version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3714 42.95 -1 4363921..4364388 + 155 145601037 - YPDSF_3795 - hypothetical protein 3715 49.07 0 4364914..4365129 - 71 145601038 rpmE YPDSF_3796 - 50S ribosomal protein L31 3716 52.89 +1 4365382..4367580 + 732 145601039 - YPDSF_3797 - primosome assembly protein PriA 3717 48.66 0 4367957..4368961 + 334 145601040 - YPDSF_3798 - DNA-binding transcriptional regulator CytR 3718 53.07 +1 4369027..4369872 + 281 145601041 - YPDSF_3799 - cell division protein FtsN 3719 48.76 0 4369972..4370496 + 174 145601042 - YPDSF_3800 - ATP-dependent protease peptidase subunit 3720 48.80 0 4370567..4371898 + 443 145601043 hslU YPDSF_3801 - ATP-dependent protease ATP-binding subunit 3721 48.82 0 4372122..4373051 + 309 145601044 - YPDSF_3802 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3722 47.53 0 4373193..4373678 + 161 145601045 - YPDSF_3803 - ribonuclease activity regulator protein RraA 3723 53.16 +1 4373795..4374379 - 194 145601046 - YPDSF_3804 - hypothetical protein 3724 29.33 -2 4374685..4374834 - 49 145601047 - YPDSF_3805 - hypothetical protein 3725 45.83 0 4375009..4375248 - 79 145601048 - YPDSF_3806 - hypothetical protein 3726 39.13 -1 4375461..4376753 + 430 145601049 - YPDSF_3807 - hypothetical protein 3727 43.83 0 4376746..4378860 + 704 145601050 - YPDSF_3808 - hypothetical protein 3728 50.00 0 4378869..4379054 - 61 145601051 - YPDSF_3809 - hypothetical protein 3729 45.75 0 4379231..4379689 + 152 145601052 - YPDSF_3810 - transposase for the IS1541 insertion element 3730 42.92 -1 4379897..4380136 - 79 145601053 - YPDSF_3811 - hypothetical protein 3731 50.88 0 4380796..4381644 + 282 145601054 - YPDSF_3812 - glycerol uptake facilitator protein 3732 52.03 0 4381821..4383344 + 507 145601055 - YPDSF_3813 - hypothetical protein 3733 52.42 0 4383581..4384591 + 336 145601056 glpX YPDSF_3814 - fructose 1,6-bisphosphatase II 3734 52.07 0 4384746..4385492 + 248 145601057 - YPDSF_3815 - ferredoxin-NADP reductase 3735 51.08 0 4385833..4386294 - 153 145601058 - YPDSF_3816 - hypothetical protein 3736 45.13 0 4386415..4387050 + 211 145601059 - YPDSF_3817 - hypothetical protein 3737 48.96 0 4387179..4387946 + 255 145601060 tpiA YPDSF_3818 - triosephosphate isomerase 3738 50.08 0 4388178..4389413 - 411 145601061 - YPDSF_3819 - transcriptional regulator 3739 51.63 0 4389550..4390287 + 245 145601062 - YPDSF_3820 - hypothetical protein 3740 54.06 +1 4390284..4390997 + 237 145601063 - YPDSF_3821 - hypothetical protein 3741 48.65 0 4392607..4393383 + 258 145601064 - YPDSF_3824 - hypothetical protein 3742 46.16 0 4393633..4394622 - 329 145601065 - YPDSF_3825 - sulfate transporter subunit 3743 47.15 0 4394843..4395826 - 327 145601066 - YPDSF_3826 - 6-phosphofructokinase 3744 48.50 0 4396044..4396946 - 300 145601067 fieF YPDSF_3827 - ferrous iron efflux protein F 3745 51.04 0 4397508..4398467 - 319 145601068 - YPDSF_3828 - hypothetical protein 3746 46.33 0 4398512..4398688 - 58 145601069 - YPDSF_3829 - hypothetical protein 3747 46.08 0 4398784..4398987 + 67 145601070 - YPDSF_3830 - hypothetical protein 3748 