version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 864 52.72 0 1013534..1014157 + 207 145598187 - YPDSF_0890 - electron transport complex protein RnfB 865 51.60 0 1014150..1015895 + 581 145598188 - YPDSF_0891 - electron transport complex protein RnfC 866 43.29 0 1016000..1016893 - 297 145598189 - YPDSF_0892 - AraC family transcription regulator 867 50.68 0 1017382..1018476 + 364 145598190 rnfD YPDSF_0893 - electron transport complex protein RnfD 868 49.52 0 1018486..1019115 + 209 145598191 - YPDSF_0894 - electron transport complex protein RnfG 869 49.72 0 1019112..1019813 + 233 145598192 - YPDSF_0895 - SoxR-reducing system protein RsxE 870 47.35 0 1019810..1020451 + 213 145598193 - YPDSF_0896 - endonuclease III 871 49.05 0 1020634..1021632 - 332 145598194 - YPDSF_0897 - hypothetical protein 872 47.44 0 1021670..1022980 - 436 145598195 - YPDSF_0898 - integral membrane protein 873 50.28 0 1023639..1025573 + 644 145598196 - YPDSF_0899 - exoribonuclease II 874 50.12 0 1025923..1027989 + 688 145598197 - YPDSF_0900 - carbon starvation protein A 875 56.36 +1 1027958..1028287 + 109 145598198 - YPDSF_0901 - hypothetical protein 876 49.56 0 1028404..1029192 - 262 145598199 - YPDSF_0902 - fructose-6-phosphate aldolase 877 42.57 -1 1029403..1029651 + 82 145598200 - YPDSF_0903 - hypothetical protein 878 49.86 0 1029680..1030375 - 231 145598201 araD YPDSF_0904 - L-ribulose-5-phosphate 4-epimerase 879 52.05 0 1030855..1031073 + 72 145598202 - YPDSF_0905 - osmotically inducible lipoprotein B precursor 880 47.71 0 1031288..1031614 - 108 145598203 - YPDSF_0906 - translation initiation factor Sui1 881 52.17 0 1031614..1032351 - 245 145598204 - YPDSF_0907 - orotidine 5'-phosphate decarboxylase 882 38.00 -2 1032821..1033120 + 99 145598205 - YPDSF_0908 - hypothetical protein 883 48.89 0 1033242..1034411 - 389 145598206 - YPDSF_0909 - hypothetical protein 884 46.47 0 1034418..1034729 - 103 145598207 - YPDSF_0910 - hypothetical protein 885 49.48 0 1034898..1035659 - 253 145598208 - YPDSF_0911 - phosphatidylglycerophosphatase B 886 46.60 0 1036153..1036755 + 200 145598209 ribA YPDSF_0912 - GTP cyclohydrolase II 887 48.90 0 1036919..1039591 - 890 145598210 - YPDSF_0913 - aconitate hydratase 888 34.27 -2 1039955..1040812 - 285 145598211 - YPDSF_0914 - hypothetical protein 889 46.56 0 1041148..1042122 - 324 145598212 cysB YPDSF_0915 - transcriptional regulator CysB 890 45.97 0 1042542..1043000 - 152 145598213 - YPDSF_0916 - transposase for the IS1541 insertion element 891 48.32 0 1043230..1045845 - 871 145598214 - YPDSF_0917 - DNA topoisomerase I 892 40.87 -1 1046264..1046515 + 83 145598215 - YPDSF_0918 - hypothetical protein 893 48.55 0 1046634..1047665 - 343 145598216 - YPDSF_0919 - putative periplasmic protease 894 52.10 0 1047852..1048613 + 253 145598217 - YPDSF_0920 - short chain dehydrogenase 895 49.61 0 1048576..1049220 + 214 145598218 - YPDSF_0921 - cob(I)yrinic acid a,c-diamide adenosyltransferase 896 51.01 0 1049343..1050377 - 344 145598219 - YPDSF_0922 - 23S rRNA pseudouridylate synthase B 897 