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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3751 52.02 0 4401927..4402991 - 354 145601074 - YPDSF_3834 - bifunctional regulatory protein/DNA repair protein 3752 49.08 0 4403180..4403668 + 162 145601075 - YPDSF_3835 - methyltransferase 3753 49.76 0 4403791..4404612 - 273 145601076 cysE YPDSF_3836 - serine acetyltransferase 3754 51.57 0 4404878..4405897 - 339 145601077 gpsA YPDSF_3837 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 3755 48.43 0 4405897..4406373 - 158 145601078 - YPDSF_3838 - preprotein translocase subunit SecB 3756 51.41 0 4406461..4406709 - 82 145601079 - YPDSF_3839 - glutaredoxin 3 3757 45.06 0 4406828..4407262 - 144 145601080 - YPDSF_3840 - hypothetical protein 3758 50.13 0 4407659..4409206 + 515 145601081 - YPDSF_3841 - phosphoglyceromutase 3759 50.04 0 4409216..4410586 + 456 145601082 - YPDSF_3842 - hypothetical protein 3760 50.46 0 4410610..4411047 + 145 145601083 - YPDSF_3843 - hypothetical protein 3761 47.50 0 4411044..4411544 + 166 145601084 - YPDSF_3844 - hypothetical protein 3762 48.15 0 4411682..4412707 - 341 145601085 tdh YPDSF_3845 - L-threonine 3-dehydrogenase 3763 50.08 0 4412717..4413928 - 403 145601086 - YPDSF_3846 - 2-amino-3-ketobutyrate coenzyme A ligase 3764 45.12 0 4414174..4415106 + 310 145601087 rfaD YPDSF_3847 - ADP-L-glycero-D-mannoheptose-6-epimerase 3765 51.74 0 4415137..4416201 + 354 145601088 - YPDSF_3848 - ADP-heptose:LPS heptosyltransferase II 3766 50.72 0 4416201..4417166 + 321 145601089 - YPDSF_3849 - ADP-heptose:LPS heptosyl transferase I 3767 49.71 0 4417478..4418863 + 461 145601090 - YPDSF_3850 - 3-deoxy-D-manno-octulosonic-acid transferase 3768 46.62 0 4418864..4419646 + 260 145601091 - YPDSF_3851 - lipopolysaccharide core biosynthesis glycosyl transferase 3769 46.25 0 4419643..4420122 + 159 145601092 coaD YPDSF_3852 - phosphopantetheine adenylyltransferase 3770 48.51 0 4420091..4420927 - 278 145601093 - YPDSF_3853 - formamidopyrimidine-DNA glycosylase 3771 39.29 -1 4421010..4421177 - 55 145601094 rpmG YPDSF_3854 - 50S ribosomal protein L33 3772 50.63 0 4421189..4421425 - 78 145601095 rpmB YPDSF_3855 - 50S ribosomal protein L28 3773 45.44 0 4421688..4422356 - 222 145601096 radC YPDSF_3856 - DNA repair protein RadC 3774 47.67 0 4422436..4423767 + 443 145601097 - YPDSF_3857 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3775 49.02 0 4423745..4424203 + 152 145601098 dut YPDSF_3858 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3776 47.91 0 4424325..4424921 + 198 145601099 slmA YPDSF_3859 - nucleoid occlusion protein 3777 50.77 0 4425056..4425703 - 215 145601100 pyrE YPDSF_3860 - orotate phosphoribosyltransferase 3778 51.32 0 4425870..4426586 - 238 145601101 rph YPDSF_3861 - ribonuclease PH 3779 48.50 0 4426713..4427576 + 287 145601102 - YPDSF_3862 - hypothetical protein 3780 47.28 0 4427979..4428602 + 207 145601103 - YPDSF_3863 - membrane protein 3781 48.12 0 4428615..4430318 - 567 145601104 ligB YPDSF_3864 - NAD-dependent DNA ligase LigB 3782 46.47 0 4430719..4431342 + 207 145601105 gmk YPDSF_3865 - guanylate kinase 3783 51.31 0 4431397..4431663 + 88 145601106 - YPDSF_3866 - DNA-directed RNA polymerase, omega chain 3784 48.93 0 4431683..4433791 + 702 145601107 - YPDSF_3867 - bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3785 49.64 0 4433797..4434489 + 230 145601108 - YPDSF_3868 - tRNA guanosine-2'-O-methyltransferase 3786 51.63 0 4434490..4436571 + 693 145601109 - YPDSF_3869 - ATP-dependent DNA helicase RecG 3787 50.04 0 4436937..4438151 - 404 145601110 - YPDSF_3870 - sodium/glutamate symport carrier protein 3788 50.67 0 4438356..4439774 + 472 145601111 - YPDSF_3871 - membrane permease 3789 48.30 0 4439922..4441631 + 569 145601112 - YPDSF_3872 - exported protein 3790 50.97 0 4441766..4442689 - 307 145601113 - YPDSF_3873 - hypothetical protein 3791 52.79 0 4442959..4443981 + 340 145601114 - YPDSF_3874 - transposase 3792 50.38 0 4443981..4444760 + 259 145601115 - YPDSF_3875 - transposase/IS protein 3793 48.86 0 4444834..4445271 - 145 145601116 - YPDSF_3876 - D-tyrosyl-tRNA deacylase 3794 48.36 0 4445278..4446222 - 314 145601117 rbn YPDSF_3877 - ribonuclease BN 3795 44.16 0 4446259..4446849 - 196 145601118 - YPDSF_3878 - phosphatase 3796 49.01 0 4447171..4448994 - 607 145601119 - YPDSF_3879 - GTPase 3797 50.78 0 4449556..4450965 + 469 145601120 glnA YPDSF_3880 - glutamine synthetase 3798 49.26 0 4451188..4452267 + 359 145601121 glnL YPDSF_3881 - nitrogen regulation protein NR(II) 3799 52.65 0 4452275..4453687 + 470 145601122 glnG YPDSF_3882 - nitrogen regulation protein NR(I) 3800 47.74 0 4453741..4455114 - 457 145601123 - YPDSF_3883 - coproporphyrinogen III oxidase 3801 48.50 0 4455297..4455863 - 188 145601124 - YPDSF_3884 - hypothetical protein 3802 46.54 0 4456608..4457258 + 216 145601125 - YPDSF_3885 - GTPase EngB 3803 47.48 0 4457666..4460464 - 932 145601126 - YPDSF_3886 - DNA polymerase I 3804 42.15 -1 4460956..4461579 - 207 145601127 - YPDSF_3887 - periplasmic protein disulfide isomerase I 3805 46.50 0 4461607..4462593 - 328 145601128 - YPDSF_3888 - serine/threonine protein kinase 3806 41.11 -1 4462684..4462953 - 89 145601129 - YPDSF_3889 - hypothetical protein 3807 43.54 0 4463107..4463694 + 195 145601130 mobA YPDSF_3890 - molybdopterin-guanine dinucleotide biosynthesis protein A 3808 40.68 -1 4463694..4464224 + 176 145601131 - YPDSF_3891 - molybdopterin-guanine dinucleotide biosynthesis protein B 3809 49.55 0 4464282..4465490 - 402 145601132 - YPDSF_3892 - transposase for the IS285 insertion element 3810 44.06 0 4471691..4472380 + 229 145601133 - YPDSF_3893 - GntR-famly transcriptional regulator 3811 46.46 0 4472460..4473884 + 474 145601134 - YPDSF_3894 - membrane transport protein 3812 49.71 0 4473881..4474051 - 56 145601135 - YPDSF_3895 - hypothetical protein 3813 48.10 0 4475081..4475500 - 139 145601136 - YPDSF_3898 - D-ribose pyranase 3814 45.75 0 4475705..4477573 - 622 145601137 trkD YPDSF_3899 - potassium transport protein Kup 3815 46.91 0 4477847..4479385 + 512 145601138 - YPDSF_3900 - regulatory ATPase RavA 3816 47.72 0 4479389..4480855 + 488 145601139 yieM YPDSF_3901 - hypothetical protein 3817 45.52 0 4480954..4481946 - 330 145601140 - YPDSF_3902 - asparagine synthetase AsnA 3818 41.56 -1 4482116..4482577 + 153 145601141 - YPDSF_3903 - DNA-binding transcriptional regulator AsnC 3819 42.86 -1 4482670..4483110 + 146 145601142 - YPDSF_3904 - flavodoxin 3820 47.88 0 4483491..4485380 + 629 145601143 - YPDSF_3905 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 3821 45.73 0 4485526..4486146 + 206 145601144 gidB YPDSF_3906 - glucose-inhibited division protein B 3822 46.61 0 4486813..4487196 + 127 145601145 - YPDSF_3907 - F0F1 ATP synthase subunit I 3823 46.06 0 4487236..4488060 + 274 145601146 - YPDSF_3908 - F0F1 ATP synthase subunit A 3824 52.08 0 4488110..4488349 + 79 145601147 - YPDSF_3909 - F0F1 ATP synthase subunit C 3825 49.26 0 4488411..4488881 + 156 145601148 - YPDSF_3910 - F0F1 ATP synthase subunit B 3826 49.44 0 4488896..4489429 + 177 145601149 - YPDSF_3911 - F0F1 ATP synthase subunit delta 3827 49.94 0 4489444..4490985 + 513 145601150 - YPDSF_3912 - F0F1 ATP synthase subunit alpha 3828 50.93 0 4491047..4491910 + 287 145601151 - YPDSF_3913 - F0F1 ATP synthase subunit gamma 3829 49.82 0 4492066..4493448 + 460 145601152 - YPDSF_3914 - F0F1 ATP synthase subunit beta 3830 49.52 0 4493479..4493892 + 137 145601153 atpC YPDSF_3915 - F0F1 ATP synthase subunit epsilon 3831 47.48 0 4494513..4495883 + 456 145601154 glmU YPDSF_3916 - bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 3832 47.21 0 4496084..4497913 + 609 145601155 - YPDSF_3917 - D-fructose-6-phosphate amidotransferase 3833 46.01 0 4498396..4499436 + 346 145601156 - YPDSF_3918 - phosphate transporter subunit 3834 46.50 0 4499650..4500621 + 323 145601157 pstC YPDSF_3919 - phosphate transporter permease subunit 3835 48.65 0 4500623..4501510 + 295 145601158 pstA YPDSF_3920 - phosphate transporter permease subunit 3836 45.95 0 4501591..4502367 + 258 145601159 - YPDSF_3921 - phosphate transporter subunit 3837 43.71 0 4502455..4503177 + 240 145601160 - YPDSF_3922 - transcriptional regulator PhoU 3838 41.67 -1 4503473..4504144 + 223 145601161 - YPDSF_3923 - hypothetical protein 3839 45.50 0 4504364..4505218 + 284 145601162 - YPDSF_3924 - periplasmic solute-binding protein 3840 49.46 0 4505401..4506138 + 245 145601163 - YPDSF_3925 - ABC transporter permease 3841 49.60 0 4506140..4506895 + 251 145601164 - YPDSF_3926 - amino acid transport system permease 3842 47.68 0 4506930..4507598 - 222 145601165 - YPDSF_3927 - 6-phosphogluconate phosphatase 3843 50.14 0 4508034..4509419 + 461 145601166 - YPDSF_3928 - xanthine/uracil permease family protein 3844 35.10 -2 4509964..4510584 + 206 145601167 - YPDSF_3929 - hypothetical protein 3845 48.83 0 4511395..4512594 - 399 145601168 - YPDSF_3930 - trans-2-enoyl-CoA reductase 3846 51.21 0 4512780..4514144 - 454 145601169 trmE YPDSF_3931 - tRNA modification GTPase TrmE 3847 48.14 0 4514287..4515927 - 546 145601170 - YPDSF_3932 - putative inner membrane protein translocase component YidC 3848 53.88 +1 4515930..4516187 - 85 145601171 - YPDSF_3933 - hypothetical protein 3849 50.83 0 4516151..4516510 - 119 145601172 rnpA YPDSF_3934 - ribonuclease P 3850 51.06 0 4516529..4516669 - 46 145601173 rpmH YPDSF_3935 - 50S ribosomal protein L34 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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