46.63 0 4399145..4399633 - 162 145601071 cpxP YPDSF_3831 - periplasmic stress adaptor protein CpxP 3749 49.93 0 4399807..4400505 + 232 145601072 - YPDSF_3832 - DNA-binding transcriptional regulator CpxR 3750 49.89 0 4400502..4401878 + 458 145601073 cpxA YPDSF_3833 - two-component sensor protein 3751 52.02 0 4401927..4402991 - 354 145601074 - YPDSF_3834 - bifunctional regulatory protein/DNA repair protein 3752 49.08 0 4403180..4403668 + 162 145601075 - YPDSF_3835 - methyltransferase 3753 49.76 0 4403791..4404612 - 273 145601076 cysE YPDSF_3836 - serine acetyltransferase 3754 51.57 0 4404878..4405897 - 339 145601077 gpsA YPDSF_3837 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 3755 48.43 0 4405897..4406373 - 158 145601078 - YPDSF_3838 - preprotein translocase subunit SecB 3756 51.41 0 4406461..4406709 - 82 145601079 - YPDSF_3839 - glutaredoxin 3 3757 45.06 0 4406828..4407262 - 144 145601080 - YPDSF_3840 - hypothetical protein 3758 50.13 0 4407659..4409206 + 515 145601081 - YPDSF_3841 - phosphoglyceromutase 3759 50.04 0 4409216..4410586 + 456 145601082 - YPDSF_3842 - hypothetical protein 3760 50.46 0 4410610..4411047 + 145 145601083 - YPDSF_3843 - hypothetical protein 3761 47.50 0 4411044..4411544 + 166 145601084 - YPDSF_3844 - hypothetical protein 3762 48.15 0 4411682..4412707 - 341 145601085 tdh YPDSF_3845 - L-threonine 3-dehydrogenase 3763 50.08 0 4412717..4413928 - 403 145601086 - YPDSF_3846 - 2-amino-3-ketobutyrate coenzyme A ligase 3764 45.12 0 4414174..4415106 + 310 145601087 rfaD YPDSF_3847 - ADP-L-glycero-D-mannoheptose-6-epimerase 3765 51.74 0 4415137..4416201 + 354 145601088 - YPDSF_3848 - ADP-heptose:LPS heptosyltransferase II 3766 50.72 0 4416201..4417166 + 321 145601089 - YPDSF_3849 - ADP-heptose:LPS heptosyl transferase I 3767 49.71 0 4417478..4418863 + 461 145601090 - YPDSF_3850 - 3-deoxy-D-manno-octulosonic-acid transferase 3768 46.62 0 4418864..4419646 + 260 145601091 - YPDSF_3851 - lipopolysaccharide core biosynthesis glycosyl transferase 3769 46.25 0 4419643..4420122 + 159 145601092 coaD YPDSF_3852 - phosphopantetheine adenylyltransferase 3770 48.51 0 4420091..4420927 - 278 145601093 - YPDSF_3853 - formamidopyrimidine-DNA glycosylase 3771 39.29 -1 4421010..4421177 - 55 145601094 rpmG YPDSF_3854 - 50S ribosomal protein L33 3772 50.63 0 4421189..4421425 - 78 145601095 rpmB YPDSF_3855 - 50S ribosomal protein L28 3773 45.44 0 4421688..4422356 - 222 145601096 radC YPDSF_3856 - DNA repair protein RadC 3774 47.67 0 4422436..4423767 + 443 145601097 - YPDSF_3857 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3775 49.02 0 4423745..4424203 + 152 145601098 dut YPDSF_3858 - deoxyuridine 5'-triphosphate nucleotidohydrolase 3776 47.91 0 4424325..4424921 + 198 145601099 slmA YPDSF_3859 - nucleoid occlusion protein 3777 50.77 0 4425056..4425703 - 215 145601100 pyrE YPDSF_3860 - orotate phosphoribosyltransferase 3778 51.32 0 4425870..4426586 - 238 145601101 rph YPDSF_3861 - ribonuclease PH 3779 48.50 0 4426713..4427576 + 287 145601102 - YPDSF_3862 - hypothetical protein 3780 47.28 0 4427979..4428602 + 207 145601103 - YPDSF_3863 - membrane protein 3781 48.12 0 4428615..4430318 - 567 145601104 ligB YPDSF_3864 - NAD-dependent DNA ligase LigB 3782 46.47 0 4430719..4431342 + 207 145601105 gmk YPDSF_3865 - guanylate kinase 3783 51.31 0 4431397..4431663 + 88 145601106 - YPDSF_3866 - DNA-directed RNA polymerase, omega chain 3784 48.93 0 4431683..4433791 + 702 145601107 - YPDSF_3867 - bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3785 49.64 0 4433797..4434489 + 230 145601108 - YPDSF_3868 - tRNA guanosine-2'-O-methyltransferase 3786 51.63 0 4434490..4436571 + 693 145601109 - YPDSF_3869 - ATP-dependent DNA helicase RecG 3787 50.04 0 4436937..4438151 - 404 145601110 - YPDSF_3870 - sodium/glutamate symport carrier protein 3788 50.67 0 4438356..4439774 + 472 145601111 - YPDSF_3871 - membrane permease 3789 48.30 0 4439922..4441631 + 569 145601112 - YPDSF_3872 - exported protein 3790 50.97 0 4441766..4442689 - 307 145601113 - YPDSF_3873 - hypothetical protein 3791 52.79 0 4442959..4443981 + 340 145601114 - YPDSF_3874 - transposase 3792 50.38 0 4443981..4444760 + 259 145601115 - YPDSF_3875 - transposase/IS protein 3793 48.86 0 4444834..4445271 - 145 145601116 - YPDSF_3876 - D-tyrosyl-tRNA deacylase 3794 48.36 0 4445278..4446222 - 314 145601117 rbn YPDSF_3877 - ribonuclease BN 3795 44.16 0 4446259..4446849 - 196 145601118 - YPDSF_3878 - phosphatase 3796 49.01 0 4447171..4448994 - 607 145601119 - YPDSF_3879 - GTPase 3797 50.78 0 4449556..4450965 + 469 145601120 glnA YPDSF_3880 - glutamine synthetase 3798 49.26 0 4451188..4452267 + 359 145601121 glnL YPDSF_3881 - nitrogen regulation protein NR(II) 3799 52.65 0 4452275..4453687 + 470 145601122 glnG YPDSF_3882 - nitrogen regulation protein NR(I) 3800 47.74 0 4453741..4455114 - 457 145601123 - YPDSF_3883 - coproporphyrinogen III oxidase 3801 48.50 0 4455297..4455863 - 188 145601124 - YPDSF_3884 - hypothetical protein 3802 46.54 0 4456608..4457258 + 216 145601125 - YPDSF_3885 - GTPase EngB 3803 47.48 0 4457666..4460464 - 932 145601126 - YPDSF_3886 - DNA polymerase I 3804 42.15 -1 4460956..4461579 - 207 145601127 - YPDSF_3887 - periplasmic protein disulfide isomerase I 3805 46.50 0 4461607..4462593 - 328 145601128 - YPDSF_3888 - serine/threonine protein kinase 3806 41.11 -1 4462684..4462953 - 89 145601129 - YPDSF_3889 - hypothetical protein 3807 43.54 0 4463107..4463694 + 195 145601130 mobA YPDSF_3890 - molybdopterin-guanine dinucleotide biosynthesis protein A 3808 40.68 -1 4463694..4464224 + 176 145601131 - YPDSF_3891 - molybdopterin-guanine dinucleotide biosynthesis protein B 3809 49.55 0 4464282..4465490 - 402 145601132 - YPDSF_3892 - transposase for the IS285 insertion element 3810 44.06 0 4471691..4472380 + 229 145601133 - YPDSF_3893 - GntR-famly transcriptional regulator 3811 46.46 0 4472460..4473884 + 474 145601134 - YPDSF_3894 - membrane transport protein 3812 49.71 0 4473881..4474051 - 56 145601135 - YPDSF_3895 - hypothetical protein 3813 48.10 0 4475081..4475500 - 139 145601136 - YPDSF_3898 - D-ribose pyranase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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