IslandPath Analysis: Mycoplasma gallisepticum R



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 31.67   STD DEV: 3.23
Mycoplasma gallisepticum R, complete genome - 1..996422
726 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1	 28.16	-1	1890..2681	+	263	31544205	parA	MGA_0619	-	ParA/Soj
2	 26.58	-1	2659..3147	+	162	31544206	-	MGA_0621	-	hypothetical protein
3	 27.71	-1	3163..4548	+	461	31544207	dnaA	MGA_0622	-	DnaA
4	 32.56	0	4744..5133	+	129	31544208	-	MGA_1322d	-	ABC transporter component
5	 30.27	0	5130..6077	+	315	31544209	-	MGA_0625	-	MdlB-like
6	 32.45	0	6369..8294	+	641	31544210	-	MGA_0626	-	MdlB-like
7	 38.67	+2	8389..8538	+	49	31544211	rpL34	MGA_1323d	-	RpL34
8	 25.64	-1	8535..8924	+	129	31544212	rnpA	MGA_0630	-	hypothetical protein
9	 34.81	0	8929..10080	+	383	31544213	yidC	MGA_0631	-	putative inner membrane protein translocase component YidC
10	 29.14	0	10077..10886	+	269	31544214	ksgA	MGA_0633	-	dimethyladenosine transferase
11	 29.26	0	10801..11586	+	261	31544215	-	MGA_0635	-	hypothetical protein
12	 29.89	0	11593..13248	+	551	31544216	argS	MGA_0636	-	hypothetical protein
13	 32.01	0	13218..14426	+	402	31544217	mnuA	MGA_0637	-	MnuA
14	 34.69	0	14481..15215	-	244	31544218	glpF	MGA_0641	-	hypothetical protein
15	 34.37	0	15212..16753	-	513	31544219	glpK	MGA_0644	-	glycerol kinase
16	 33.91	0	16777..17997	-	406	31544220	-	MGA_0646	-	glycerol 3-P dehydrogenase
17	 33.64	0	18210..20486	-	758	31544221	-	MGA_0648	-	lipoprotein
18	 33.14	0	20691..21203	-	170	31544222	-	MGA_0649	-	hypothetical protein
19	 31.16	0	21317..22144	+	275	31544223	-	MGA_0650	-	hypothetical protein
20	 35.95	+1	22141..23862	-	573	31544224	-	MGA_0652	-	hydrolase
21	 32.77	0	24273..28358	+	1361	31544225	-	MGA_0654	-	hypothetical protein
22	 32.87	0	28362..29861	+	499	31544226	phnL	MGA_0655	-	hypothetical protein
23	 35.29	+1	30232..30948	+	238	31544227	-	MGA_0656	-	lipoprotein
24	 32.91	0	31416..31889	+	157	31544228	-	MGA_0657	-	hypothetical protein
25	 32.24	0	31893..32441	+	182	31544229	hpt	MGA_0658	-	Hpt hypoxanthine-guanine phosphoribosyltransferase
26	 36.80	+1	32458..34764	+	768	31544230	ftsH	MGA_0659	-	hypothetical protein
27	 28.90	0	34780..35433	+	217	31544231	-	MGA_0661	-	hypothetical protein
28	 26.67	-1	35414..36313	+	299	31544232	-	MGA_0662	-	hypothetical protein
29	 30.80	0	36362..36637	+	91	31544233	fruB	MGA_0664	-	hypothetical protein
30	 34.03	0	36690..38690	+	666	31544234	tktA	MGA_0666	-	hypothetical protein
31	 36.25	+1	38680..41352	+	890	31544235	secA	MGA_0670	-	preprotein translocase subunit SecA
32	 34.26	0	41618..43873	+	751	31544236	-	MGA_0674	-	hypothetical protein
33	 34.78	0	43938..44768	+	276	31544237	-	MGA_0676	-	hypothetical protein
