version 1.0
Escherichia coli SMS-3-5, complete genome - 1..5068389 4743 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 53.19 0 336..2798 + 820 170684018 thrA EcSMS35_0001 - aspartokinase/homoserine dehydrogenase I 2 56.06 +1 2800..3732 + 310 170681884 thrB EcSMS35_0002 - homoserine kinase 3 52.76 0 3733..5019 + 428 170682268 thrC EcSMS35_0003 - threonine synthase 4 53.82 0 5309..5557 - 82 170680562 - EcSMS35_0004 - hypothetical protein 5 49.42 0 5569..6345 - 258 170682084 - EcSMS35_0005 - hypothetical protein 6 53.39 0 6415..7845 - 476 170680075 agcS EcSMS35_0006 - amino acid carrier protein 7 51.62 0 8061..9077 + 338 170681632 tal2 EcSMS35_0007 - transaldolase 8 54.08 0 9192..9779 + 195 170683195 mog EcSMS35_0008 - molybdopterin biosynthesis protein Mog 9 52.56 0 9814..10380 - 188 170680604 - EcSMS35_0009 - GPR1/FUN34/yaaH family membrane protein 10 50.84 0 10529..11242 - 237 170683397 - EcSMS35_0010 - hypothetical protein 11 48.64 0 11267..11671 - 134 170680475 - EcSMS35_0011 - hypothetical protein 12 51.33 0 12047..13963 + 638 170682035 dnaK EcSMS35_0012 - chaperone protein DnaK 13 55.17 0 14052..15182 + 376 170683873 dnaJ EcSMS35_0013 - chaperone protein DnaJ 14 40.81 -1 16050..16811 + 253 170681886 - EcSMS35_0014 - hypothetical protein 15 45.78 0 16831..18324 + 497 170683329 - EcSMS35_0015 - sulfatase 16 41.04 -1 18454..19698 + 414 170682715 - EcSMS35_0016 - hypothetical protein 17 51.24 0 19950..21116 + 388 170684120 nhaA EcSMS35_0017 - sodium/proton antiporter nhaA 18 48.12 0 21176..22081 + 301 170681624 nhaR EcSMS35_0018 - transcriptional activator NhaR 19 50.25 0 22139..24178 - 679 170681287 - EcSMS35_0019 - glycosy hydrolase family protein 20 48.03 0 24218..25591 - 457 170680613 xlyP EcSMS35_0020 - xylose-proton symporter 21 28.46 -2 25804..25926 + 40 170680097 - EcSMS35_0021 - hypothetical protein 22 46.21 0 25999..26262 - 87 170683345 rpsT EcSMS35_0022 - ribosomal protein S20 23 53.82 0 26591..27532 + 313 170680169 ribF EcSMS35_0023 - riboflavin biosynthesis protein RibF 24 55.48 0 27575..30391 + 938 170684022 ileS EcSMS35_0024 - isoleucyl-tRNA synthetase 25 52.93 0 30391..30885 + 164 170679728 lspA EcSMS35_0025 - signal peptidase II 26 54.67 0 30973..31422 + 149 170682408 fkpB EcSMS35_0026 - FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase 27 55.21 0 31424..32374 + 316 170684275 ispH EcSMS35_0027 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 28 54.75 0 32440..33354 + 304 170680986 rihC EcSMS35_0028 - nonspecific ribonucleoside hydrolase RihC 29 53.41 0 33521..34342 + 273 170682871 dapB EcSMS35_0029 - dihydrodipicolinate reductase 30 25.68 -2 34354..34536 - 60 170679708 - EcSMS35_0030 - hypothetical protein 31 38.41 -2 34621..34758 + 45 170680139 - EcSMS35_0031 - hypothetical protein 32 53.06 0 34771..35946 + 391 170683312 carA EcSMS35_0032 - carbamoyl-phosphate synthase, small subunit 33 56.70 +1 35964..39185 + 1073 170680299 carB EcSMS35_0033 - carbamoyl-phosphate synthase, large subunit 34 35.62 -2 39193..39411 - 72 170682795 - EcSMS35_0034 - hypothetical protein 35 46.21 0 39446..39841 + 131 170680121 caiF EcSMS35_0035 - transcriptional activatory