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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 379 58.18 +2 443249..443413 + 54 145597702 - YPDSF_0390 - hypothetical protein 380 54.68 +1 443681..445966 - 761 145597703 - YPDSF_0391 - putative autotransporter protein 381 48.39 0 446026..447021 - 331 145597704 - YPDSF_0392 - hypothetical protein 382 48.04 0 447123..448502 - 459 145597705 - YPDSF_0393 - hypothetical protein 383 48.55 0 448840..449943 + 367 145597706 - YPDSF_0394 - transporter ATP-binding protein 384 53.07 +1 450026..453379 + 1117 145597707 - YPDSF_0395 - hypothetical protein 385 47.92 0 453488..454474 + 328 145597708 - YPDSF_0396 - LacI-family regulatory protein 386 52.05 0 454551..455795 + 414 145597709 - YPDSF_0397 - sugar binding protein 387 46.94 0 455849..456730 + 293 145597710 - YPDSF_0398 - permease protein 388 46.64 0 456730..457548 + 272 145597711 - YPDSF_0399 - permease 389 55.62 +1 457545..458060 + 171 145597712 - YPDSF_0400 - hypothetical protein 390 57.83 +2 458111..460294 + 727 145597713 - YPDSF_0401 - glycosyl hydrolase 391 52.13 0 460358..461884 - 508 145597714 - YPDSF_0402 - hypothetical protein 392 53.15 +1 461889..463790 - 633 145597715 - YPDSF_0403 - membrane protein 393 54.00 +1 463774..464823 - 349 145597716 - YPDSF_0404 - multidrug resistance protein MdtN 394 51.79 0 464833..465168 - 111 145597717 - YPDSF_0405 - hypothetical protein 395 45.77 0 465165..465365 - 66 145597718 - YPDSF_0406 - hypothetical protein 396 42.58 -1 466131..467363 + 410 145597719 - YPDSF_0407 - aminotransferase 397 34.68 -2 468822..469268 + 148 145597720 - YPDSF_0410 - hypothetical protein 398 35.41 -2 469402..470028 + 208 145597721 - YPDSF_0411 - hypothetical protein 399 35.43 -2 470044..470424 + 126 145597722 - YPDSF_0412 - translational inhibitor protein 400 51.11 0 470709..471113 + 134 145597723 - YPDSF_0413 - translational inhibitor protein 401 45.21 0 471328..471630 - 100 145597724 - YPDSF_0414 - hypothetical protein 402 49.23 0 471890..472606 - 238 145597725 - YPDSF_0415 - hypothetical protein 403 55.41 +1 472768..473700 + 310 145597726 - YPDSF_0416 - LysR family regulatory protein 404 50.38 0 473902..474681 - 259 145597727 - YPDSF_0417 - transposase/IS protein 405 52.79 0 474681..475703 - 340 145597728 - YPDSF_0418 - transposase for insertion sequence IS100 406 52.45 0 476110..476313 + 67 145597729 - YPDSF_0419 - hypothetical protein 407 50.93 0 476247..476621 + 124 145597730 - YPDSF_0420 - hypothetical protein 408 47.80 0 476618..476776 - 52 145597731 - YPDSF_0421 - hypothetical protein 409 48.81 0 477695..479077 + 460 145597732 - YPDSF_0422 - hypothetical protein 410 42.25 -1 479086..479556 + 156 145597733 - YPDSF_0423 - hypothetical protein 411 41.45 -1 479583..480038 + 151 145597734 - YPDSF_0424 - hypothetical protein 412 51.55 0 480055..480345 + 96 145597735 - YPDSF_0425 - hypothetical protein 413 52.21 0 480323..480661 + 112 145597736 - YPDSF_0426 - hypothetical protein 414 48.55 0 481179..483005 - 608 145597737 - YPDSF_0427 - RNA polymerase sigma factor RpoD 415 48.08 0 483163..484911 - 582 145597738 dnaG YPDSF_0428 - DNA primase 416 46.30 0 485047..485262 - 71 145597739 rpsU YPDSF_0429 - 30S ribosomal protein S21 417 51.87 0 485668..486681 + 337 145597740 - YPDSF_0430 - O-sialoglycoprotein endopeptidase 418 48.85 0 486798..487448 - 216 145597741 - YPDSF_0431 - putative glycerol-3-phosphate acyltransferase PlsY 419 50.00 0 487556..487915 + 119 145597742 folB YPDSF_0432 - bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 420 48.23 0 488189..489007 + 272 145597743 - YPDSF_0433 - undecaprenyl pyrophosphate phosphatase 421 53.35 +1 489243..490481 - 412 145597744 cca YPDSF_0434 - multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 422 45.99 0 490641..491264 - 207 145597745 - YPDSF_0435 - putative signal transduction protein 423 50.61 0 491568..492875 + 435 145597746 - YPDSF_0436 - hypothetical protein 424 52.80 0 493046..495901 + 951 145597747 - YPDSF_0437 - bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 425 52.97 +1 496036..497466 + 476 145597748 - YPDSF_0438 - bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 426 52.60 0 497503..498753 + 416 145597749 - YPDSF_0439 - inner membrane protein YjeH 427 48.23 0 499078..499359 - 93 145597750 - YPDSF_0440 - hypothetical protein 428 52.45 0 499928..500581 + 217 145597751 ribB YPDSF_0441 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 