IslandPathversion 1.0

IslandPath Analysis: Mycobacterium ulcerans Agy99



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 65.34 STD DEV: 3.10
Mycobacterium ulcerans Agy99, complete genome - 1..5631606
4160 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 61.25	-1	1..1533	+	510	118615920	dnaA	MUL_0001	-	chromosomal replication initiation protein
2	 63.52	0	2072..3280	+	402	118615921	dnaN	MUL_0002	-	DNA polymerase III subunit beta
3	 63.99	0	3301..4458	+	385	118615922	recF	MUL_0003	-	recombination protein F
4	 68.62	+1	4455..5018	+	187	118615923	-	MUL_0004	-	hypothetical protein
5	 61.71	-1	5228..7306	+	692	118615924	gyrB	MUL_0005	-	DNA gyrase subunit B
6	 64.37	0	7346..9865	+	839	118615925	gyrA	MUL_0006	-	DNA gyrase subunit A
7	 69.47	+1	9949..10947	+	332	118615926	-	MUL_0007	-	hypothetical protein
8	 69.53	+1	11361..12197	+	278	118615927	-	MUL_0010	-	hypothetical protein
9	 64.70	0	12225..12986	-	253	118615928	-	MUL_0011	-	transcriptional regulator
10	 70.86	+1	13097..13501	-	134	118615929	-	MUL_0012	-	hypothetical protein
11	 64.12	0	13691..14239	+	182	118615930	ppiA	MUL_0013	-	peptidyl-prolyl cis-trans isomerase A, PpiA
12	 65.73	0	14250..14675	-	141	118615931	-	MUL_0014	-	hypothetical protein
13	 58.16	-2	14831..15112	-	93	118615932	-	MUL_0015	-	putative septation inhibitor protein
14	 67.61	0	15241..15984	+	247	118615933	-	MUL_0016	-	hypothetical protein
15	 65.94	0	16022..16708	+	228	118615934	trpG	MUL_0017	-	para-aminobenzoate synthase component II
16	 66.19	0	16686..18566	-	626	118615935	pknB	MUL_0018	-	serine/threonine-protein kinase B PknB
17	 68.43	0	18563..19921	-	452	118615936	pknA	MUL_0019	-	serine/threonine-protein kinase a PknA
18	 67.62	0	19918..21393	-	491	118615937	pbpA	MUL_0020	-	penicillin-binding protein PbpA
19	 64.47	0	21390..22799	-	469	118615938	rodA	MUL_0021	-	cell division protein RodA
20	 67.12	0	22796..24355	-	519	118615939	pstP	MUL_0022	-	serine/threonine phosphatase PstP
21	 62.61	0	24352..24819	-	155	118615940	-	MUL_0023	-	hypothetical protein
22	 68.42	0	24953..26551	-	532	118615941	-	MUL_0024	-	hypothetical protein
23	 61.80	-1	26845..28179	+	444	118615942	-	MUL_0025	-	transposase for IS2606
24	 64.95	0	28617..29372	+	251	118615943	-	MUL_0027	-	glycosylase
25	 63.11	0	29488..30162	-	224	118615944	-	MUL_0028	-	shortchain dehydrogenase
26	 69.72	+1	30440..31192	+	250	118615945	-	MUL_0029	-	hypothetical protein
27	 66.67	0	32216..32920	-	234	118615946	-	MUL_0032	-	hypothetical protein
28	 65.58	0	33021..34220	-	399	118615947	proV_1	MUL_0033	-	osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport ATP-binding protein ABC transporter ProV_1
29	 62.96	0	34213..34860	-	215	118615948	-	MUL_0034	-	ABC transporter permease
30	 56.62	-2	35179..35586	+	135	118615949	-	MUL_0035	-	DNA-binding protein
31	 66.46	0	35688..36635	-	315	118615950	-	MUL_0036	-	hypothetical protein
32	 66.44	0	36765..38078	+	437	118615951	amt_1	MUL_0037	-	ammonium-transport integral membrane protein, Amt_1
