50379	-	116	118615968	-	MUL_0054	-	hypothetical protein
50	 72.49	+2	50464..51597	-	377	118615969	mtc28	MUL_0055	-	secreted proline rich protein Mtc28
51	 64.52	0	51796..54726	+	976	118615970	leuS	MUL_0056	-	leucyl-tRNA synthetase
52	 63.21	0	54756..55421	-	221	118615971	-	MUL_0057	-	short chain dehydrogenase
53	 66.67	0	55462..55965	-	167	118615972	-	MUL_0058	-	transcriptional regulatory protein
54	 63.66	0	58626..59390	-	254	118615973	-	MUL_0061	-	GntR family transcriptional regulator
55	 66.04	0	59501..60298	-	265	118615974	-	MUL_0062	-	oxidoreductase
56	 67.21	0	60330..61241	-	303	118615975	-	MUL_0063	-	hydrolase
57	 65.42	0	61287..62405	-	372	118615976	ino1	MUL_0064	-	myo-inositol-1-phosphate synthase Ino1
58	 67.77	0	62467..63009	-	180	118615977	-	MUL_0065	-	hypothetical protein
59	 66.44	0	63165..64034	-	289	118615978	-	MUL_0066	-	hypothetical protein
60	 63.91	0	64147..64581	+	144	118615979	-	MUL_0067	-	hypothetical protein
61	 65.69	0	65069..67111	+	680	118615980	ponA1	MUL_0068	-	bifunctional penicillin-binding protein 1A/1B PonA1
62	 64.23	0	67108..68748	+	546	118615981	-	MUL_0069	-	hypothetical protein
63	 65.88	0	68748..69386	+	212	118615982	-	MUL_0070	-	transcriptional regulatory protein
64	 62.20	-1	69510..69800	+	96	118615983	rpsF	MUL_0071	-	30S ribosomal protein S6
65	 68.02	0	69892..70407	+	171	118615984	ssb	MUL_0072	-	single-strand DNA-binding protein
66	 62.75	0	70453..70707	+	84	118615985	rpsR	MUL_0073	-	30S ribosomal protein S18
67	 66.23	0	70754..71212	+	152	118615986	rplI	MUL_0074	-	50S ribosomal protein L9
68	 64.50	0	71743..73125	+	460	118615987	dnaB	MUL_0075	-	replicative DNA helicase DnaB
69	 69.39	+1	73690..74349	+	219	118615988	-	MUL_0076	-	hypothetical protein
70	 67.46	0	74478..75104	-	208	118615989	-	MUL_0077	-	hydrolase
71	 65.85	0	77264..77878	-	204	118615990	-	MUL_0080	-	transcriptional regulator
72	 66.99	0	77913..78218	+	101	118615991	-	MUL_0081	-	hypothetical protein
73	 63.93	0	80415..80999	+	194	118615992	-	MUL_0084	-	hypothetical protein
74	 61.11	-1	82839..83144	+	101	118615993	-	MUL_0086	-	transcriptional regulator
75	 63.31	0	83141..83557	+	138	118615994	-	MUL_0087	-	hypothetical protein
76	 67.47	0	85879..87126	+	415	118615995	-	MUL_0089	-	hypothetical protein
77	 62.90	0	87171..88127	-	318	118615996	rfbD	MUL_0090	-	O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD
78	 66.05	0	87998..88972	-	324	118615997	-	MUL_0091	-	L-rhamnosyltransferase
79	 64.18	0	88920..89762	-	280	118615998	rfbE	MUL_0092	-	O-antigen/lipopolysaccharide transport ATP- binding protein ABC transporter RfbE
80	 64.79	0	89766..90299	-	177	118615999	-	MUL_0093	-	hypothetical protein
81	 65.45	0	90312..92285	-	657	118616000	-	MUL_0094	-	transmembrane protein
82	 68.50	+1	92416..93612	+	398	118616001	-	MUL_0095	-	aminotransferase
83	 67.47	0	93652..94644	-	330	118616002	-	MUL_0096	-	oxidoreductase
84	 65.14	0	95273..96187	+	304	118616003	-	MUL_0098	-	PPE family protein
85	 61.70	-1	96405..97451	+	348	118616004	-	MUL_0099	-	transposase for IS2404
86	 61.60	-1	98998..100044	+	348	118616005	-	MUL_0101	-	transposase for IS2404
87	 63.00	0	101494..102528	-	344	118616006	fba	MUL_0103	-	fructose-bisphosphate aldolase
88	 63.20	0	102629..103321	+	230	118616007	-	MUL_0104	-	transmembrane protein
89	 67.19	0	103310..104449	-	379	118616008	-	MUL_0105	-	glycosyl hydrolase
90	 70.54	+1	109181..109954	+	257	118616009	eutC	MUL_0109	-	ethanolamine ammonia-lyase small subunit
91	 69.57	+1	109957..111162	-	401	118616010	-	MUL_0110	-	von Willebrand factor type A domain-containing protein
92	 67.26	0	111169..111843	-	224	118616011	-	MUL_0111	-	membrane oxidoreductase
93	 64.96	0	111857..112735	-	292	118616012	-	MUL_0112	-	membrane oxidoreductase
94	 66.50	0	112736..113326	-	196	118616013	-	MUL_0113	-	hypothetical protein
95	 70.77	+1	113433..114212	-	259	118616014	-	MUL_0114	-	hypothetical protein
96	 65.16	0	114216..116606	-	796	118616015	coxL	MUL_0115	-	carbon monoxyde dehydrogenase (large chain), CoxL
97	 64.38	0	116603..117082	-	159	118616016	coxS	MUL_0116	-	carbon monoxyde dehydrogenase (small chain), CoxS
98	 67.63	0	119275..120207	+	310	118616017	-	MUL_0119	-	LysR family transcriptional regulator
99	 60.65	-1	120225..120440	+	71	118616018	secE2	MUL_0120	-	protein transport protein SecE2
100	 68.04	0	120549..121205	-	218	118616019	-	MUL_0121	-	RNA methyltransferase
65.34	MEAN

3.10	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.