version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 513 54.62 +1 588137..589207 - 356 145597836 - YPDSF_0528 - siderophore biosynthesis protein, IucA familly 514 50.41 0 589300..589908 - 202 145597837 - YPDSF_0529 - hypothetical protein 515 55.15 +1 590048..591271 + 407 145597838 - YPDSF_0530 - hypothetical protein 516 38.37 -2 591561..592394 - 277 145597839 - YPDSF_0531 - hypothetical protein 517 49.37 0 592771..594129 - 452 145597840 - YPDSF_0532 - hypothetical protein 518 38.44 -2 594691..595434 + 247 145597841 - YPDSF_0533 - quorum-sensing transcriptional regulator 519 41.17 -1 595415..596065 - 216 145597842 - YPDSF_0534 - N-acylhomoserine lactone synthase YspI 520 49.29 0 597610..597891 + 93 145597843 - YPDSF_0535 - membrane protein 521 38.13 -2 598342..598737 + 131 145597844 - YPDSF_0536 - putative lipoprotein 522 47.73 0 598805..599068 + 87 145597845 - YPDSF_0537 - insertion element protein 523 51.70 0 601013..601513 + 166 145597846 - YPDSF_0538 - hypothetical protein 524 55.28 +1 601562..603106 + 514 145597847 - YPDSF_0539 - hypothetical protein 525 59.79 +2 603118..604470 + 450 145597848 - YPDSF_0540 - hypothetical protein 526 61.28 +2 604467..605153 + 228 145597849 - YPDSF_0541 - membrane protein 527 62.64 +2 605153..606889 + 578 145597850 - YPDSF_0542 - OmpA-family membrane protein 528 49.38 0 606866..607351 - 161 145597851 - YPDSF_0543 - hypothetical protein 529 50.41 0 606893..607384 + 163 145597852 - YPDSF_0544 - hypothetical protein 530 58.51 +2 607802..610450 + 882 145597853 - YPDSF_0545 - Clp ATPase 531 56.70 +1 610447..612795 + 782 145597854 - YPDSF_0546 - Rhs element Vgr protein 532 43.73 0 612811..615108 + 765 145597855 - YPDSF_0547 - kinase 533 33.46 -2 615095..615862 + 255 145597856 - YPDSF_0548 - hypothetical protein 534 51.45 0 615958..616233 + 91 145597857 - YPDSF_0549 - insertion sequence protein 535 46.34 0 616287..616655 + 122 145597858 - YPDSF_0550 - insertion sequence protein 536 51.10 0 617263..617898 + 211 145597859 - YPDSF_0551 - hypothetical protein 537 49.67 0 619055..619207 + 50 145597860 - YPDSF_0553 - hypothetical protein 538 45.58 0 619062..621389 + 775 145597861 - YPDSF_0554 - ornithine decarboxylase 539 47.08 0 621945..622904 + 319 145597862 - YPDSF_0555 - sugar ABC transporter periplasmic binding protein 540 48.67 0 622950..624449 + 499 145597863 - YPDSF_0556 - sugar transport ATP-binding protein 541 47.36 0 624482..625465 + 327 145597864 - YPDSF_0557 - sugar transport system permease protein 542 53.05 +1 625548..627692 - 714 145597865 - YPDSF_0558 - hydroxamate-type ferrisiderophore receptor 543 54.31 +1 627685..628785 - 366 145597866 - YPDSF_0559 - hypothetical protein 544 46.19 0 629084..630172 - 362 145597867 mltC YPDSF_0560 - murein transglycosylase C 545 41.39 -1 630343..630615 - 90 145597868 - YPDSF_0561 - hypothetical protein 546 50.40 0 630793..631911 - 372 145597869 - YPDSF_0562 - adenine DNA glycosylase 547 51.67 0 632246..632965 + 239 145597870 trmB YPDSF_0563 - tRNA (guanine-N(7))-methyltransferase 548 42.81 -1 632965..633291 + 108 145597871 - YPDSF_0564 - hypothetical protein 549 48.76 0 633402..634328 + 308 145597872 - YPDSF_0565 - glutaminase 550 49.15 0 634440..634970 + 176 145597873 - YPDSF_0566 - hypothetical protein 551 51.22 0 634928..635173 + 81 145597874 - YPDSF_0567 - hypothetical protein 552 37.22 -2 635669..645001 + 3110 145597875 - YPDSF_0568 - virulence determinant 553 49.26 0 645191..646333 - 380 145597876 - YPDSF_0569 - coproporphyrinogen III oxidase 554 53.20 +1 646314..646907 - 197 145597877 - YPDSF_0570 - putative deoxyribonucleotide triphosphate pyrophosphatase 555 50.52 0 647007..647297 - 96 145597878 - YPDSF_0571 - hypothetical protein 556 46.31 0 647294..647848 - 184 145597879 - YPDSF_0572 - membrane protein 557 50.97 0 648136..648957 - 273 145597880 - YPDSF_0573 - pyrroline-5-carboxylate reductase 558 48.93 0 649090..649788 - 232 145597881 - YPDSF_0574 - hypothetical protein 559 47.73 0 649808..650932 + 374 145597882 - YPDSF_0575 - hypothetical protein 560 52.60 0 651041..652156 - 371 145597883 - YPDSF_0576 - agmatine deiminase 561 50.40 0 652160..653044 - 294 145597884 - YPDSF_0577 - carbon-nitrogen hydrolase 562 53.19 +1 653224..653646 - 140 145597885 - YPDSF_0578 - Holliday junction resolvase-like protein 563 46.45 0 