version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 925 46.51 0 1074720..1075721 - 333 145598248 oppD YPDSF_0951 - oligopeptide transporter ATP-binding component 926 47.02 0 1075733..1076638 - 301 145598249 - YPDSF_0952 - oligopeptide transport system permease protein 927 43.87 0 1076657..1077577 - 306 145598250 oppB YPDSF_0953 - oligopeptide transporter permease 928 42.74 -1 1077664..1079301 - 545 145598251 - YPDSF_0954 - periplasmic oligopeptide-binding protein precursor 929 45.27 0 1080138..1080782 - 214 145598252 - YPDSF_0955 - hypothetical protein 930 46.90 0 1081589..1084264 + 891 145598253 - YPDSF_0956 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase 931 45.85 0 1085015..1085605 - 196 145598254 - YPDSF_0957 - thymidine kinase 932 44.06 0 1086355..1086783 + 142 145598255 - YPDSF_0958 - global DNA-binding transcriptional dual regulator H-NS 933 49.55 0 1086795..1088003 - 402 145598256 - YPDSF_0959 - transposase for the IS285 insertion element 934 42.76 -1 1088520..1089866 - 448 145598257 - YPDSF_0960 - nucleotide sugar dehydrogenase 935 43.85 0 1090173..1091189 - 338 145598258 - YPDSF_0961 - response regulator of RpoS 936 47.53 0 1092523..1092987 + 154 145598259 - YPDSF_0962 - hypothetical protein 937 42.87 -1 1093071..1093919 + 282 145598260 purU YPDSF_0963 - formyltetrahydrofolate deformylase 938 49.55 0 1094556..1095764 + 402 145598261 - YPDSF_0964 - transposase for the IS285 insertion element 939 29.27 -2 1095983..1096843 - 286 145598262 - YPDSF_0965 - LysR family transcriptional regulator 940 47.58 0 1097653..1098459 + 268 145598263 - YPDSF_0966 - exonuclease III 941 54.01 +1 1098557..1098943 + 128 145598264 - YPDSF_0967 - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 942 43.64 0 1098956..1099246 - 96 145598265 - YPDSF_0968 - hypothetical protein 943 49.30 0 1099243..1101171 - 642 145598266 - YPDSF_0969 - DNA topoisomerase III 944 47.65 0 1101246..1102160 - 304 145598267 - YPDSF_0970 - selenide, water dikinase 945 50.72 0 1102385..1102936 - 183 145598268 - YPDSF_0971 - hypothetical protein 946 48.03 0 1103099..1104949 + 616 145598269 - YPDSF_0972 - protease 4 947 47.69 0 1105066..1106082 + 338 145598270 ansA YPDSF_0973 - cytoplasmic asparaginase I 948 49.69 0 1106097..1106744 + 215 145598271 - YPDSF_0974 - nicotinamidase/pyrazinamidase 949 44.27 0 1106878..1107252 - 124 145598272 - YPDSF_0975 - hypothetical protein 950 45.41 0 1107221..1107634 - 137 145598273 - YPDSF_0976 - methionine sulfoxide reductase B 951 47.49 0 1107982..1108977 + 331 145598274 - YPDSF_0977 - glyceraldehyde 3-phosphate dehydrogenase A 952 48.17 0 1109291..1110166 + 291 145598275 - YPDSF_0978 - hypothetical protein 953 46.56 0 1110239..1111009 - 256 145598276 - YPDSF_0979 - hypothetical protein 954 45.06 0 1111432..1113366 + 644 145598277 - YPDSF_0980 - hypothetical protein 955 48.00 0 1113516..1114790 + 424 145598278 - YPDSF_0981 - hypothetical protein 956 51.03 0 1114898..1116016 + 372 145598279 - YPDSF_0982 - membrane protein 957 53.53 +1 1116051..1116956 - 301 145598280 - YPDSF_0983 - LysR family transcriptional regulator 958 48.62 0 1117154..1118023 + 289 145598281 - YPDSF_0984 - hypothetical protein 959 50.04 0 1118288..1119490 + 400 145598282 - YPDSF_0985 - multidrug resistance protein 960 52.64 0 1119506..1120810 - 434 145598283 - YPDSF_0986 - D-amino acid dehydrogenase small subunit 961 44.47 0 1121276..1122811 + 511 145598284 - YPDSF_0987 - hypothetical protein 962 46.25 0 1123029..1123748 - 239 145598285 - YPDSF_0988 - fatty acid metabolism regulator 963 46.54 0 1123992..1125566 + 524 145598286 nhaB YPDSF_0989 - sodium/proton antiporter 964 45.79 0 1125787..1126332 + 181 145598287 - YPDSF_0990 - disulfide bond formation protein B 965 43.98 0 1126749..1127105 - 118 145598288 - YPDSF_0991 - hypothetical protein 966 51.82 0 1128197..1128937 + 246 145598289 - YPDSF_0992 - hypothetical protein 967 52.33 0 1128954..1130153 + 399 145598290 - YPDSF_0993 - aminotransferase 968 54.81 +1 1130157..1131101 + 314 145598291 - YPDSF_0994 - hypothetical protein 969 51.92 0 1131174..1131329 + 51 145598292 - YPDSF_0995 - hypothetical protein 970 51.28 0 1131588..1131743 - 51 145598293 - YPDSF_0996 - hypothetical protein 971 41.43 -1 1131740..1132159 - 139 145598294 - YPDSF_0997 - phage tail fiber assembly protein 972 44.34 0 1132170..1133087 - 305 145598295 - YPDSF_0998 - hypothetical protein 973 44.28 0 1133104..1134117 - 337 145598296 - YPDSF_0999 - hypothetical protein 974 47.63 0 1134102..1137305 - 1067 145598297 - YPDSF_1000 - phage host specificity protein 975 49.92 0 1137877..1138497 - 206 145598298 - YPDSF_1001 - phage tail assembly protein 976 37.32 -2 1138911..1139462 - 183 145598299 - YPDSF_1002 - phage-related membrane protein 977 45.04 0 1139561..1140568 - 335 145598300 - YPDSF_1003 - hypothetical protein 978 40.56 -1 1140825..1141364 + 179 145598301 - YPDSF_1004 - phage regulatory protein 979 42.71 -1 1141443..1141634 - 63 145598302 - YPDSF_1005 - hypothetical protein 980 52.46 0 1142347..1143057 - 236 145598303 - YPDSF_1006 - phage minor tail protein 981 50.60 0 1143060..1143812 - 250 145598304 - YPDSF_1007 - hypothetical protein 982 45.97 0 1143932..1144390 - 152 145598305 - YPDSF_1008 - transposase for the IS1541 insertion element 983 45.75 0 1144642..1145100 - 152 145598306 - YPDSF_1009 - transposase for the IS1541 insertion element 984 52.92 +1 1145406..1145747 - 113 145598307 - YPDSF_1010 - hypothetical protein 985 46.67 0 1145750..1149265 - 1171 145598308 - YPDSF_1011 - phage tail protein 986 46.47 0 1149574..1149885 - 103 145598309 - YPDSF_1012 - hypothetical protein 987 50.05 0 1149898..1150818 - 306 145598310 - YPDSF_1013 - hypothetical protein 988 44.36 0 1150884..1151291 - 135 145598311 - YPDSF_1014 - hypothetical protein 989 46.32 0 1151288..1151872 - 194 145598312 - YPDSF_1015 - hypothetical protein 990 48.48 0 1151874..1152170 - 98 145598313 - YPDSF_1016 - hypothetical protein 991 41.57 -1 1152227..1152481 - 84 145598314 - YPDSF_1017 - hypothetical protein 992 46.52 0 1152478..1153008 - 176 145598315 - YPDSF_1018 - hypothetical protein 993 49.42 0 1153008..1154213 - 401 145598316 - YPDSF_1019 - hypothetical protein 994 50.78 0 1154227..1155000 - 257 145598317 - YPDSF_1020 - hypothetical protein 995 49.06 0 1155122..1156234 - 370 145598318 - YPDSF_1021 - hypothetical protein 996 50.78 0 1156235..1156876 - 213 145598319 - YPDSF_1022 - hypothetical protein 997 48.15 0 1156895..1157623 - 242 145598320 - YPDSF_1023 - hypothetical protein 998 48.29 0 1157623..1159113 - 496 145598321 - YPDSF_1024 - hypothetical protein 999 47.33 0 1159123..1159572 - 149 145598322 - YPDSF_1025 - hypothetical protein 1000 47.96 0 1159603..1160238 - 211 145598323 - YPDSF_1026 - hypothetical protein 1001 47.76 0 1160695..1161408 - 237 145598324 - YPDSF_1027 - phage regulatory protein 1002 50.76 0 1161954..1162412 - 152 145598325 - YPDSF_1028 - prophage endopeptidase 1003 51.07 0 1162397..1162909 - 170 145598326 - YPDSF_1029 - phage lysozyme 1004 45.98 0 1163655..1163828 - 57 145598327 - YPDSF_1030 - hypothetical protein 1005 42.91 -1 1164288..1164851 - 187 145598328 - YPDSF_1031 - hypothetical protein 1006 43.85 0 1165122..1165511 - 129 145598329 - YPDSF_1032 - phage antitermination protein 1007 47.03 0 1165512..1166117 - 201 145598330 - YPDSF_1033 - hypothetical protein 1008 50.56 0 1166191..1166637 - 148 145598331 - YPDSF_1034 - hypothetical protein 1009 50.23 0 1166718..1167362 + 214 145598332 - YPDSF_1035 - methyltransferase 1010 50.38 0 1168090..1168869 - 259 145598333 - YPDSF_1036 - transposase/IS protein 1011 52.79 0 1168869..1169891 - 340 145598334 - YPDSF_1037 - transposase for insertion sequence IS100 1012 49.07 0 1169961..1171199 + 412 145598335 - YPDSF_1038 - hypothetical protein 1013 44.07 0 1171226..1171672 - 148 145598336 - YPDSF_1039 - hypothetical protein 1014 47.34 0 1171775..1172431 - 218 145598337 - YPDSF_1040 - hypothetical protein 1015 46.59 0 1172502..1173587 - 361 145598338 - YPDSF_1041 - lipoprotein 1016 43.59 0 1173728..1174000 - 90 145598339 - YPDSF_1042 - hypothetical protein 1017 47.60 0 1174721..1175407 + 228 145598340 minC YPDSF_1043 - septum formation inhibitor 1018 46.86 0 1175432..1176244 + 270 145598341 - YPDSF_1044 - cell division inhibitor MinD 1019 44.81 0 1176248..1176517 + 89 145598342 minE YPDSF_1045 - cell division topological specificity factor MinE 1020 47.72 0 1176754..1177914 - 386 145598343 - YPDSF_1046 - ribonuclease D 1021 48.32 0 1178035..1179756 - 573 145598344 - YPDSF_1047 - long-chain-fatty-acid--CoA ligase 1022 54.94 +1 1181103..1181801 - 232 145598345 - YPDSF_1050 - hypothetical protein 1023 50.66 0 1181873..1183777 - 634 145598346 - YPDSF_1051 - DEAD box family helicase 1024 48.70 0 1183908..1184252 + 114 145598347 - YPDSF_1052 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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