version 1.0
Candidatus Amoebophilus asiaticus 5a2, complete genome - 1..1884364 1283 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 34.17 0 513..1946 + 477 189501471 - Aasi_0001 - chromosomal replication initiator protein DnaA 2 26.95 -2 2481..2621 + 46 189501472 - Aasi_0002 - hypothetical protein 3 34.44 0 2729..3181 + 150 189501473 - Aasi_0003 - hypothetical protein 4 31.50 -1 3506..4213 + 235 189501474 - Aasi_0004 - hypothetical protein 5 39.59 +1 4719..6125 + 468 189501475 - Aasi_0005 - RNA methyltransferase, TrmA family 6 36.20 0 7774..8157 + 127 189501476 - Aasi_0007 - hypothetical protein 7 37.46 0 8655..11222 - 855 189501477 - Aasi_0008 - hypothetical protein 8 36.18 0 11922..12869 - 315 189501478 - Aasi_0009 - helix-turn-helix- domain containing protein AraC type 9 37.79 0 12859..13554 - 231 189501479 - Aasi_0010 - tRNA (guanine-N1)-methyltransferase 10 33.14 0 13770..15353 + 527 189501480 - Aasi_0011 - permease YjgP/YjgQ family protein 11 33.33 0 15554..15829 + 91 189501481 - Aasi_0012 - ribosomal protein S15 12 37.49 0 16013..18154 + 713 189501482 - Aasi_0013 - 3' exoribonuclease 13 39.70 +1 18265..19128 + 287 189501483 - Aasi_0014 - RNA polymerase sigma factor, sigma-70 family 14 41.77 +1 19139..20086 + 315 189501484 - Aasi_0015 - thioredoxin reductase 15 39.07 +1 20692..22086 + 464 189501485 - Aasi_0016 - phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 16 37.46 0 22095..23234 + 379 189501486 - Aasi_0017 - aminotransferase class V 17 37.13 0 23304..24014 + 236 189501487 - Aasi_0018 - Lipoprotein signal peptidase-like protein 18 37.56 0 24584..25435 - 283 189501488 - Aasi_0019 - Appr-1-p processing domain protein 19 37.06 0 25639..26496 + 285 189501489 - Aasi_0020 - modification methylase, HemK family 20 35.03 0 26619..27500 + 293 189501490 - Aasi_0021 - hypothetical protein 21 35.30 0 27558..28523 + 321 189501491 - Aasi_0022 - Ppx/GppA phosphatase 22 36.76 0 28635..30386 + 583 189501492 - Aasi_0023 - proton-translocating NADH-quinone oxidoreductase, chain M 23 35.40 0 30465..32255 + 596 189501493 - Aasi_0024 - excinuclease ABC, C subunit 24 36.39 0 32750..35173 - 807 189501494 - Aasi_0025 - cyclin domain protein F-box protein 25 37.69 0 35559..36683 + 374 189501495 - Aasi_0026 - queuine tRNA-ribosyltransferase 26 34.08 0 36777..37850 + 357 189501496 - Aasi_0027 - permease YjgP/YjgQ family protein 27 33.44 0 37868..40612 + 914 189501497 - Aasi_0028 - hypothetical protein 28 38.39 0 40678..41922 + 414 189501498 - Aasi_0029 - catalytic domain of components of various dehydrogenase complexes 29 37.59 0 42029..42568 + 179 189501499 - Aasi_0030 - 20S proteasome A and B subunits 30 36.88 0 43964..44790 + 275 189501500 - Aasi_0033 - hypothetical protein 31 36.91 0 44884..47175 - 763 189501501 - Aasi_0034 - Sel1 domain protein repeat-containing protein 32 31.37 -1 47185..47337 - 50 189501502 - Aasi_0035 - hypothetical protein 33 38.53 0 47624..48952 - 442 189501503 - Aasi_0036 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 34 34.93 0 48996..49622 - 208 189501504 - Aasi_0037 - hypothetical protein 35 36.81 0 49679..51952 - 757 189501505 - Aasi_0038 - UvrD/REP helicase 36 35.06 0 52143..53936 - 597 189501506 - Aasi_0039 - hypothetical protein 37 37.72 0 54870..58199 + 1109 189501507 - Aasi_0040 - metal-dependent phosphohydrolase HD sub domain 38 40.82 +1 58835..58981 + 48 189501508 - Aasi_0042 - ribonuclease HII 39 33.85 0 59117..60853 + 578 189501509 - Aasi_0043 - GTP-binding protein HSR1-related 40 35.20 0 60944..62335 + 463 189501510 - Aasi_0044 - hypothetical protein 41 30.18 -1 62432..63223 + 263 189501511 - Aasi_0045 - hypothetical protein 42 33.84 0 64244..66004 - 586 189501512 - Aasi_0047 - ABC transporter related 43 34.51 0 66037..66798 - 253 189501513 - Aasi_0048 - tRNA pseudouridine synthase A 44 37.77 0 67133..67966 - 277 189501514 - Aasi_0049 - translation elongation factor Ts 45 39.92 +1 68187..69128 - 313 189501515 - Aasi_0050 - ribosomal protein S2 46 35.92 0 69154..69540 - 128 189501516 - Aasi_0051 - ribosomal protein S9 47 37.33 0 69545..69994 - 149 189501517 - Aasi_0052 - ribosomal protein L13 48 37.43 0 70420..71127 - 235 189501518 - Aasi_0053 - hypothetical protein 49 34.10 0 71130..71519 - 129 189501519 - Aasi_0054 - Biopolymer transport protein ExbD/TolR 50 34.65 0 71509..72192 - 227 189501520 - Aasi_0055 - MotA/TolQ/ExbB proton channel 51 35.30 0 72251..73063 - 270 189501521 - Aasi_0056 - hypothetical protein 52 35.70 0 73225..73815 - 196 189501522 - Aasi_0057 - methyladenine glycosylase 53 36.56 0 73929..74735 + 268 189501523 - Aasi_0058 - enoyl-(acyl-carrier-protein) reductase (NADH) 54 26.83 -2 76240..76362 + 40 189501524 - Aasi_0060 - hypothetical protein 55 34.90 0 76613..77632 + 339 189501525 - Aasi_0061 - ATP synthase F0, A subunit 56 39.84 +1 77699..77944 + 81 189501526 - Aasi_0062 - ATP synthase F0, C subunit 57 32.93 0 77973..78467 + 164 189501527 - Aasi_0063 - ATP synthase F0, B subunit 58 31.03 -1 78476..79084 + 202 189501528 - Aasi_0064 - ATP synthase F1, delta subunit 59 40.03 +1 79134..80732 + 532 189501529 - Aasi_0065 - ATP synthase F1, alpha subunit 60 34.82 0 80760..81632 + 290 189501530 - Aasi_0066 - ATP synthase F1, gamma subunit 61 33.27 0 83226..84704 - 492 189501531 - Aasi_0069 - ADP/ATP carrier protein 62 37.69 0 86065..86706 - 213 189501532 - Aasi_0071 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 63 36.73 0 86884..87746 - 287 189501533 - Aasi_0072 - hypothetical protein 64 33.69 0 87889..88737 + 282 189501534 - Aasi_0073 - protein of unknown function DUF6 transmembrane 65 33.00 0 88955..90172 - 405 189501535 - Aasi_0074 - protein of unknown function DUF214 66 31.89 -1 90466..90951 + 161 189501536 - Aasi_0075 - hypothetical protein 67 40.92 +1 91051..91485 + 144 189501537 - Aasi_0076 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut 68 35.91 0 91507..92517 + 336 189501538 - Aasi_0077 - Nucleotidyl transferase 69 35.62 0 92785..93528 + 247 189501539 - Aasi_0078 - hypothetical protein 70 32.94 0 93515..94774 + 419 189501540 - Aasi_0079 - Peptidase M23 71 33.55 0 95178..95645 - 155 189501541 - Aasi_0080 - hypothetical protein 72 29.17 -2 95832..95951 - 39 189501542 - Aasi_0081 - hypothetical protein 73 36.15 0 96654..97516 - 287 189501543 - Aasi_0082 - hypothetical protein 74 35.46 0 97707..98741 - 344 189501544 - Aasi_0083 - peptidase U61 LD-carboxypeptidase A 75 35.16 0 99025..100392 + 455 189501545 - Aasi_0084 - peptidase S14 ClpP 76 34.04 0 101575..101715 + 46 189501546 - Aasi_0086 - hypothetical protein 77 36.72 0 101734..101910 + 58 189501547 - Aasi_0087 - hypothetical protein 78 38.95 +1 101889..103580 - 563 189501548 - Aasi_0088 - Leucine-rich repeat, ribonuclease inhibitor subtype 79 37.44 0 103697..104524 + 275 189501549 - Aasi_0089 - transposase IS4 family protein 80 38.33 0 104579..104758 - 59 189501550 - Aasi_0090 - hypothetical protein 81 32.48 0 105017..105718 - 233 189501551 - Aasi_0091 - CDP-diacylglycerol/serine O-phosphatidyltransferase 82 35.21 0 106022..109009 + 995 189501552 - Aasi_0092 - protein-export membrane protein SecD 83 32.96 0 109254..110321 + 355 189501553 - Aasi_0093 - Ankyrin 84 36.67 0 110824..111273 + 149 189501554 - Aasi_0094 - hypothetical protein 85 34.66 0 111403..112005 + 200 189501555 - Aasi_0095 - hypothetical protein 86 42.47 +2 112437..112994 + 185 189501556 - Aasi_0096 - Resolvase domain 87 32.29 -1 113051..113815 + 254 189501557 - Aasi_0097 - protein of unknown function DUF1624 88 35.95 0 114440..115393 - 317 189501558 - Aasi_0098 - hypothetical protein 89 33.70 0 115647..116999 + 450 189501559 - Aasi_0099 - hypothetical protein 90 34.52 0 117111..117362 + 83 189501560 - Aasi_0100 - ribosomal protein S20 91 37.30 0 117463..118194 + 243 189501561 - Aasi_0101 - DNA repair protein RadC 92 35.32 0 118282..120702 + 806 189501562 - Aasi_0102 - phenylalanyl-tRNA synthetase, beta subunit 93 34.36 0 120712..121002 + 96 189501563 - Aasi_0103 - hypothetical protein 94 34.74 0 121009..121293 + 94 189501564 - Aasi_0104 - hypothetical protein 95 39.09 +1 121286..122032 - 248 189501565 - Aasi_0105 - 3-oxoacyl-(acyl-carrier-protein) reductase 96 32.73 0 122543..125842 + 1099 189501566 - Aasi_0106 - hypothetical protein 97 32.05 -1 126094..126405 + 103 189501567 - Aasi_0107 - ribosomal protein L21 98 39.39 +1 126413..126676 + 87 189501568 - Aasi_0108 - ribosomal protein L27 99 35.83 0 126750..127109 + 119 189501569 - Aasi_0109 - ribosomal protein S16 100 39.48 +1 127661..128425 - 254 189501570 - Aasi_0110 - Leucine-rich repeat, ribonuclease inhibitor subtype 35.54 MEAN 3.18 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.