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Rhizobium etli CIAT 652, complete genome - 1..4513324 4343 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 50.00 -2 123..500 - 125 190889640 - RHECIAT_CH0000001 - hypothetical protein 2 60.95 0 474..1295 + 273 190889641 - RHECIAT_CH0000002 - hypothetical protein 3 58.83 0 1329..1928 + 199 190889642 - RHECIAT_CH0000003 - putative septum formation protein 4 63.40 0 1921..2778 + 285 190889643 aroE RHECIAT_CH0000004 - shikimate 5-dehydrogenase protein 5 61.27 0 2778..3389 + 203 190889644 coaE RHECIAT_CH0000005 - dephospho-CoA kinase protein 6 61.29 0 3382..4107 + 241 190889645 dnaQ RHECIAT_CH0000006 - DNA polymerase III, epsilon chain protein 7 60.42 0 4220..4699 - 159 190889646 secB RHECIAT_CH0000007 - protein-export translocase chaperone protein 8 61.54 0 4801..5307 - 168 190889647 - RHECIAT_CH0000008 - hypothetical protein 9 61.11 0 5438..6139 + 233 190889648 - RHECIAT_CH0000009 - putative translocase transmembrane protein 10 61.66 0 6136..7254 + 372 190889649 mltA RHECIAT_CH0000010 - membrane-bound lytic murein transglycosylase protein 11 64.56 0 7254..7823 + 189 190889650 - RHECIAT_CH0000011 - putative DNA repair protein, Smr/mutS family 12 63.23 0 7820..8197 + 125 190889651 - RHECIAT_CH0000012 - putative transcriptional regulator protein 13 61.78 0 8333..10768 + 811 190889652 gyrB1 RHECIAT_CH0000013 - DNA gyrase protein, B subunit 14 61.00 0 10837..11436 - 199 190889653 - RHECIAT_CH0000014 - probable oxidoreductase protein 15 60.35 0 11480..11764 - 94 190889654 - RHECIAT_CH0000015 - hypothetical protein 16 57.76 -1 11938..12891 + 317 190889655 - RHECIAT_CH0000016 - putative glutathione-S-transferase protein 17 61.33 0 12984..13826 + 280 190889656 - RHECIAT_CH0000017 - 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase/5-carboxymethyl-2-oxo-hex-3-ene-1, 7-dioatedecarboxylase 18 59.70 0 14029..15306 + 425 190889657 - RHECIAT_CH0000018 - probable intracellular PHB depolymerase protein 19 59.67 0 15345..15887 + 180 190889658 - RHECIAT_CH0000019 - hypothetical protein 20 64.43 0 15997..16755 + 252 190889659 - RHECIAT_CH0000020 - putative zinc metallopeptidase protein 21 57.10 -1 16831..17499 + 222 190889660 trpF RHECIAT_CH0000021 - n-5'-phosphoribosylanthranilate isomerase protein 22 63.23 0 17502..18722 + 406 190889661 trpB RHECIAT_CH0000022 - tryptophan synthase protein, beta chain 23 63.57 0 18726..19565 + 279 190889662 trpA RHECIAT_CH0000023 - tryptophan synthase protein, alpha chain 24 61.04 0 19605..20510 + 301 190889663 accD RHECIAT_CH0000024 - acetyl-CoA carboxylase, carboxil transferase protein, beta subunit 25 61.49 0 20538..21890 + 450 190889664 folC RHECIAT_CH0000025 - folC 26 55.45 -1 21965..22285 - 106 190889665 trxA1 RHECIAT_CH0000026 - thioredoxin protein 27 64.78 0 22361..25912 - 1183 190889666 - RHECIAT_CH0000027 - probable ATP-dependent exonuclease V protein, nuclease and helicase domains 28 66.70 +1 25905..29099 - 1064 190889667 - RHECIAT_CH0000028 - hypothetical protein 29 62.43 0 29103..29834 - 243 190889668 - RHECIAT_CH0000029 - probable nucleotidyltransferase protein 30 63.82 0 29848..31359 - 503 190889669 - RHECIAT_CH0000030 - hypothetical protein 31 64.62 0 31356..33941 - 861 190889670 - RHECIAT_CH0000031 - probable two-component sensor histidine kinase protein 32 61.03 0 34145..35545 - 466 190889671 ahcY RHECIAT_CH0000032 - S-adenosylhomocysteine hydrolase protein 33 63.41 0 35822..36097 - 91 190889672 - RHECIAT_CH0000033 - putative phosphocarrier protein HPr protein 34 57.96 -1 