34	 32.37	0	44802..46565	+	587	31544238	-	MGA_0677	-	ABC transporter ATP-binding protein
35	 32.33	0	46565..47557	+	330	31544239	malF	MGA_0680	-	hypothetical protein
36	 32.52	0	47532..48509	+	325	31544240	malG	MGA_0682	-	hypothetical protein
37	 30.25	0	48701..49672	+	323	31544241	-	MGA_0683	-	MgpA-like
38	 31.12	0	50461..52587	+	708	31544242	uvrB	MGA_0686	-	excinuclease ABC subunit B
39	 32.12	0	52632..53789	+	385	31544243	pstS	MGA_0687	-	hypothetical protein
40	 31.51	0	53771..55747	+	658	31544244	-	MGA_0689	-	phosphate transport system permease
41	 32.52	0	55737..56717	+	326	31544245	pstB	MGA_0693	-	hypothetical protein
42	 27.73	-1	56693..57406	+	237	31544246	phoU	MGA_0694	-	hypothetical protein
43	 34.21	0	57481..59649	-	722	31544247	nrdA	MGA_0695	-	ribonucleotide-diphosphate reductase subunit alpha
44	 37.58	+1	59746..60216	-	156	31544248	nrdI	MGA_0696	-	ribonucleotide reductase stimulatory protein
45	 34.22	0	60204..61223	-	339	31544249	nrdF	MGA_0698	-	ribonucleotide-diphosphate reductase subunit beta
46	 33.22	0	61769..62638	+	289	31544250	thyA	MGA_0699	-	thymidylate synthase
47	 30.39	0	62572..63591	+	339	31544251	FolA	MGA_0701	-	hypothetical protein
48	 25.00	-2	63623..63826	-	67	31544252	-	MGA_0702	-	hypothetical protein
49	 32.88	0	65212..66093	-	293	31544253	-	MGA_0704	-	hypothetical protein
50	 29.92	0	66331..66711	+	126	31544254	rpsJ	MGA_0705	-	30S ribosomal protein S10
51	 36.01	+1	66743..67453	+	236	31544255	rplC	MGA_0707	-	50S ribosomal protein L3
52	 32.06	0	67480..68109	+	209	161511519	rplD	MGA_0710	-	50S ribosomal protein L4
53	 34.56	0	68112..68438	+	108	161511518	rplW	MGA_0711	-	50S ribosomal protein L23
54	 38.38	+2	68485..69336	+	283	31544258	rplB	MGA_0712	-	50S ribosomal protein L2
55	 31.44	0	69357..69620	+	87	31544259	rpsS	MGA_0714	-	30S ribosomal protein S19
56	 31.49	0	69631..70065	+	144	31544260	rplV	MGA_0716	-	50S ribosomal protein L22
57	 36.11	+1	70068..70859	+	263	161511517	rpsC	MGA_0717	-	30S ribosomal protein S3
58	 37.89	+1	70865..71281	+	138	31544262	rplP	MGA_0721	-	50S ribosomal protein L16
59	 28.39	-1	71278..71742	+	154	31544263	rpmC	MGA_0723	-	50S ribosomal protein L29
60	 36.05	+1	71748..72005	+	85	31544264	rpsQ	MGA_0725	-	hypothetical protein
61	 37.87	+1	72033..72407	+	124	161511516	rplN	MGA_0726	-	50S ribosomal protein L14
62	 34.55	0	72418..72747	+	109	31544266	rplX	MGA_0728	-	hypothetical protein
63	 34.40	0	72744..73304	+	186	31544267	rplE	MGA_0729	-	50S ribosomal protein L5
64	 37.20	+1	73276..73482	+	68	31544268	rpsN	MGA_0732	-	RpsN
65	 33.33	0	73506..73907	+	133	31544269	rpsH	MGA_0733	-	30S ribosomal protein S8
66	 33.88	0	73926..74477	+	183	31544270	rplF	MGA_0734	-	50S ribosomal protein L6
