version 1.0
Synechococcus sp. WH 7803, complete genome - 1..2366980 2533 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 61.45 0 174..1343 + 389 148238337 dnaN SynWH7803_0001 - DNA polymerase III subunit beta 2 63.20 0 1347..2096 + 249 148238338 - SynWH7803_0002 - RNA metabolism-related protein 3 63.93 0 2187..4484 + 765 148238339 purL SynWH7803_0003 - phosphoribosylformylglycinamidine synthase II 4 60.05 0 4523..5989 + 488 148238340 purF SynWH7803_0004 - amidophosphoribosyltransferase 5 62.69 0 5992..8457 - 821 148238341 gyrA SynWH7803_0005 - DNA gyrase/topoisomerase IV, subunit A 6 61.32 0 8547..9443 - 298 148238342 - SynWH7803_0006 - secreted tetratricopeptide protein 7 64.28 0 9459..10421 - 320 148238343 - SynWH7803_0007 - hypothetical protein 8 60.00 0 10463..11122 + 219 148238344 - SynWH7803_0008 - hypothetical protein 9 56.81 0 11139..11909 + 256 148238345 - SynWH7803_0009 - hypothetical protein 10 59.08 0 11928..12560 + 210 148238346 nusB SynWH7803_0010 - transcription antitermination protein NusB 11 62.37 0 12566..14032 + 488 148238347 ftsY SynWH7803_0011 - Signal recognition particle GTPase, FtsY 12 61.64 0 14107..15519 + 470 148238348 rsbU SynWH7803_0012 - Serine phosphatase RsbU, regulator of sigma subunit 13 59.66 0 15551..16963 + 470 148238349 argH SynWH7803_0013 - argininosuccinate lyase 14 68.27 +1 17083..17706 + 207 148238350 - SynWH7803_0014 - RNA-binding protein 15 64.88 0 17725..18729 - 334 148238351 dusA SynWH7803_0015 - tRNA-dihydrouridine synthase A 16 60.69 0 18790..19308 + 172 148238352 msrB SynWH7803_0016 - peptide methionine sulfoxide reductase 17 65.75 +1 19343..20539 + 398 148238353 - SynWH7803_0017 - flavoprotein 18 51.68 -1 20602..23637 - 1011 148238354 - SynWH7803_0018 - hypothetical protein 19 58.98 0 24364..25599 - 411 148238355 - SynWH7803_0019 - Type II secretory pathway, component PulF 20 59.78 0 25800..26873 - 357 148238356 pilT SynWH7803_0020 - Tfp pilus assembly protein, pilus retraction ATPase PilT 21 62.28 0 26884..28569 - 561 148238357 - SynWH7803_0021 - Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 22 62.93 0 28665..29387 + 240 148238358 grpE SynWH7803_0022 - molecular chaperone GrpE, heat shock protein 23 64.01 0 29438..30568 + 376 148238359 - SynWH7803_0023 - DnaJ-class molecular chaperone 24 65.02 0 30571..30813 + 80 148238360 - SynWH7803_0024 - hypothetical protein 25 65.79 +1 30806..31714 + 302 148238361 engC SynWH7803_0025 - GTPase engC 26 60.82 0 31689..32030 - 113 148238362 - SynWH7803_0026 - hypothetical protein 27 64.20 0 32055..32987 - 310 148238363 murB SynWH7803_0027 - UDP-N-acetylmuramate dehydrogenase 28 60.51 0 32963..34423 - 486 148238364 murC SynWH7803_0028 - UDP-N-acetylmuramate-alanine ligase 29 59.26 0 34586..35611 + 341 148238365 gap1 SynWH7803_0029 - glyceraldehyde-3-phosphate dehydrogenase 30 65.45 +1 35675..36661 - 328 148238366 thiL SynWH7803_0030 - thiamine monophosphate kinase 31 60.77 0 36668..37786 - 372 148238367 - SynWH7803_0031 - peptidyl-prolyl cis-trans isomerase 32 57.98 0 37819..38382 + 187 148238368 efp SynWH7803_0032 - elongation