version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 455 35.47 -2 527830..529371 - 513 145597778 - YPDSF_0468 - hypothetical protein 456 46.07 0 529410..529982 - 190 145597779 - YPDSF_0469 - hypothetical protein 457 37.55 -2 529966..530439 - 157 145597780 - YPDSF_0470 - hypothetical protein 458 35.67 -2 530436..531206 - 256 145597781 - YPDSF_0471 - hypothetical protein 459 30.22 -2 531190..532023 - 277 145597782 - YPDSF_0472 - hypothetical protein 460 33.22 -2 532020..532895 - 291 145597783 - YPDSF_0473 - hypothetical protein 461 42.58 -1 532892..534178 - 428 145597784 - YPDSF_0474 - type II secretion protein 462 33.69 -2 534190..535317 - 375 145597785 - YPDSF_0475 - hypothetical protein 463 43.56 0 535615..536064 - 149 145597786 - YPDSF_0476 - outer membrane secretin family protein 464 35.79 -2 536079..536933 - 284 145597787 - YPDSF_0477 - hypothetical protein 465 35.52 -2 536930..537796 - 288 145597788 - YPDSF_0478 - hypothetical protein 466 38.53 -1 537848..538270 - 140 145597789 - YPDSF_0479 - hypothetical protein 467 45.75 0 538470..538928 + 152 145597790 - YPDSF_0480 - transposase for the IS1541 insertion element 468 50.34 0 539281..541761 + 826 145597791 - YPDSF_0481 - outer membrane usher protein 469 48.89 0 541779..542498 + 239 145597792 - YPDSF_0482 - fimbrial chaperone protein 470 46.39 0 543840..544919 - 359 145597793 - YPDSF_0485 - iron-enterobactin transporter periplasmic binding protein 471 42.77 -1 545775..546770 + 331 145597794 - YPDSF_0486 - hypothetical protein 472 47.67 0 546862..547440 - 192 145597795 - YPDSF_0487 - lipoprotein 473 37.40 -2 547443..547565 + 40 145597796 - YPDSF_0488 - hypothetical protein 474 44.92 0 547634..549730 - 698 145597797 flhA YPDSF_0489 - flagellar biosynthesis protein FlhA 475 44.62 0 549717..550850 - 377 145597798 flhB YPDSF_0490 - flagellar biosynthesis protein FlhB 476 47.42 0 550850..551623 - 257 145597799 - YPDSF_0491 - flagellar assembly protein 477 45.05 0 551630..551902 - 90 145597800 - YPDSF_0492 - flagellar assembly protein 478 51.49 0 551904..552674 - 256 145597801 fliP YPDSF_0493 - flagellar biosynthesis protein FliP 479 44.44 0 552671..553084 - 137 145597802 - YPDSF_0494 - flagellar switch protein 480 37.56 -2 553077..553976 - 299 145597803 - YPDSF_0495 - flagellar motor switch protein 481 44.61 0 554491..555519 + 342 145597804 - YPDSF_0496 - sigma-54 transcriptional regulatory protein 482 51.44 0 555536..555916 + 126 145597805 - YPDSF_0497 - flagellar hook-basal body complex protein 483 50.21 0 555926..557566 + 546 145597806 fliF YPDSF_0498 - flagellar MS-ring protein 484 50.29 0 557538..558581 + 347 145597807 fliG YPDSF_0499 - flagellar motor switch protein G 485 53.84 +1 558586..559302 + 238 145597808 fliH YPDSF_0500 - flagellar assembly protein H 486 57.94 +2 559295..560623 + 442 145597809 fliI YPDSF_0501 - flagellum-specific ATP synthase 487 50.23 0 560627..561064 + 145 145597810 - YPDSF_0502 - hypothetical protein 488 47.89 0 561392..561817 - 141 145597811 - YPDSF_0503 - hypothetical protein 489 52.06 0 561824..562090 - 88 145597812 - YPDSF_0504 - flagellar regulatory protein 490 48.80 0 562319..563236 - 305 145597813 flgA YPDSF_0505 - flagellar basal body P-ring biosynthesis protein FlgA 491 45.83 0 563264..563671 + 135 145597814 flgB YPDSF_0506 - flagellar basal body rod protein FlgB 492 52.82 0 563674..564099 + 141 145597815 flgC YPDSF_0507 - flagellar basal body rod protein FlgC 493 51.29 0 564102..564758 + 218 145597816 flgD YPDSF_0508 - flagellar basal body rod modification protein 494 50.97 0 564813..566054 + 413 145597817 flgE YPDSF_0509 - flagellar hook protein FlgE 495 55.46 +1 566054..566785 + 243 145597818 flgF YPDSF_0510 - flagellar basal body rod protein FlgF 496 52.29 0 566853..567638 + 261 145597819 flgG YPDSF_0511 - flagellar basal body rod protein FlgG 497 53.00 +1 567673..568338 + 221 145597820 flgH YPDSF_0512 - flagellar basal body L-ring protein 498 54.25 +1 568352..569527 + 391 145597821 flgI YPDSF_0513 - flagellar basal body P-ring protein 499 50.34 0 569537..569830 + 97 145597822 flgJ YPDSF_0514 - peptidoglycan hydrolase 500 45.15 0 569943..571304 + 453 145597823 flgK YPDSF_0515 - flagellar hook-associated protein FlgK 501 40.26 -1 571333..572256 + 307 145597824 flgL YPDSF_0516 - flagellar hook-associated protein FlgL 502 50.79 0 572268..573281 + 337 145597825 - YPDSF_0517 - hypothetical protein 503 42.73 -1 573445..573891 - 148 145597826 - YPDSF_0518 - hypothetical protein 504 45.27 0 573872..574918 - 348 145597827 - YPDSF_0519 - regulatory protein 505 49.75 0 575544..576749 + 401 145597828 - YPDSF_0520 - flagellin 506 48.37 0 577308..578504 + 398 145597829 - YPDSF_0521 - flagellin 507 46.44 0 579165..579950 + 261 145597830 - YPDSF_0522 - transposase for insertion sequence IS1661 508 44.35 0 580198..581622 + 474 145597831 - YPDSF_0523 - Sodium:galactoside symporter 509 50.30 0 581881..584061 - 726 145597832 - YPDSF_0524 - ferric siderophore receptor 510 53.65 +1 584133..585461 - 442 145597833 - YPDSF_0525 - siderophore biosynthesis protein IucD 511 53.92 +1 585458..587206 - 582 145597834 - YPDSF_0526 - siderophore biosynthesis protein IucC 512 55.42 +1 587203..588153 - 316 145597835 - YPDSF_0527 - siderophore biosynthesis protein IucB 513 54.62 +1 588137..589207 - 356 145597836 - YPDSF_0528 - siderophore biosynthesis protein, IucA familly 514 50.41 0 589300..589908 - 202 145597837 - YPDSF_0529 - hypothetical protein 515 55.15 +1 590048..591271 + 407 145597838 - YPDSF_0530 - hypothetical protein 516 38.37 -2 591561..592394 - 277 145597839 - YPDSF_0531 - hypothetical protein 517 49.37 0 592771..594129 - 452 145597840 - YPDSF_0532 - hypothetical protein 518 38.44 -2 594691..595434 + 247 145597841 - YPDSF_0533 - quorum-sensing transcriptional regulator 519 41.17 -1 595415..596065 - 216 145597842 - YPDSF_0534 - N-acylhomoserine lactone synthase YspI 520 49.29 0 597610..597891 + 93 145597843 - YPDSF_0535 - membrane protein 521 38.13 -2 598342..598737 + 131 145597844 - YPDSF_0536 - putative lipoprotein 522 47.73 0 598805..599068 + 87 145597845 - YPDSF_0537 - insertion element protein 523 51.70 0 601013..601513 + 166 145597846 - YPDSF_0538 - hypothetical protein 524 55.28 +1 601562..603106 + 514 145597847 - YPDSF_0539 - hypothetical protein 525 59.79 +2 603118..604470 + 450 145597848 - YPDSF_0540 - hypothetical protein 526 61.28 +2 604467..605153 + 228 145597849 - YPDSF_0541 - membrane protein 527 62.64 +2 605153..606889 + 578 145597850 - YPDSF_0542 - OmpA-family membrane protein 528 49.38 0 606866..607351 - 161 145597851 - YPDSF_0543 - hypothetical protein 529 50.41 0 606893..607384 + 163 145597852 - YPDSF_0544 - hypothetical protein 530 58.51 +2 607802..610450 + 882 145597853 - YPDSF_0545 - Clp ATPase 531 56.70 +1 610447..612795 + 782 145597854 - YPDSF_0546 - Rhs element Vgr protein 532 43.73 0 612811..615108 + 765 145597855 - YPDSF_0547 - kinase 533 33.46 -2 615095..615862 + 255 145597856 - YPDSF_0548 - hypothetical protein 534 51.45 0 615958..616233 + 91 145597857 - YPDSF_0549 - insertion sequence protein 535 46.34 0 616287..616655 + 122 145597858 - YPDSF_0550 - insertion sequence protein 536 51.10 0 617263..617898 + 211 145597859 - YPDSF_0551 - hypothetical protein 537 49.67 0 619055..619207 + 50 145597860 - YPDSF_0553 - hypothetical protein 538 45.58 0 619062..621389 + 775 145597861 - YPDSF_0554 - ornithine decarboxylase 539 47.08 0 621945..622904 + 319 145597862 - YPDSF_0555 - sugar ABC transporter periplasmic binding protein 540 48.67 0 622950..624449 + 499 145597863 - YPDSF_0556 - sugar transport ATP-binding protein 541 47.36 0 624482..625465 + 327 145597864 - YPDSF_0557 - sugar transport system permease protein 542 53.05 +1 625548..627692 - 714 145597865 - YPDSF_0558 - hydroxamate-type ferrisiderophore receptor 543 54.31 +1 627685..628785 - 366 145597866 - YPDSF_0559 - hypothetical protein 544 46.19 0 629084..630172 - 362 145597867 mltC YPDSF_0560 - murein transglycosylase C 545 41.39 -1 630343..630615 - 90 145597868 - YPDSF_0561 - hypothetical protein 546 50.40 0 630793..631911 - 372 145597869 - YPDSF_0562 - adenine DNA glycosylase 547 51.67 0 632246..632965 + 239 145597870 trmB YPDSF_0563 - tRNA (guanine-N(7))-methyltransferase 548 42.81 -1 632965..633291 + 108 145597871 - YPDSF_0564 - hypothetical protein 549 48.76 0 633402..634328 + 308 145597872 - YPDSF_0565 - glutaminase 550 49.15 0 634440..634970 + 176 145597873 - YPDSF_0566 - hypothetical protein 551 51.22 0 634928..635173 + 81 145597874 - YPDSF_0567 - hypothetical protein 552 37.22 -2 635669..645001 + 3110 145597875 - YPDSF_0568 - virulence determinant 553 49.26 0 645191..646333 - 380 145597876 - YPDSF_0569 - coproporphyrinogen III oxidase 554 53.20 +1 646314..646907 - 197 145597877 - YPDSF_0570 - putative deoxyribonucleotide triphosphate pyrophosphatase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0