67	 37.50	+1	74484..74843	+	119	31544271	rplR	MGA_0735	-	50S ribosomal protein L18
68	 36.99	+1	74854..75537	+	227	31544272	rpsE	MGA_0737	-	30S ribosomal protein S5
69	 33.56	0	75553..75996	+	147	161511515	rplO	MGA_0739	-	50S ribosomal protein L15
70	 36.21	+1	76009..77505	+	498	31544274	secY	MGA_0740	-	preprotein translocase subunit SecY
71	 33.18	0	77481..78143	+	220	31544275	adk	MGA_0743	-	hypothetical protein
72	 32.40	0	78154..78906	+	250	31544276	map	MGA_0745	-	hypothetical protein
73	 35.60	+1	79087..80058	+	323	31544277	mdh	MGA_0746	-	hypothetical protein
74	 28.65	0	83639..87079	-	1146	31544278	-	MGA_0754	-	hypothetical protein
75	 33.00	0	87070..88560	+	496	31544279	lysU	MGA_0753	-	hypothetical protein
76	 34.13	0	88597..89727	+	376	31544280	dnaJ	MGA_1324d	-	hypothetical protein
77	 29.33	0	89748..90497	+	249	31544281	-	MGA_0758	-	hypothetical protein
78	 34.56	0	90656..91714	+	352	31544282	-	MGA_0760	-	hypothetical protein
79	 28.19	-1	91691..92506	-	271	31544283	-	MGA_0762	-	hypothetical protein
80	 34.08	0	92584..94329	+	581	31544284	ptsA	MGA_0763	-	hypothetical protein
81	 28.23	-1	94407..94955	+	182	31544285	-	MGA_0765	-	hypothetical protein
82	 28.94	0	95390..95662	+	90	31544286	rpsO	MGA_0766	-	30S ribosomal protein S15
83	 32.05	0	95678..97474	+	598	31544287	-	MGA_0768	-	hypothetical protein
84	 30.44	0	97482..99449	+	655	31544288	ftsK	MGA_0771	-	hypothetical protein
85	 32.42	0	99453..99782	+	109	31544289	trxA	MGA_0774	-	hypothetical protein
86	 28.02	-1	99791..102406	+	871	31544290	-	MGA_0777	-	hypothetical protein
87	 35.01	+1	102400..105264	+	954	31544291	uvrA	MGA_0778	-	excinuclease ABC subunit A
88	 33.90	0	105312..106190	+	292	161511514	tsf	MGA_0782	-	elongation factor Ts
89	 32.65	0	106196..106924	+	242	31544293	pyrH	MGA_0783	-	hypothetical protein
90	 30.66	0	106928..107488	+	186	31544294	frr	MGA_0784	-	hypothetical protein
91	 30.33	0	107476..108606	+	376	31544295	cdsA	MGA_0785	-	hypothetical protein
92	 30.80	0	108611..109717	+	368	31544296	dxr	MGA_0787	-	1-deoxy-D-xylulose 5-phosphate reductoisomerase
93	 36.37	+1	109714..110535	+	273	31544297	-	MGA_0789	-	protease
94	 30.78	0	110537..115042	+	1501	31544298	polC	MGA_0791	-	hypothetical protein
95	 31.60	0	115046..118444	+	1132	31544299	uvrD	MGA_0793	-	hypothetical protein
96	 27.94	-1	119199..120680	-	493	31544300	-	MGA_0797	-	hypothetical protein
97	 28.96	0	120695..122638	-	647	31544301	-	MGA_0798	-	AprE-like
98	 28.05	-1	122995..124470	-	491	31544302	-	MGA_0800	-	hypothetical protein
99	 27.96	-1	124460..125743	-	427	31544303	-	MGA_0801	-	AprE-like
100	 27.76	-1	125683..126453	-	256	31544304	-	MGA_0802	-	hypothetical protein
31.67	MEAN

3.23	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.