factor P 33 59.79 0 38385..38864 + 159 148238369 accB SynWH7803_0033 - biotin carboxyl carrier protein of acetyl-CoA carboxylase 34 62.88 0 38851..39879 - 342 148238370 pdxA SynWH7803_0034 - 4-hydroxythreonine-4-phosphate dehydrogenase 35 58.33 0 39878..40069 + 63 148238371 - SynWH7803_0035 - hypothetical protein 36 65.26 +1 40035..40961 - 308 148238372 wcaG SynWH7803_0036 - nucleoside-diphosphate-sugar epimerase 37 66.67 +1 41034..41228 + 64 148238373 - SynWH7803_0037 - hypothetical protein 38 54.02 -1 41229..41663 - 144 148238374 - SynWH7803_0038 - McrA/HNH family nuclease 39 64.88 0 41916..43424 + 502 148238375 hepA SynWH7803_0039 - SNF2 family DNA/RNA helicase 40 60.31 0 43379..43771 - 130 148238376 - SynWH7803_0040 - hypothetical protein 41 61.98 0 43771..44175 - 134 148238377 - SynWH7803_0041 - hypothetical protein 42 65.32 +1 44239..44757 - 172 148238378 - SynWH7803_0042 - hypothetical protein 43 57.04 0 44887..45156 + 89 148238379 - SynWH7803_0043 - hypothetical protein 44 56.79 0 45279..45440 + 53 148238380 - SynWH7803_0044 - hypothetical protein 45 56.50 0 45605..45781 + 58 148238381 - SynWH7803_0045 - hypothetical protein 46 62.69 0 45936..47066 - 376 148238382 - SynWH7803_0046 - DHSS soluble hydrogenase, small subunit 47 65.39 +1 47188..48285 + 365 148238383 cbiD SynWH7803_0047 - cobalt-precorrin-6A synthase 48 60.25 0 48299..49918 + 539 148238384 guaA SynWH7803_0048 - bifunctional GMP synthase/glutamine amidotransferase protein 49 60.03 0 49961..50593 + 210 148238385 - SynWH7803_0049 - hypothetical protein 50 64.29 0 50612..50989 + 125 148238386 - SynWH7803_0050 - hypothetical protein 51 63.53 0 50994..52808 + 604 148238387 - SynWH7803_0051 - cell division protein FtsI / penicillin-binding protein 2 52 64.75 0 52818..53966 - 382 148238388 - SynWH7803_0052 - glycosyltransferase of family alpha-mannosyltransferase 53 61.89 0 53980..55173 - 397 148238389 - SynWH7803_0053 - sulfolipid biosynthesis protein (UDP-sulfoquinovose synthase) 54 60.71 0 55232..55399 - 55 148238390 - SynWH7803_0054 - HLIP family protein 55 64.58 0 55500..56312 - 270 148238391 thiG SynWH7803_0055 - thiazole synthase 56 62.50 0 56426..56929 + 167 148238392 - SynWH7803_0056 - hypothetical protein 57 60.61 0 56897..57490 - 197 148238393 - SynWH7803_0057 - TPR repeat-containing protein 58 61.78 0 57525..57872 - 115 148238394 rplT SynWH7803_0058 - 50S ribosomal protein L20 59 62.12 0 57916..58113 - 65 148238395 rpmI SynWH7803_0059 - 50S ribosomal protein L35 60 68.50 +1 58173..59750 + 525 148238396 - SynWH7803_0060 - SpoIID sporulation protein 61 64.42 0 59781..61115 + 444 148238397 - SynWH7803_0061 - glycosyl transferase family protein 62 67.74 +1 61131..62996 - 621 148238398 dnaX SynWH7803_0062 - DNA polymerase III gamma/tau subunit 63 66.96 +1 63024..63698 - 224 148238399 - SynWH7803_0063 - hypothetical protein 64 62.39 0 63703..65058 - 451 148238400 clpX SynWH7803_0064 - ATP-dependent protease ATP-binding subunit 65 63.48 0 65425..66303 + 292 148238401 - SynWH7803_0065 - hypothetical protein 66 62.15 0 66313..67197 + 294 148238402 - SynWH7803_0066 - hypothetical protein 67 67.22 +1 67241..68863 + 540 148238403 - SynWH7803_0067 - monoamine oxidase 68 66.75 +1 68830..70071 - 413 148238404 - SynWH7803_0068 - hypothetical protein 69 61.95 0 70114..70749 + 211 148238405 - SynWH7803_0069 - hypothetical protein 70 62.46 0 70751..71440 - 229 148238406 clpP SynWH7803_0070 - protease subunit of ATP-dependent Clp protease 71 64.45 0 71487..72932 - 481 148238407 tig SynWH7803_0071 - trigger factor 72 64.24 0 73098..74126 + 342 148238408 asd SynWH7803_0072 - aspartate-semialdehyde dehydrogenase 73 64.91 0 74133..75041 + 302 148238409 dapA SynWH7803_0073 - dihydrodipicolinate synthase 74 65.30 +1 75108..77150 + 680 148238410 - SynWH7803_0074 - metallo-beta-lactamase superfamily hydrolase 75 64.71 0 77153..77818 - 221 148238411 - SynWH7803_0075 - hypothetical protein 76 68.28 +1 77824..78876 - 350 148238412 mesJ SynWH7803_0076 - tRNA(Ile)-lysidine synthase 77 69.76 +1 78916..79692 + 258 148238413 - SynWH7803_0077 - hypothetical protein 78 64.60 0 79755..80141 + 128 148238414 - SynWH7803_0078 - hypothetical protein 79 67.96 +1 80134..80676 + 180 148238415 - SynWH7803_0079 - hypothetical protein 80 61.95 0 80713..82749 + 678 148238416 uvrB SynWH7803_0080 - excinuclease ABC subunit B 81 69.05 +1 82767..84569 - 600 148238417 lysC SynWH7803_0081 - aspartate kinase 82 67.38 +1 84625..85605 - 326 148238418 holA SynWH7803_0082 - DNA polymerase III subunit delta 83 71.23 +2 85674..86309 + 211 148238419 cobH SynWH7803_0083 - precorrin-8X methylmutase 84 69.01 +1 86294..89026 - 910 148238420 mutS SynWH7803_0084 - DNA mismatch repair protein 85 46.15 -2 89122..90003 - 293 148238421 - SynWH7803_0085 - hypothetical protein 86 64.70 0 90026..90940 - 304 148238422 - SynWH7803_0086 - hypothetical protein 87 60.32 0 91067..91255 + 62 148238423 psbZ SynWH7803_0087 - photosystem II reaction center protein Z 88 60.08 0 91288..91773 + 161 148238424 ribH SynWH7803_0088 - riboflavin synthase subunit beta 89 37.97 -2 91897..93081 + 394 148238425 - SynWH7803_0089 - hypothetical protein 90 38.81 -2 93071..93910 - 279 148238426 - SynWH7803_0090 - glycosyltransferase 91 39.77 -2 93911..94438 - 175 148238427 - SynWH7803_0091 - hypothetical protein 92 42.23 -2 94448..95503 - 351 148238428 galE SynWH7803_0092 - UDP-glucose-4-epimerase 93 32.85 -2 95561..96175 - 204 148238429 - SynWH7803_0093 - hypothetical protein 94 33.20 -2 96399..97148 - 249 148238430 - SynWH7803_0094 - hypothetical protein 95 33.23 -2 97155..98078 - 307 148238431 - SynWH7803_0095 - hypothetical protein 96 34.26 -2 98537..99292 - 251 148238432 - SynWH7803_0096 - hypothetical protein 97 37.76 -2 100017..100739 - 240 148238433 - SynWH7803_0097 - hypothetical protein 98 66.67 +1 101009..101464 - 151 148238434 - SynWH7803_0098 - acetyltransferase 99 67.77 +1 101493..102401 - 302 148238435 - SynWH7803_0099 - hypothetical protein 100 67.27 +1 102513..102677 + 54 148238436 - SynWH7803_0100 - hypothetical protein 60.32 MEAN 4.87 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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