33	 64.33	0	38088..38387	-	99	118615952	-	MUL_0038	-	hypothetical protein
34	 68.19	0	38384..39301	-	305	118615953	-	MUL_0039	-	hypothetical protein
35	 68.82	+1	39468..39884	-	138	118615954	whiB5	MUL_0040	-	transcriptional regulatory protein (Whib-like), WhiB5
36	 66.16	0	40027..40818	+	263	118615955	-	MUL_0041	-	transcriptional regulatory protein
37	 70.17	+1	40815..41642	+	275	118615956	-	MUL_0042	-	secreted protein P60-related protein
38	 66.40	0	41639..42019	+	126	118615957	-	MUL_0043	-	hypothetical protein
39	 68.25	0	42094..43359	+	421	118615958	-	MUL_0044	-	hypothetical protein
40	 64.47	0	43402..43719	+	105	118615959	-	MUL_0045	-	hypothetical protein
41	 65.19	0	43716..44120	+	134	118615960	-	MUL_0046	-	hypothetical protein
42	 67.57	0	44248..45354	+	368	118615961	-	MUL_0047	-	hypothetical protein
43	 62.93	0	45442..45762	+	106	118615962	-	MUL_0048	-	hypothetical protein
44	 62.30	0	45887..46069	+	60	118615963	-	MUL_0049	-	hypothetical protein
45	 71.19	+1	46161..46934	-	257	118615964	-	MUL_0050	-	hypothetical protein
46	 66.36	0	46937..48229	-	430	118615965	-	MUL_0051	-	integral membrane protein
47	 65.68	0	48389..48994	+	201	118615966	-	MUL_0052	-	hypothetical protein
48	 65.06	0	48981..49976	-	331	118615967	-	MUL_0053	-	hypothetical protein
49	 68.66	+1	50029..50379	-	116	118615968	-	MUL_0054	-	hypothetical protein
50	 72.49	+2	50464..51597	-	377	118615969	mtc28	MUL_0055	-	secreted proline rich protein Mtc28
51	 64.52	0	51796..54726	+	976	118615970	leuS	MUL_0056	-	leucyl-tRNA synthetase
52	 63.21	0	54756..55421	-	221	118615971	-	MUL_0057	-	short chain dehydrogenase
53	 66.67	0	55462..55965	-	167	118615972	-	MUL_0058	-	transcriptional regulatory protein
54	 63.66	0	58626..59390	-	254	118615973	-	MUL_0061	-	GntR family transcriptional regulator
55	 66.04	0	59501..60298	-	265	118615974	-	MUL_0062	-	oxidoreductase
56	 67.21	0	60330..61241	-	303	118615975	-	MUL_0063	-	hydrolase
57	 65.42	0	61287..62405	-	372	118615976	ino1	MUL_0064	-	myo-inositol-1-phosphate synthase Ino1
58	 67.77	0	62467..63009	-	180	118615977	-	MUL_0065	-	hypothetical protein
59	 66.44	0	63165..64034	-	289	118615978	-	MUL_0066	-	hypothetical protein
60	 63.91	0	64147..64581	+	144	118615979	-	MUL_0067	-	hypothetical protein
61	 65.69	0	65069..67111	+	680	118615980	ponA1	MUL_0068	-	bifunctional penicillin-binding protein 1A/1B PonA1
62	 64.23	0	67108..68748	+	546	118615981	-	MUL_0069	-	hypothetical protein
63	 65.88	0	68748..69386	+	212	118615982	-	MUL_0070	-	transcriptional regulatory protein
64	 62.20	-1	69510..69800	+	96	118615983	rpsF	MUL_0071	-	30S ribosomal protein S6
65	 68.02	0	69892..70407	+	171	118615984	ssb	MUL_0072	-	single-strand DNA-binding protein
66	 62.75	0	70453..70707	+	84	118615985	rpsR	MUL_0073	-	30S ribosomal protein S18
67	 66.23	0	70754..71212	+	152	118615986	rplI	MUL_0074	-	50S ribosomal protein L9
68	 64.50	0	71743..73125	+	460	118615987	dnaB	MUL_0075	-	replicative DNA helicase DnaB
69	 69.39	+1	73690..74349	+	219	118615988	-	MUL_0076	-	hypothetical protein
70	 67.46	0	74478..75104	-	208