46.05 0 1050724..1051344 - 206 145598220 - YPDSF_0923 - hypothetical protein 898 51.82 0 1051361..1052296 - 311 145598221 - YPDSF_0924 - hypothetical protein 899 50.51 0 1052712..1054277 + 521 145598222 - YPDSF_0925 - anthranilate synthase component I 900 51.99 0 1054277..1054855 + 192 145598223 - YPDSF_0926 - anthranilate synthase component II 901 53.25 +1 1054870..1055868 + 332 145598224 trpD YPDSF_0927 - anthranilate phosphoribosyltransferase 902 50.98 0 1055872..1057299 + 475 145598225 - YPDSF_0928 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 903 48.95 0 1057456..1058646 + 396 145598226 - YPDSF_0929 - tryptophan synthase subunit beta 904 50.19 0 1058646..1059452 + 268 145598227 trpA YPDSF_0930 - tryptophan synthase subunit alpha 905 37.33 -2 1059466..1059615 + 49 145598228 - YPDSF_0931 - hypothetical protein 906 46.03 0 1059795..1060109 + 104 145598229 - YPDSF_0932 - lipoprotein 907 45.99 0 1060256..1060903 - 215 145598230 - YPDSF_0933 - outer membrane protein W 908 37.50 -2 1061000..1061215 - 71 145598231 - YPDSF_0934 - hypothetical protein 909 45.01 0 1061377..1062147 + 256 145598232 - YPDSF_0935 - hypothetical protein 910 45.53 0 1062268..1062882 - 204 145598233 - YPDSF_0936 - sulfate permease family protein 911 49.22 0 1062914..1063996 - 360 145598234 - YPDSF_0937 - hypothetical protein 912 41.25 -1 1064227..1064769 + 180 145598235 - YPDSF_0938 - intracellular septation protein A 913 47.56 0 1064849..1065298 + 149 145598236 - YPDSF_0939 - acyl-CoA thioester hydrolase 914 49.63 0 1065446..1066654 + 402 145598237 - YPDSF_0940 - transposase for the IS285 insertion element 915 49.28 0 1066690..1067448 - 252 145598238 - YPDSF_0941 - transport protein TonB 916 47.47 0 1067749..1068045 + 98 145598239 - YPDSF_0942 - YciI-like protein 917 39.84 -1 1068268..1068513 + 81 145598240 - YPDSF_0943 - hypothetical protein 918 40.15 -1 1068629..1068892 - 87 145598241 - YPDSF_0944 - hypothetical protein 919 36.43 -2 1069010..1069138 - 42 145598242 - YPDSF_0945 - hypothetical protein 920 42.96 -1 1069113..1069652 - 179 145598243 - YPDSF_0946 - attachment invasion locus protein precursor 921 46.54 0 1070699..1072159 + 486 145598244 cls YPDSF_0947 - cardiolipin synthetase 922 44.35 0 1072294..1072647 + 117 145598245 - YPDSF_0948 - dsDNA-mimic protein 923 34.26 -2 1072946..1073161 - 71 145598246 - YPDSF_0949 - hypothetical protein 924 45.31 0 1073722..1074723 - 333 145598247 - YPDSF_0950 - oligopeptide transport ATP-binding protein 925 46.51 0 1074720..1075721 - 333 145598248 oppD YPDSF_0951 - oligopeptide transporter ATP-binding component 926 47.02 0 1075733..1076638 - 301 145598249 - YPDSF_0952 - oligopeptide transport system permease protein 927 43.87 0 1076657..1077577 - 306 145598250 oppB YPDSF_0953 - oligopeptide transporter permease 928 42.74 -1 1077664..1079301 - 545 145598251 - YPDSF_0954 - periplasmic oligopeptide-binding protein precursor 929 45.27 0 1080138..1080782 - 214 145598252 - YPDSF_0955 - hypothetical protein 930 46.90 0 1081589..1084264 + 891 145598253 - YPDSF_0956 - bifunctional acetaldehyde-CoA/alcohol dehydrogenase 931 45.85 0 1085015..1085605 - 196 145598254 - YPDSF_0957 - thymidine kinase 932 44.06 0 1086355..1086783 + 142 145598255 - YPDSF_0958 - global DNA-binding transcriptional dual regulator H-NS 933 49.55 0 1086795..1088003 - 402 145598256 - YPDSF_0959 - transposase for the IS285 insertion element 934 42.76 -1 1088520..1089866 - 448 145598257 - YPDSF_0960 - nucleotide sugar dehydrogenase 935 43.85 0 1090173..1091189 - 338 145598258 - YPDSF_0961 - response regulator of RpoS 936 47.53 0 1092523..1092987 + 154 145598259 - YPDSF_0962 - hypothetical protein 937 42.87 -1 1093071..1093919 + 282 145598260 purU YPDSF_0963 - formyltetrahydrofolate deformylase 938 49.55 0 1094556..1095764 + 402 145598261 - YPDSF_0964 - transposase for the IS285 insertion element 939 29.27 -2 1095983..1096843 - 286 145598262 - YPDSF_0965 - LysR family transcriptional regulator 940 47.58 0 1097653..1098459 + 268 145598263 - YPDSF_0966 - exonuclease III 941 54.01 +1 1098557..1098943 + 128 145598264 - YPDSF_0967 - pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 942 43.64 0 1098956..1099246 - 96 145598265 - YPDSF_0968 - hypothetical protein 943 49.30 0 1099243..1101171 - 642 145598266 - YPDSF_0969 - DNA topoisomerase III 944 47.65 0 1101246..1102160 - 304 145598267 - YPDSF_0970 - selenide, water dikinase 945 50.72 0 1102385..1102936 - 183 145598268 - YPDSF_0971 - hypothetical protein 946 48.03 0 1103099..1104949 + 616 145598269 - YPDSF_0972 - protease 4 947 47.69 0 1105066..1106082 + 338 145598270 ansA YPDSF_0973 - cytoplasmic asparaginase I 948 49.69 0 1106097..1106744 + 215 145598271 - YPDSF_0974 - nicotinamidase/pyrazinamidase 949 44.27 0 1106878..1107252 - 124 145598272 - YPDSF_0975 - hypothetical protein 950 45.41 0 1107221..1107634 - 137 145598273 - YPDSF_0976 - methionine sulfoxide reductase B 951 47.49 0 1107982..1108977 + 331 145598274 - YPDSF_0977 - glyceraldehyde 3-phosphate dehydrogenase A 952 48.17 0 1109291..1110166 + 291 145598275 - YPDSF_0978 - hypothetical protein 953 46.56 0 1110239..1111009 - 256 145598276 - YPDSF_0979 - hypothetical protein 954 45.06 0 1111432..1113366 + 644 145598277 - YPDSF_0980 - hypothetical protein 955 48.00 0 1113516..1114790 + 424 145598278 - YPDSF_0981 - hypothetical protein 956 51.03 0 1114898..1116016 + 372 145598279 - YPDSF_0982 - membrane protein 957 53.53 +1 1116051..1116956 - 301 145598280 - YPDSF_0983 - LysR family transcriptional regulator 958 48.62 0 1117154..1118023 + 289 145598281 - YPDSF_0984 - hypothetical protein 959 50.04 0 1118288..1119490 + 400 145598282 - YPDSF_0985 - multidrug resistance protein 960 52.64 0 1119506..1120810 - 434 145598283 - YPDSF_0986 - D-amino acid dehydrogenase small subunit 961 44.47 0 1121276..1122811 + 511 145598284 - YPDSF_0987 - hypothetical protein 962 46.25 0 1123029..1123748 - 239 145598285 - YPDSF_0988 - fatty acid metabolism regulator 963 46.54 0 1123992..1125566 + 524 145598286 nhaB YPDSF_0989 - sodium/proton antiporter 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.