429 50.83 0 501023..501805 + 260 145597752 - YPDSF_0442 - hypothetical protein 430 46.34 0 501966..503126 - 386 145597753 - YPDSF_0443 - hypothetical protein 431 53.42 +1 503136..503822 - 228 145597754 - YPDSF_0444 - hypothetical protein 432 47.21 0 504123..505520 - 465 145597755 tolC YPDSF_0445 - outer membrane channel protein 433 49.61 0 505916..506548 + 210 145597756 nudF YPDSF_0446 - ADP-ribose pyrophosphatase NudF 434 46.48 0 506582..507007 + 141 145597757 - YPDSF_0447 - hypothetical protein 435 50.00 0 507016..507915 + 299 145597758 - YPDSF_0448 - cyclic 3',5'-adenosine monophosphate phosphodiesterase 436 46.39 0 507915..508496 + 193 145597759 - YPDSF_0449 - esterase YqiA 437 50.95 0 508598..510493 + 631 145597760 - YPDSF_0450 - DNA topoisomerase IV subunit B 438 53.07 +1 510497..511408 + 303 145597761 - YPDSF_0451 - LysR family regulatory protein 439 46.84 0 511466..512050 - 194 145597762 - YPDSF_0452 - modulator of drug activity 440 42.97 -1 512123..512371 - 82 145597763 - YPDSF_0453 - hypothetical protein 441 51.23 0 512354..514627 + 757 145597764 - YPDSF_0454 - DNA topoisomerase IV subunit A 442 47.54 0 514916..515647 + 243 145597765 - YPDSF_0455 - acyltransferase 443 44.44 0 515637..515816 - 59 145597766 - YPDSF_0456 - hypothetical protein 444 52.42 0 515826..517250 + 474 145597767 - YPDSF_0457 - repressor protein for FtsI 445 51.74 0 517558..519105 + 515 145597768 - YPDSF_0458 - hypothetical protein 446 51.91 0 519090..519902 + 270 145597769 - YPDSF_0459 - hypothetical protein 447 48.92 0 519924..520757 - 277 145597770 dkgA YPDSF_0460 - 2,5-diketo-D-gluconate reductase A 448 45.71 0 520904..521113 + 69 145597771 - YPDSF_0461 - hypothetical protein 449 51.38 0 521176..522333 - 385 145597772 - YPDSF_0462 - iron-containing alcohol dehydrogenase 450 48.55 0 522731..523624 + 297 145597773 - YPDSF_0463 - AraC family transcription regulator 451 48.72 0 523716..524378 - 220 145597774 - YPDSF_0464 - DedA family membrane protein 452 48.43 0 524571..525782 - 403 145597775 - YPDSF_0465 - cystathionine beta-lyase 453 52.02 0 526261..527298 + 345 145597776 - YPDSF_0466 - MotA/TolQ/ExbB proton channel family protein 454 48.36 0 527308..527733 + 141 145597777 - YPDSF_0467 - biopolymer transport protein ExbD 455 35.47 -2 527830..529371 - 513 145597778 - YPDSF_0468 - hypothetical protein 456 46.07 0 529410..529982 - 190 145597779 - YPDSF_0469 - hypothetical protein 457 37.55 -2 529966..530439 - 157 145597780 - YPDSF_0470 - hypothetical protein 458 35.67 -2 530436..531206 - 256 145597781 - YPDSF_0471 - hypothetical protein 459 30.22 -2 531190..532023 - 277 145597782 - YPDSF_0472 - hypothetical protein 460 33.22 -2 532020..532895 - 291 145597783 - YPDSF_0473 - hypothetical protein 461 42.58 -1 532892..534178 - 428 145597784 - YPDSF_0474 - type II secretion protein 462 33.69 -2 534190..535317 - 375 145597785 - YPDSF_0475 - hypothetical protein 463 43.56 0 535615..536064 - 149 145597786 - YPDSF_0476 - outer membrane secretin family protein 464 35.79 -2 536079..536933 - 284 145597787 - YPDSF_0477 - hypothetical protein 465 35.52 -2 536930..537796 - 288 145597788 - YPDSF_0478 - hypothetical protein 466 38.53 -1 537848..538270 - 140 145597789 - YPDSF_0479 - hypothetical protein 467 45.75 0 538470..538928 + 152 145597790 - YPDSF_0480 - transposase for the IS1541 insertion element 468 50.34 0 539281..541761 + 826 145597791 - YPDSF_0481 - outer membrane usher protein 469 48.89 0 541779..542498 + 239 145597792 - YPDSF_0482 - fimbrial chaperone protein 470 46.39 0 543840..544919 - 359 145597793 - YPDSF_0485 - iron-enterobactin transporter periplasmic binding protein 471 42.77 -1 545775..546770 + 331 145597794 - YPDSF_0486 - hypothetical protein 472 47.67 0 546862..547440 - 192 145597795 - YPDSF_0487 - lipoprotein 473 37.40 -2 547443..547565 + 40 145597796 - YPDSF_0488 - hypothetical protein 474 44.92 0 547634..549730 - 698 145597797 flhA YPDSF_0489 - flagellar biosynthesis protein FlhA 475 44.62 0 549717..550850 - 377 145597798 flhB YPDSF_0490 - flagellar biosynthesis protein FlhB 476 47.42 0 550850..551623 - 257 145597799 - YPDSF_0491 - flagellar assembly protein 477 45.05 0 551630..551902 - 90 145597800 - YPDSF_0492 - flagellar assembly protein 478 51.49 0 551904..552674 - 256 145597801 fliP YPDSF_0493 - flagellar biosynthesis protein FliP 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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