36107..36508 - 133 190889673 - RHECIAT_CH0000034 - probable protein-N(pi)-phosphohistidine-sugar phosphotransferase protein (Enzyme II of the phosphotransferase system) 35 63.78 0 36659..37108 - 149 190889674 - RHECIAT_CH0000035 - hypothetical protein 36 63.07 0 37105..38883 - 592 190889675 chvG RHECIAT_CH0000036 - two-component sensor histidine kinase protein 37 62.83 0 38974..39729 - 251 190889676 chvI RHECIAT_CH0000037 - two-component response regulator protein 38 40.48 -2 39861..40070 - 69 190889677 - RHECIAT_CH0000038 - hypothetical protein 39 63.69 0 40050..41660 + 536 190889678 pckA RHECIAT_CH0000039 - phosphoenolpyruvate carboxykinase protein 40 63.01 0 41782..42219 + 145 190889679 - RHECIAT_CH0000040 - probable peptide chain release factor protein (peptidyl-tRNA hydrolase protein) 41 62.75 0 42221..42832 + 203 190889680 alkB RHECIAT_CH0000041 - alkylated DNA repair protein 42 59.54 0 42856..43851 - 331 190889681 coaA RHECIAT_CH0000042 - pantothenate kinase protein 43 57.72 -1 43848..44171 - 107 190889682 hisE RHECIAT_CH0000043 - phosphoribosyl-ATP pyrophosphohydrolase protein 44 64.77 0 44189..44977 - 262 190889683 hisF RHECIAT_CH0000044 - imadazoleglycerol-phosphate synthase protein 45 63.86 0 44977..45723 - 248 190889684 hisA RHECIAT_CH0000045 - phosphoribosylformino-5-aminoimidazole carboxamide ribonucleotide isomerase protein 46 59.50 0 45730..46287 - 185 190889685 - RHECIAT_CH0000046 - hypothetical protein 47 60.42 0 46284..46475 - 63 190889686 - RHECIAT_CH0000047 - hypothetical protein 48 63.44 0 46519..47169 - 216 190889687 hisH RHECIAT_CH0000048 - imadazoleglycerol phosphate synthase protein subunit HisH 49 62.53 0 47172..47654 - 160 190889688 - RHECIAT_CH0000049 - hypothetical protein 50 60.92 0 47677..48285 - 202 190889689 hisB RHECIAT_CH0000050 - imidazoleglycerol-phosphate dehydratase protein 51 60.80 0 48461..48988 + 175 190889690 hslV RHECIAT_CH0000051 - ATP-dependent heat shock protease HslVU protein, peptidase subunit HslV 52 62.23 0 49107..50414 + 435 190889691 hslU RHECIAT_CH0000052 - ATP-dependent heat shock protease HslVU protein, chaperone ATP-binding subunit HslU 53 60.34 0 50603..51550 + 315 190889692 - RHECIAT_CH0000053 - hypothetical protein 54 61.36 0 51599..53011 + 470 190889693 - RHECIAT_CH0000054 - probable cytochrome P450 protein 55 61.33 0 53097..55268 + 723 190889694 glcB RHECIAT_CH0000055 - malate synthase protein 56 63.89 0 55345..56028 - 227 190889695 - RHECIAT_CH0000056 - hypothetical protein 57 57.58 -1 56208..56702 + 164 190889696 - RHECIAT_CH0000057 - hypothetical protein 58 61.83 0 56713..57291 - 192 190889697 actR RHECIAT_CH0000058 - two-component response regulator protein 59 60.64 0 57362..58672 - 436 190889698 actS RHECIAT_CH0000059 - two-component sensor histidine kinase protein 60 67.15 +1 58700..61165 - 821 190889699 helO RHECIAT_CH0000060 - ATP-dependent helicase protein 61 64.45 0 61162..62109 - 315 190889700 ocdch RHECIAT_CH0000061 - ornithine cyclodeaminase protein 62 61.94 0 68837..69217 - 126 190889701 - RHECIAT_CH0000068 - hypothetical protein 63 60.47 0 71673..74753 - 1026 190889702 - RHECIAT_CH0000069 - hypothetical protein 64 53.64 -2 75216..75998 + 260 190889703 - RHECIAT_CH0000070 - probable transcriptional regulator protein, LuxR family 65 62.18 0 76101..76457 - 118 190889704 - RHECIAT_CH0000071 - hypothetical protein 66 61.39 0 76807..77829 + 340 190889705 - RHECIAT_CH0000072 - probable dTDP-glucose 4,6-dehydratase protein 67 63.52 0 77831..78814 + 327 190889706 galE1 RHECIAT_CH0000073 - UDP-glucose 