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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 405 52.79 0 474681..475703 - 340 145597728 - YPDSF_0418 - transposase for insertion sequence IS100 406 52.45 0 476110..476313 + 67 145597729 - YPDSF_0419 - hypothetical protein 407 50.93 0 476247..476621 + 124 145597730 - YPDSF_0420 - hypothetical protein 408 47.80 0 476618..476776 - 52 145597731 - YPDSF_0421 - hypothetical protein 409 48.81 0 477695..479077 + 460 145597732 - YPDSF_0422 - hypothetical protein 410 42.25 -1 479086..479556 + 156 145597733 - YPDSF_0423 - hypothetical protein 411 41.45 -1 479583..480038 + 151 145597734 - YPDSF_0424 - hypothetical protein 412 51.55 0 480055..480345 + 96 145597735 - YPDSF_0425 - hypothetical protein 413 52.21 0 480323..480661 + 112 145597736 - YPDSF_0426 - hypothetical protein 414 48.55 0 481179..483005 - 608 145597737 - YPDSF_0427 - RNA polymerase sigma factor RpoD 415 48.08 0 483163..484911 - 582 145597738 dnaG YPDSF_0428 - DNA primase 416 46.30 0 485047..485262 - 71 145597739 rpsU YPDSF_0429 - 30S ribosomal protein S21 417 51.87 0 485668..486681 + 337 145597740 - YPDSF_0430 - O-sialoglycoprotein endopeptidase 418 48.85 0 486798..487448 - 216 145597741 - YPDSF_0431 - putative glycerol-3-phosphate acyltransferase PlsY 419 50.00 0 487556..487915 + 119 145597742 folB YPDSF_0432 - bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 420 48.23 0 488189..489007 + 272 145597743 - YPDSF_0433 - undecaprenyl pyrophosphate phosphatase 421 53.35 +1 489243..490481 - 412 145597744 cca YPDSF_0434 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 422 45.99 0 490641..491264 - 207 145597745 - YPDSF_0435 - putative signal transduction protein 423 50.61 0 491568..492875 + 435 145597746 - YPDSF_0436 - hypothetical protein 424 52.80 0 493046..495901 + 951 145597747 - YPDSF_0437 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 425 52.97 +1 496036..497466 + 476 145597748 - YPDSF_0438 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 426 52.60 0 497503..498753 + 416 145597749 - YPDSF_0439 - inner membrane protein YjeH 427 48.23 0 499078..499359 - 93 145597750 - YPDSF_0440 - hypothetical protein 428 52.45 0 499928..500581 + 217 145597751 ribB YPDSF_0441 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 429 50.83 0 501023..501805 + 260 145597752 - YPDSF_0442 - hypothetical protein 430 46.34 0 501966..503126 - 386 145597753 - YPDSF_0443 - hypothetical protein 431 53.42 +1 503136..503822 - 228 145597754 - YPDSF_0444 - hypothetical protein 432 47.21 0 504123..505520 - 465 145597755 tolC YPDSF_0445 - outer membrane channel protein 433 49.61 0 505916..506548 + 210 145597756 nudF YPDSF_0446 - ADP-ribose pyrophosphatase NudF 434 46.48 0 506582..507007 + 141 145597757 - YPDSF_0447 - hypothetical protein 435 50.00 0 507016..507915 + 299 145597758 - YPDSF_0448 - cyclic 3',5'-adenosine monophosphate phosphodiesterase 436 46.39 0 507915..508496 + 193 145597759 - YPDSF_0449 - esterase YqiA 437 50.95 0 508598..510493 + 631 145597760 - YPDSF_0450 - DNA topoisomerase IV subunit B 438 53.07 +1 510497..511408 + 303 145597761 - YPDSF_0451 - LysR family regulatory protein 439 46.84 0 511466..512050 - 194 145597762 - YPDSF_0452 - modulator of drug activity 440 42.97 -1 512123..512371 - 82 145597763 - YPDSF_0453 - hypothetical protein 441 51.23 0 512354..514627 + 757 145597764 - YPDSF_0454 - DNA topoisomerase IV subunit A 442 47.54 0 514916..515647 + 243 145597765 - YPDSF_0455 - acyltransferase 443 44.44 0 515637..515816 - 59 145597766 - YPDSF_0456 - hypothetical protein 444 52.42 0 515826..517250 + 474 145597767 - YPDSF_0457 - repressor protein for FtsI 445 51.74 0 517558..519105 + 515 145597768 - YPDSF_0458 - hypothetical protein 446 51.91 0 519090..519902 + 270 145597769 - YPDSF_0459 - hypothetical protein 447 48.92 0 519924..520757 - 277 145597770 dkgA YPDSF_0460 - 2,5-diketo-D-gluconate reductase A 448 45.71 0 520904..521113 + 69 145597771 - YPDSF_0461 - hypothetical protein 449 51.38 0 521176..522333 - 385 145597772 - YPDSF_0462 - iron-containing alcohol dehydrogenase 450 48.55 0 522731..523624 + 297 145597773 - YPDSF_0463 - AraC family transcription regulator 451 48.72 0 523716..524378 - 220 145597774 - YPDSF_0464 - DedA family membrane protein 452 48.43 0 524571..525782 - 403 145597775 - YPDSF_0465 - cystathionine beta-lyase 453 52.02 0 526261..527298 + 345 145597776 - YPDSF_0466 - MotA/TolQ/ExbB proton channel family protein 454 48.36 0 527308..527733 + 141 145597777 - YPDSF_0467 - biopolymer transport protein ExbD 455 35.47 -2 527830..529371 - 513 145597778 - YPDSF_0468 - hypothetical protein 456 46.07 0 529410..529982 - 190 145597779 - YPDSF_0469 - hypothetical protein 457 37.55 -2 529966..530439 - 157 145597780 - YPDSF_0470 - hypothetical protein 458 35.67 -2 530436..531206 - 256 145597781 - YPDSF_0471 - hypothetical protein 459 30.22 -2 531190..532023 - 277 145597782 - YPDSF_0472 - hypothetical protein 460 33.22 -2 532020..532895 - 291 145597783 - YPDSF_0473 - hypothetical protein 461 42.58 -1 532892..534178 - 428 145597784 - YPDSF_0474 - type II secretion protein 462 33.69 -2 534190..535317 - 375 145597785 - YPDSF_0475 - hypothetical protein 463 43.56 0 535615..536064 - 149 145597786 - YPDSF_0476 - outer membrane secretin family protein 464 35.79 -2 536079..536933 - 284 145597787 - YPDSF_0477 - hypothetical protein 465 35.52 -2 536930..537796 - 288 145597788 - YPDSF_0478 - hypothetical protein 466 38.53 -1 537848..538270 - 140 145597789 - YPDSF_0479 - hypothetical protein 467 45.75 0 538470..538928 + 152 145597790 - YPDSF_0480 - transposase for the IS1541 insertion element 468 50.34 0 539281..541761 + 826 145597791 - YPDSF_0481 - outer membrane usher protein 469 48.89 0 541779..542498 + 239 145597792 - YPDSF_0482 - fimbrial chaperone protein 470 46.39 0 543840..544919 - 359 145597793 - YPDSF_0485 - iron-enterobactin transporter periplasmic binding protein 471 42.77 -1 545775..546770 + 331 145597794 - YPDSF_0486 - hypothetical protein 472 47.67 0 546862..547440 - 192 145597795 - YPDSF_0487 - lipoprotein 473 37.40 -2 547443..547565 + 40 145597796 - YPDSF_0488 - hypothetical protein 474 44.92 0 547634..549730 - 698 145597797 flhA YPDSF_0489 - flagellar biosynthesis protein FlhA 475 44.62 0 549717..550850 - 377 145597798 flhB YPDSF_0490 - flagellar biosynthesis protein FlhB 476 47.42 0 550850..551623 - 257 145597799 - YPDSF_0491 - flagellar assembly protein 477 45.05 0 551630..551902 - 90 145597800 - YPDSF_0492 - flagellar assembly protein 478 51.49 0 551904..552674 - 256 145597801 fliP YPDSF_0493 - flagellar biosynthesis protein FliP 479 44.44 0 552671..553084 - 137 145597802 - YPDSF_0494 - flagellar switch protein 480 37.56 -2 553077..553976 - 299 145597803 - YPDSF_0495 - flagellar motor switch protein 481 44.61 0 554491..555519 + 342 145597804 - YPDSF_0496 - sigma-54 transcriptional regulatory protein 482 51.44 0 555536..555916 + 126 145597805 - YPDSF_0497 - flagellar hook-basal body complex protein 483 50.21 0 555926..557566 + 546 145597806 fliF YPDSF_0498 - flagellar MS-ring protein 484 50.29 0 557538..558581 + 347 145597807 fliG YPDSF_0499 - flagellar motor switch protein G 485 53.84 +1 558586..559302 + 238 145597808 fliH YPDSF_0500 - flagellar assembly protein H 486 57.94 +2 559295..560623 + 442 145597809 fliI YPDSF_0501 - flagellum-specific ATP synthase 487 50.23 0 560627..561064 + 145 145597810 - YPDSF_0502 - hypothetical protein 488 47.89 0 561392..561817 - 141 145597811 - YPDSF_0503 - hypothetical protein 489 52.06 0 561824..562090 - 88 145597812 - YPDSF_0504 - flagellar regulatory protein 490 48.80 0 562319..563236 - 305 145597813 flgA YPDSF_0505 - flagellar basal body P-ring biosynthesis protein FlgA 491 45.83 0 563264..563671 + 135 145597814 flgB YPDSF_0506 - flagellar basal body rod protein FlgB 492 52.82 0 563674..564099 + 141 145597815 flgC YPDSF_0507 - flagellar basal body rod protein FlgC 493 51.29 0 564102..564758 + 218 145597816 flgD YPDSF_0508 - flagellar basal body rod modification protein 494 50.97 0 564813..566054 + 413 145597817 flgE YPDSF_0509 - flagellar hook protein FlgE 495 55.46 +1 566054..566785 + 243 145597818 flgF YPDSF_0510 - flagellar basal body rod protein FlgF 496 52.29 0 566853..567638 + 261 145597819 flgG YPDSF_0511 - flagellar basal body rod protein FlgG 497 53.00 +1 567673..568338 + 221 145597820 flgH YPDSF_0512 - flagellar basal body L-ring protein 498 54.25 +1 568352..569527 + 391 145597821 flgI YPDSF_0513 - flagellar basal body P-ring protein 499 50.34 0 569537..569830 + 97 145597822 flgJ YPDSF_0514 - peptidoglycan hydrolase 500 45.15 0 569943..571304 + 453 145597823 flgK YPDSF_0515 - flagellar hook-associated protein FlgK 501 40.26 -1 571333..572256 + 307 145597824 flgL YPDSF_0516 - flagellar hook-associated protein FlgL 502 50.79 0 572268..573281 + 337 145597825 - YPDSF_0517 - hypothetical protein 503 42.73 -1 573445..573891 - 148 145597826 - YPDSF_0518 - hypothetical protein 504 45.27 0 573872..574918 - 348 145597827 - YPDSF_0519 - regulatory protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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