653646..654209 - 187 145597886 - YPDSF_0579 - hypothetical protein 564 49.17 0 654325..655284 - 319 145597887 - YPDSF_0580 - glutathione synthetase 565 50.00 0 655310..656041 - 243 145597888 - YPDSF_0581 - hypothetical protein 566 43.45 0 656082..656249 + 55 145597889 - YPDSF_0582 - hypothetical protein 567 47.88 0 656293..657000 - 235 145597890 - YPDSF_0583 - endonuclease I 568 48.39 0 657098..657655 - 185 145597891 - YPDSF_0584 - hypothetical protein 569 49.78 0 657803..658957 - 384 145597892 - YPDSF_0585 - S-adenosylmethionine synthetase 570 50.10 0 660164..662143 + 659 145597893 - YPDSF_0586 - arginine decarboxylase 571 47.35 0 662303..662623 + 106 145597894 - YPDSF_0587 - Rieske protein 572 48.87 0 662913..663665 - 250 145597895 - YPDSF_0588 - lipoprotein 573 52.08 0 664156..666150 + 664 145597896 - YPDSF_0589 - transketolase 574 45.75 0 666458..666916 + 152 145597897 - YPDSF_0590 - transposase for the IS1541 insertion element 575 49.46 0 667257..668273 + 338 145597898 - YPDSF_0591 - erythrose 4-phosphate dehydrogenase 576 50.95 0 668376..669539 + 387 145597899 pgk YPDSF_0592 - phosphoglycerate kinase 577 47.22 0 669659..670738 + 359 145597900 - YPDSF_0593 - fructose-bisphosphate aldolase 578 50.11 0 671176..672045 + 289 145597901 - YPDSF_0594 - membrane protein 579 50.81 0 672308..672925 + 205 145597902 - YPDSF_0595 - arginine exporter protein 580 49.44 0 673094..673894 + 266 145597903 - YPDSF_0596 - hypothetical protein 581 53.91 +1 673905..674813 - 302 145597904 - YPDSF_0597 - chromosome replication initiation inhibitor protein 582 47.95 0 675155..675811 + 218 145597905 - YPDSF_0598 - ribose-5-phosphate isomerase A 583 48.87 0 676118..677359 + 413 145597906 - YPDSF_0599 - D-3-phosphoglycerate dehydrogenase 584 45.97 0 677748..678206 + 152 145597907 - YPDSF_0600 - transposase for the IS1541 insertion element 585 51.76 0 678335..678931 - 198 145597908 - YPDSF_0601 - 5-formyltetrahydrofolate cyclo-ligase-family protein 586 42.12 -1 679295..679624 - 109 145597909 - YPDSF_0602 - Z-ring-associated protein 587 46.98 0 679961..680539 + 192 145597910 - YPDSF_0603 - hypothetical protein 588 51.45 0 680627..681940 + 437 145597911 - YPDSF_0604 - proline aminopeptidase P II 589 55.05 +1 682026..683204 + 392 145597912 - YPDSF_0605 - 2-octaprenyl-6-methoxyphenyl hydroxylase 590 53.94 +1 683254..684597 + 447 145597913 - YPDSF_0606 - hypothetical protein 591 50.55 0 685318..686415 + 365 145597914 gcvT YPDSF_0607 - glycine cleavage system aminomethyltransferase T 592 49.35 0 686484..686870 + 128 145597915 - YPDSF_0608 - glycine cleavage system protein H 593 51.46 0 687082..689961 + 959 145597916 - YPDSF_0609 - glycine dehydrogenase 594 42.24 -1 690339..690776 + 145 145597917 - YPDSF_0610 - hypothetical protein 595 30.16 -2 691147..691272 + 41 145597918 - YPDSF_0611 - hypothetical protein 596 30.30 -2 691824..691988 + 54 145597919 - YPDSF_0612 - hypothetical protein 597 43.21 -1 694065..695168 + 367 145597920 - YPDSF_0614 - hypothetical protein 598 50.28 0 695370..696071 + 233 145597921 - YPDSF_0615 - hemolysin III 599 45.18 0 696329..696826 + 165 145597922 - YPDSF_0616 - hypothetical protein 600 51.96 0 696899..697891 - 330 145597923 - YPDSF_0617 - putative global regulator 601 45.32 0 698208..698474 + 88 145597924 - YPDSF_0618 - hypothetical protein 602 52.11 0 698455..698880 + 141 145597925 - YPDSF_0619 - hypothetical protein 603 49.64 0 698880..699578 + 232 145597926 - YPDSF_0620 - DNA-binding response regulator CreB 604 50.88 0 699603..701021 + 472 145597927 - YPDSF_0621 - sensory histidine kinase CreC 605 45.77 0 701121..702599 + 492 145597928 - YPDSF_0622 - hypothetical protein 606 45.53 0 702689..703270 - 193 145597929 - YPDSF_0623 - flavodoxin FldB 607 50.22 0 703314..704213 + 299 145597930 xerD YPDSF_0624 - site-specific tyrosine recombinase XerD 608 45.61 0 704244..704960 + 238 145597931 - YPDSF_0625 - thiol:disulfide interchange protein DsbC 609 52.88 +1 704967..706700 + 577 145597932 - YPDSF_0626 - ssDNA exonuclease RecJ 610 46.73 0 707045..707977 + 310 145597933 prfB YPDSF_0627 - peptide chain release factor 2 611 47.96 0 707987..709504 + 505 145597934 lysS YPDSF_0628 - lysyl-tRNA synthetase 612 48.56 0 709937..711151 + 404 145597935 - YPDSF_0629 - integrase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0