4-epimerase protein 68 62.98 0 78811..80682 + 623 190889707 - RHECIAT_CH0000074 - probable cellulose synthase protein 69 60.73 0 80716..81237 + 173 190889708 - RHECIAT_CH0000075 - hypothetical protein 70 61.11 0 81241..82212 + 323 190889709 - RHECIAT_CH0000076 - putative polysaccharide degradation protein 71 62.00 0 82318..83604 - 428 190889710 - RHECIAT_CH0000077 - putative sugar ABC transporter, substrate-binding protein 72 66.09 +1 83749..84780 + 343 190889711 - RHECIAT_CH0000078 - probable transcriptional regulator protein, LacI family 73 63.49 0 84785..86641 + 618 190889712 - RHECIAT_CH0000079 - hypothetical protein 74 64.99 0 86638..87648 + 336 190889713 - RHECIAT_CH0000080 - probable D-2-hydroxyacid dehydrogenase protein 75 60.49 0 87672..88949 - 425 190889714 - RHECIAT_CH0000081 - putative oxidoreducatse protein 76 64.14 0 88991..89821 - 276 190889715 - RHECIAT_CH0000082 - putative xylose isomerase domain protein 77 63.83 0 89852..91015 - 387 190889716 - RHECIAT_CH0000083 - hypothetical protein 78 64.32 0 91019..92167 - 382 190889717 - RHECIAT_CH0000084 - putative oxidoreductase protein 79 62.98 0 92298..92975 - 225 190889718 - RHECIAT_CH0000085 - probable transcriptional regulator protein, TetR family 80 60.84 0 93238..94524 + 428 190889719 - RHECIAT_CH0000086 - probable sugar ABC transporter, substrate-binding protein 81 61.67 0 94531..95490 + 319 190889720 - RHECIAT_CH0000087 - probable sugar ABC transporter, permease protein 82 59.23 0 95483..96370 + 295 190889721 - RHECIAT_CH0000088 - probable sugar ABC transporter, permease protein 83 62.01 0 96394..97467 + 357 190889722 - RHECIAT_CH0000089 - putative oxidoreductase protein 84 62.67 0 97505..98581 + 358 190889723 - RHECIAT_CH0000090 - probable sugar ABC transporter, ATP-binding protein 85 61.19 0 98680..99555 + 291 190889724 - RHECIAT_CH0000091 - putative ethanolamine kinase protein 86 62.63 0 99556..102006 + 816 190889725 - RHECIAT_CH0000092 - probable sarcosine dehydrogenase protein 87 64.47 0 102290..103747 - 485 190889726 uxuB RHECIAT_CH0000093 - D-mannonate oxidoreductase protein 88 64.76 0 103744..105159 - 471 190889727 uxaC RHECIAT_CH0000094 - glucuronate isomerase protein 89 58.90 0 105241..105549 + 102 190889728 - RHECIAT_CH0000095 - hypothetical protein 90 65.38 +1 105596..107077 - 493 190889729 gabDch RHECIAT_CH0000096 - succinate-semialdehyde dehydrogenase (NAD(P)(+)) protein 91 65.03 0 107135..108415 - 426 190889730 gabT RHECIAT_CH0000097 - 4-aminobutyrate aminotransferase protein 92 65.55 +1 108579..109385 + 268 190889731 - RHECIAT_CH0000098 - probable transcriptional regulator protein, MerR family 93 61.56 0 109491..110117 + 208 190889732 rnd1 RHECIAT_CH0000099 - ribonuclease III protein 94 66.15 +1 110390..111940 + 516 190889733 - RHECIAT_CH0000100 - hypothetical protein 95 60.33 0 112019..113722 - 567 190889734 rpsA RHECIAT_CH0000101 - 30S ribosomal protein S1 96 63.73 0 113896..114543 - 215 190889735 cmk RHECIAT_CH0000102 - cytidylate kinase protein 97 57.29 -1 114873..115256 + 127 190889736 - RHECIAT_CH0000103 - hypothetical protein 98 50.00 -2 115603..115842 + 79 190889737 - RHECIAT_CH0000105 - putative excinuclease ABC protein, C subunit 99 61.51 0 115961..117784 - 607 190889738 - RHECIAT_CH0000106 - hypothetical protein 100 59.59 0 118016..119131 + 371 190889739 - RHECIAT_CH0000107 - putative fusion protein: hypothetical conserved protein and adenylate cyclase protein 61.82 MEAN 3.47 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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