version 1.0
Xylella fastidiosa Temecula1, complete genome - 1..2519802 2034 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 41.29 -2 146..1465 + 439 28197946 dnaA PD0001 - chromosomal replication initiation protein 2 37.42 -2 1747..2847 + 366 28197947 dnaN PD0002 - DNA polymerase III subunit beta 3 41.00 -2 3153..4247 + 364 28197948 recF PD0003 - recombination protein F 4 35.37 -2 4501..4746 + 81 28197949 - PD0004 - hypothetical protein 5 46.67 -1 4743..7187 + 814 28197950 gyrB PD0005 - DNA gyrase subunit B 6 44.59 -1 7388..8062 + 224 28197951 - PD0006 - hypothetical protein 7 50.61 0 8127..8942 + 271 28197952 - PD0007 - hypothetical protein 8 44.22 -1 9046..10239 + 397 28197953 - PD0008 - hypothetical protein 9 52.10 0 10683..11348 + 221 28197954 tonB PD0009 - TonB protein 10 50.33 0 11444..12208 + 254 28197955 exbB PD0010 - biopolymer transport ExbB protein 11 42.62 -1 12265..12684 + 139 28197956 exbD1 PD0011 - biopolymer transport ExbD1 protein 12 45.01 -1 12691..13101 + 136 28197957 exbD2 PD0012 - biopolymer transport ExbD2 protein 13 51.68 0 13819..16206 + 795 28197958 - PD0013 - dipeptidyl-peptidase 14 52.49 0 16261..16803 + 180 28197959 - PD0014 - hypothetical protein 15 53.81 0 17033..17950 + 305 28197960 hemF PD0015 - coproporphyrinogen III oxidase 16 38.72 -2 20838..21134 + 98 28197961 - PD0017 - hypothetical protein 17 50.05 0 21593..22687 - 364 77747623 aroG PD0018 - phospho-2-dehydro-3-deoxyheptonate aldolase 18 53.37 0 23858..24421 + 187 28197963 fimT PD0019 - pre-pilin like leader sequence 19 50.62 0 24431..24910 + 159 28197964 pilV PD0020 - pre-pilin leader sequence 20 50.47 0 24907..25857 + 316 28197965 - PD0021 - hypothetical protein 21 50.51 0 25854..26441 + 195 28197966 pilX PD0022 - PilX protein 22 52.78 0 26465..30109 + 1214 28197967 pilY1 PD0023 - PilY1 protein 23 50.51 0 30136..30531 + 131 28197968 pilE PD0024 - PilE protein 24 53.61 0 30962..31696 - 244 28197969 pyrF PD0025 - orotidine 5'-phosphate decarboxylase 25 52.04 0 32820..34022 + 400 28197970 tyrB PD0026 - aromatic amino acid aminotransferase 26 45.43 -1 34906..35310 - 134 28197971 mscL PD0027 - large-conductance mechanosensitive channel 27 46.33 -1 35638..35991 - 117 28197972 - PD0028 - hypothetical protein 28 48.31 0 36056..36262 + 68 28197973 - PD0029 - hypothetical protein 29 53.37 0 36277..37539 + 420 28197974 - PD0030 - hypothetical protein 30 56.24 0 37722..38603 + 293 28197975 comJ PD0031 - transformation competence-related protein 31 53.59 0 39197..39739 + 180 28197976 - PD0032 - hypothetical protein 32 54.43 0 39807..43394 + 1195 28197977 mfd PD0033 - transcription-repair coupling factor 33 52.35 0 44016..44462 + 148 77747624 aroQ PD0034 - 3-dehydroquinate dehydratase 34 53.70 0 44525..45010 + 161 28197979 accB PD0035 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 35 54.09 0 45068..46435 + 455 28197980 accC PD0036 - acetyl-CoA carboxylase biotin carboxylase subunit 36 54.64 0 46613..48799 - 728 28197981 uvrD PD0037 - DNA-dependent helicase II 37 47.40 0 50073..51266 + 397 28197982 hmpA PD0038 - nitric oxide dioxygenase 38 46.47 -1 53116..53427 + 103 28197983 - PD0039 - hypothetical protein 39 51.47 0 53424..54206 + 260 28197984 pdxJ PD0040 - pyridoxal phosphate biosynthetic protein PdxJ 40 43.95 -1 54701..55774 - 357 28197985 korB PD0041 - transcriptional repressor 41 51.65 0 56876..57601 - 241 28197986 comF PD0042 - competence protein F 42 51.36 0 57651..58676 + 341 28197987 bioB PD0043 - biotin synthase 43 50.91 0 59071..60111 + 346 28197988 - PD0044 - lipoprotein 44 39.92 -2 60529..60771 + 80 28197989 - PD0045 - hypothetical protein 45 53.78 0 60887..61786 - 299 28197990 ubiA PD0046 - 4-hydroxybenzoate octaprenyltransferase 46 52.08 0 71282..72097 + 271 28197991 mutM PD0053 - formamidopyrimidine-DNA glycosylase 47 46.98 -1 72234..73076 - 280 28197992 - PD0054 - hypothetical protein 48 48.98 0 73166..74533 + 455 28197993 ffh PD0055 - signal recognition particle protein 49 45.16 -1 74857..75228 + 123 28197994 - PD0056 - hypothetical protein 50 51.75 0 75271..76068 + 265 28197995 - PD0057 - hypothetical protein 51 49.75 0 76380..77360 - 326 77747625 mrkD PD0058 - fimbrial adhesin precursor 52 52.63 0 79042..81555 - 837 28197997 fimD PD0060 - outer membrane usher protein precursor 53 48.69 0 81774..82574 - 266 28197998 - PD0061 - chaperone protein precursor 54 52.61 0 82646..83200 - 184 28197999 - PD0062 - fimbrial subunit precursor 55 53.17 0 84808..85296 - 162 28198000 - PD0063 - hypothetical protein 56 51.53 0 85376..86683 - 435 28198001 kgtP PD0064 - alpha-ketoglutarate permease symporter 57 53.81 0 86732..88084 - 450 28198002 - PD0065 - GTP-binding protein 58 45.52 -1 88099..88377 - 92 28198003 hfq PD0066 - RNA-binding protein Hfq 59 53.25 0 88481..89434 - 317 28198004 miaA PD0067 - tRNA delta(2)-isopentenylpyrophosphate transferase 60 54.96 0 89434..90330 - 298 28198005 folP PD0068 - dihydropteroate synthase 61 48.31 0 90431..90637 + 68 28198006 - PD0069 - hypothetical protein 62 51.14 0 90639..92576 - 645 28198007 hflB PD0070 - cell division protein 63 49.69 0 92623..93264 - 213 28198008 ftsJ PD0071 - cell division protein 64 47.39 0 93334..93639 + 101 28198009 - PD0072 - hypothetical protein 65 53.54 0 93658..94038 + 126 28198010 - PD0073 - hypothetical protein 66 54.50 0 94622..96454 - 610 28198011 ilvD PD0074 - dihydroxy-acid dehydratase 67 59.60 +1 97444..97641 + 65 77747626 - PD0075 - hypothetical protein 68 56.85 0 97642..98772 + 376 28198013 - PD0076 - glycosyl transferase 69 55.93 0 98753..100084 + 443 28198014 - PD0077 - membrane protein 70 56.13 0 100273..101193 - 306 28198015 htrB PD0078 - lipid A biosynthesis lauroyl acyltransferase 71 54.00 0 101272..102582 + 436 28198016 kdtA PD0079 - 3-deoxy-D-manno-octulosonic-acid transferase 72 51.63 0 102966..104348 + 460 28198017 - PD0080 - hypothetical protein 73 54.02 0 104564..104824 + 86 28198018 rpsP PD0081 - 30S ribosomal protein S16 74 51.85 0 104868..105380 + 170 28198019 rimM PD0082 - 16S rRNA-processing protein 75 53.05 0 105490..106275 + 261 28198020 trmD PD0083 - tRNA (guanine-N(1)-)-methyltransferase 76 48.91 0 106440..106850 + 136 28198021 rplS PD0084 - 50S ribosomal protein L19 77 53.33 0 107274..108053 + 259 77747627 map PD0085 - methionine aminopeptidase 78 54.08 0 108793..109626 + 277 161484690 dapD PD0086 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 79 47.90 0 109641..109997 + 118 28198024 - PD0087 - hypothetical protein 80 56.61 0 110153..111286 + 377 28198025 dapE PD0088 - succinyl-diaminopimelate desuccinylase 81 54.96 0 111688..113379 + 563 28198026 asnB PD0089 - asparagine synthetase B 82 49.76 0 113437..114465 - 342 28198027 - PD0090 - hypothetical protein 83 58.24 +1 115511..116542 + 343 28198028 - PD0091 - hypothetical protein 84 52.52 0 117015..117650 + 211 28198029 lexA PD0092 - LexA repressor 85 51.25 0 117832..118875 + 347 28198030 recA PD0093 - recombinase A 86 52.50 0 119363..122017 + 884 28198031 alaS PD0094 - alanyl-tRNA synthetase 87 49.07 0 122156..122371 + 71 28198032 csrA PD0095 - carbon storage regulator 88 56.40 0 123486..125510 - 674 28198033 prlC PD0097 - oligopeptidase A 89 56.73 0 125570..126676 - 368 28198034 cysK PD0098 - cysteine synthase 90 59.79 +1 127195..127572 + 125 77747629 - PD0099 - hypothetical protein 91 57.72 +1 127660..129492 + 610 28198036 copA PD0100 - copper resistance protein A precursor 92 60.22 +1 129489..130418 + 309 28198037 copB PD0101 - copper resistance protein B precursor 93 58.73 +1 130675..133659 - 994 28198038 valS PD0102 - valyl-tRNA synthetase 94 51.79 0 133712..133906 - 64 28198039 - PD0103 - hypothetical protein 95 60.56 +1 133969..134394 - 141 28198040 holC PD0104 - DNA polymerase III subunit chi 96 43.59 -1 134394..134861 - 155 28198041 - PD0105 - hypothetical protein 97 61.72 +1 134840..136315 - 491 28198042 pepA PD0106 - leucyl aminopeptidase 98 55.43 0 136425..137510 + 361 28198043 - PD0107 - hypothetical protein 99 53.57 0 137507..138613 + 368 28198044 - PD0108 - hypothetical protein 100 59.28 +1 138531..139085 - 184 28198045 - PD0109 - hypothetical protein 52.22 MEAN 5.17 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.