protein CaiF 36 55.67 0 39960..40550 - 196 170683173 caiE EcSMS35_0036 - carnitine operon protein caiE 37 54.20 0 40556..41341 - 261 170683826 caiD EcSMS35_0037 - carnitinyl-CoA dehydratase 38 51.35 0 41450..43003 - 517 170681586 - EcSMS35_0038 - putative crotonobetaine/carnitine-CoA ligase 39 52.55 0 43077..44294 - 405 170681966 caiB EcSMS35_0039 - crotonobetainyl-CoA:carnitine CoA-transferase 40 53.72 0 44423..45565 - 380 170680462 caiA EcSMS35_0040 - crotonobetainyl-CoA dehydrogenase 41 52.15 0 45596..47110 - 504 170680951 caiT EcSMS35_0041 - L-carnitine/gamma-butyrobetaine antiporter 42 32.67 -2 47226..47375 + 49 170683443 - EcSMS35_0042 - hypothetical protein 43 52.40 0 47583..48353 + 256 170684267 fixA EcSMS35_0043 - protein FixA 44 56.37 +1 48368..49309 + 313 170682403 fixB EcSMS35_0044 - electron transfer flavoprotein, alpha subunit 45 54.55 0 49360..50646 + 428 170682933 fixC EcSMS35_0045 - protein FixC 46 57.29 +1 50643..50930 + 95 170680948 fixX EcSMS35_0046 - ferredoxin homolog FixX 47 53.38 0 50989..52320 + 443 170681587 - EcSMS35_0047 - major facilitator family transporter 48 54.80 0 52428..52958 + 176 170679681 kefF EcSMS35_0048 - glutathione-regulated potassium-efflux system ancillary protein kefF 49 55.77 0 52951..54813 + 620 170680033 kefC EcSMS35_0049 - glutathione-regulated potassium-efflux system protein KefC 50 50.76 0 54894..55484 + 196 170680741 folA EcSMS35_0050 - dihydrofolate reductase 51 43.78 -1 55801..56250 - 149 170683412 - EcSMS35_0051 - hypothetical protein 52 45.17 0 56286..56885 - 199 170684105 - EcSMS35_0052 - hypothetical protein 53 56.54 +1 56910..57758 - 282 170681134 - EcSMS35_0053 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 54 51.85 0 57765..58142 - 125 170681872 apaG EcSMS35_0054 - protein ApaG 55 53.65 0 58145..58966 - 273 170683255 ksgA EcSMS35_0055 - dimethyladenosine transferase 56 56.36 +1 58963..59952 - 329 170683725 pdxA EcSMS35_0056 - 4-hydroxythreonine-4-phosphate dehydrogenase 57 53.77 0 59952..61238 - 428 170682162 surA EcSMS35_0057 - chaperone/peptidyl-prolyl cis-trans isomerase SurA 58 50.98 0 61291..63648 - 785 170681284 imp EcSMS35_0058 - LPS-assembly protein 59 53.06 0 63903..64718 + 271 170681787 djlA EcSMS35_0059 - DnaJ family protein DjlA 60 53.48 0 64836..65495 - 219 170679993 - EcSMS35_0060 - RluA family pseudouridine synthase 61 55.07 0 65507..68413 - 968 170680507 rapA EcSMS35_0061 - RNA polymerase associated protein RapA 62 55.65 0 68577..70928 - 783 170683863 polB EcSMS35_0062 - DNA polymerase II 63 54.60 0 71003..71698 - 231 170683189 araD EcSMS35_0063 - L-ribulose-5-phosphate 4-epimerase 64 55.22 0 71898..73400 - 500 170682791 araA EcSMS35_0064 - L-arabinose isomerase 65 58.14 +1 73411..75111 - 566 170683895 araB EcSMS35_0065 - L-ribulokinase 66 52.84 0 75450..76295 + 281 170683703 araC EcSMS35_0066 - arabinose operon regulatory protein 67 33.69 -2 76809..77657 + 282 170679653 - EcSMS35_0067 - hypothetical protein 68 30.73 -2 77664..78086 + 140 170681643 - EcSMS35_0068 - hypothetical protein 69 54.38 0 78241..79005 + 254 170681148 - EcSMS35_0069 - hypothetical protein 70 56.37 +1 79075..79773 - 232 170680825 thiQ EcSMS35_0070 - thiamine ABC transporter, ATP-binding protein 71 57.67 +1 79757..81367 - 536 170682672 thiP EcSMS35_0071 - thiamine/thiamine pyrophosphate ABC transporter, permease protein 72 53.15 0 81343..82326 - 327 170682457 thiB EcSMS35_0072 - thiamin/thiamin pyrophosphate ABC transporter, periplasmic thiamin/thiamin pyrophospate-binding protein 73 43.27 -1 82784..83266 + 160 170681784 - EcSMS35_0073 - hypothetical protein 74 55.58 0 83496..85154 - 552 170681588 sgrR EcSMS35_0074 - sugar transport-related sRNA regulator SgrR 75 46.97 0 85243..85374 + 43 170680796 - EcSMS35_0075 - hypothetical protein 76 52.15 0 85482..86087 - 201 170682967 leuD EcSMS35_0076 - 3-isopropylmalate dehydratase, small subunit 77 55.82 0 86098..87498 - 466 170682290 leuC EcSMS35_0077 - 3-isopropylmalate dehydratase, large subunit 78 54.95 0 87501..88592 - 363 170684236 leuB EcSMS35_0078 - 3-isopropylmalate dehydrogenase 79 52.74 0 88592..90163 - 523 170683572 leuA EcSMS35_0079 - 2-isopropylmalate synthase 80 41.67 -1 90380..90511 - 43 170680253 - EcSMS35_0080 - hypothetical protein 81 45.82 0 91001..91945 + 314 170679841 leuO EcSMS35_0081 - transcriptional regulator LeuO 82 25.20 -2 91981..92103 - 40 170681517 - EcSMS35_0082 - hypothetical protein 83 53.06 0 92173..93987 + 604 170683042 ilvI EcSMS35_0083 - acetolactate synthase, large subunit, isozyme III 84 49.62 0 93960..94481 + 173 170682993 ilvH EcSMS35_0084 - acetolactate synthase, small subunit, isozyme III 85 55.02 0 94661..95665 + 334 170683499 fruR EcSMS35_0085 - fructose repressor 86 52.29 0 96267..96725 + 152 170684017 mraZ EcSMS35_0086 - MraZ protein 87 55.10 0 96727..97668 + 313 170679711 mraW EcSMS35_0087 - S-adenosyl-methyltransferase MraW 88 50.00 0 97665..98030 + 121 170680807 ftsL EcSMS35_0088 - cell division protein FtsL 89 53.82 0 98046..99812 + 588 170681597 ftsI EcSMS35_0089 - peptidoglycan synthetase FtsI 90 56.65 +1 99799..101286 + 495 170682313 murE EcSMS35_0090 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 91 54.67 0 101283..102641 + 452 170682834 murF EcSMS35_0091 - UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 92 53.09 0 102635..103717 + 360 170684044 mraY EcSMS35_0092 - phospho-N-acetylmuramoyl-pentapeptide-transferase 93 54.90 0 103720..105036 + 438 170681706 murD EcSMS35_0093 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 94 52.69 0 105036..106280 + 414 170682663 ftsW EcSMS35_0094 - cell division protein FtsW 95 55.71 0 106277..107344 + 355 170683320 murG EcSMS35_0095 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 96 54.54 0 107398..108873 + 491 170683694 murC EcSMS35_0096 - UDP-N-acetylmuramate--alanine ligase 97 51.36 0 108866..109786 + 306 170683837 ddlB EcSMS35_0097 - D-alanine--D-alanine ligase B 98 53.19 0 109788..110618 + 276 170680072 ftsQ EcSMS35_0098 - cell division protein FtsQ 99 52.26 0 110615..111877 + 420 170680487 ftsA EcSMS35_0099 - cell division protein FtsA 100 53.91 0 111939..113090 + 383 170681165 ftsZ EcSMS35_0100 - cell division protein FtsZ 50.50 MEAN 5.49 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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