version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3503 48.39 0 4113370..4115328 + 652 145600826 cpdB YPDSF_3579 - bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 3504 48.80 0 4115483..4116148 + 221 145600827 - YPDSF_3580 - cell morphogenesis/cell wall metabolism regulator 3505 52.01 0 4116246..4116866 - 206 145600828 - YPDSF_3581 - peptidyl-prolyl cis-trans isomerase 3506 51.28 0 4117224..4117964 + 246 145600829 - YPDSF_3582 - hypothetical protein 3507 45.18 0 4118104..4118559 + 151 145600830 - YPDSF_3583 - hypothetical protein 3508 45.97 0 4118681..4119139 - 152 145600831 - YPDSF_3584 - transposase for the IS1541 insertion element 3509 49.45 0 4119335..4119787 - 150 145600832 rplI YPDSF_3585 - 50S ribosomal protein L9 3510 47.37 0 4119827..4120054 - 75 145600833 rpsR YPDSF_3586 - 30S ribosomal protein S18 3511 51.15 0 4120385..4120777 - 130 145600834 rpsF YPDSF_3587 - 30S ribosomal protein S6 3512 50.27 0 4121144..4121887 - 247 145600835 - YPDSF_3588 - esterase 3513 50.38 0 4121926..4122705 - 259 145600836 - YPDSF_3589 - transposase/IS protein 3514 52.79 0 4122705..4123727 - 340 145600837 - YPDSF_3590 - transposase 3515 50.64 0 4124044..4124355 + 103 145600838 - YPDSF_3591 - lipoprotein 3516 53.10 +1 4124427..4126070 - 547 145600839 - YPDSF_3592 - isovaleryl CoA dehydrogenase 3517 53.85 +1 4126478..4127218 - 246 145600840 - YPDSF_3593 - 23S rRNA (guanosine-2'-O-)-methyltransferase 3518 52.34 0 4127347..4129872 - 841 145600841 - YPDSF_3594 - exoribonuclease R 3519 44.73 0 4130113..4130577 - 154 145600842 - YPDSF_3595 - transcriptional repressor NsrR 3520 50.96 0 4130887..4132185 - 432 145600843 - YPDSF_3596 - adenylosuccinate synthetase 3521 48.76 0 4132285..4132485 - 66 145600844 - YPDSF_3597 - membrane protein 3522 50.25 0 4132657..4133661 - 334 145600845 - YPDSF_3598 - FtsH protease regulator HflC 3523 50.32 0 4133665..4134924 - 419 145600846 - YPDSF_3599 - FtsH protease regulator HflK 3524 49.26 0 4135165..4136451 - 428 145600847 - YPDSF_3600 - putative GTPase HflX 3525 46.08 0 4136550..4136855 - 101 145600848 hfq YPDSF_3601 - RNA-binding protein Hfq 3526 51.06 0 4136971..4137912 - 313 145600849 miaA YPDSF_3602 - tRNA delta(2)-isopentenylpyrophosphate transferase 3527 50.37 0 4137905..4139812 - 635 145600850 mutL YPDSF_3603 - DNA mismatch repair protein 3528 50.94 0 4139828..4141741 - 637 145600851 - YPDSF_3604 - N-acetylmuramoyl-L-alanine amidase-family protein 3529 53.72 +1 4141749..4142219 - 156 145600852 - YPDSF_3605 - putative ATPase 3530 53.00 +1 4142230..4143744 - 504 145600853 - YPDSF_3606 - hypothetical protein 3531 51.21 0 4143743..4144978 + 411 145600854 - YPDSF_3607 - iron-sulfur cluster-binding protein 3532 45.91 0 4145923..4146606 - 227 145600855 - YPDSF_3608 - oligoribonuclease 3533 50.33 0 4146668..4147720 + 350 145600856 - YPDSF_3609 - ribosome-associated GTPase 3534 51.94 0 4147907..4148035 - 42 145600857 - YPDSF_3610 - hypothetical protein 3535 50.34 0 4148045..4148926 + 293 145600858 - YPDSF_3611 - phosphatidylserine decarboxylase 3536 52.24 0 4148968..4152309 + 1113 145600859 - YPDSF_3612 - hypothetical protein 3537 49.28 0 4152430..4153407 - 325 145600860 - YPDSF_3613 - lysyl-tRNA synthetase 3538 52.91 +1 4153865..4155688 + 607 145600861 - YPDSF_3614 - fumarate reductase flavoprotein subunit 3539 49.39 0 4155681..4156415 + 244 145600862 - YPDSF_3615 - fumarate reductase iron-sulfur subunit 3540 48.09 0 4156432..4156824 + 130 145600863 - YPDSF_3616 - fumarate reductase subunit C 3541 49.86 0 4156841..4157197 + 118 145600864 - YPDSF_3617 - fumarate reductase subunit D 3542 51.52 0 4157362..4157823 - 153 145600865 - YPDSF_3618 - chaperone 3543 48.50 0 4157923..4158489 - 188 145600866 - YPDSF_3619 - elongation factor P 3544 47.42 0 4158525..4159553 + 342 145600867 - YPDSF_3620 - hypothetical protein 3545 46.62 0 4159838..4160236 - 132 145600868 - YPDSF_3621 - lipoprotein 3546 50.46 0 4160860..4162506 - 548 145600869 groEL YPDSF_3622 - chaperonin GroEL 3547 48.98 0 4162553..4162846 - 97 145600870 groES YPDSF_3623 - co-chaperonin GroES 3548 45.27 0 4163101..4163703 - 200 145600871 fxsA YPDSF_3624 - FxsA 3549 47.32 0 4164127..4165563 + 478 145600872 aspA YPDSF_3625 - aspartate ammonia-lyase 3550 50.92 0 4165683..4166984 + 433 145600873 - YPDSF_3626 - anaerobic C4-dicarboxylate transporter 3551 49.72 0 4167169..4167528 + 119 145600874 - YPDSF_3627 - divalent-cation tolerance protein CutA 3552 52.24 0 4167504..4169291 + 595 145600875 dipZ YPDSF_3628 - thiol:disulfide interchange protein precursor 3553 53.35 +1 4169353..4171500 - 715 145600876 - YPDSF_3629 - formate dehydrogenase H 3554 56.09 +1 4171523..4172080 - 185 145600877 - YPDSF_3630 - 4Fe-4S ferrodoxin 3555 52.93 +1 4172103..4174118 - 671 145600878 - YPDSF_3631 - putative oxidoreductase Fe-S binding subunit 3556 49.83 0 4174538..4175113 + 191 145600879 - YPDSF_3632 - putative transcriptional regulator 3557 34.12 -2 4175767..4178322 - 851 145600880 - YPDSF_3633 - enhancing factor 3558 26.19 -2 4178352..4178519 - 55 145600881 - YPDSF_3634 - hypothetical protein 3559 43.23 -1 4179237..4179539 - 100 145600882 - YPDSF_3635 - transposase 3560 42.80 -1 4179610..4179852 - 80 145600883 - YPDSF_3636 - hypothetical protein 3561 48.70 0 4180006..4181040 + 344 145600884 - YPDSF_3637 - rhamnose-proton symporter 3562 37.33 -2 4181015..4181164 + 49 145600885 - YPDSF_3638 - hypothetical protein 3563 49.03 0 4181189..4182061 - 290 145600886 - YPDSF_3639 - transcriptional activator RhaR 3564 47.81 0 4182194..4183015 - 273 145600887 - YPDSF_3640 - transcriptional activator RhaS 3565 43.09 -1 4183019..4183141 + 40 145600888 - YPDSF_3641 - hypothetical protein 3566 52.85 +1 4183271..4184899 + 542 145600889 rhaB YPDSF_3642 - rhamnulokinase 3567 52.90 +1 4184896..4186152 + 418 145600890 - YPDSF_3643 - L-rhamnose isomerase 3568 53.09 +1 4186165..4186989 + 274 145600891 - YPDSF_3644 - rhamnulose-1-phosphate aldolase 3569 51.09 0 4187056..4188204 + 382 145600892 - YPDSF_3645 - alcohol dehydrogenase 3570 50.48 0 4188218..4188532 + 104 145600893 - YPDSF_3646 - hypothetical protein 3571 56.83 +1 4188779..4189327 - 182 145600894 - YPDSF_3647 - single-strand DNA-binding protein 3572 51.97 0 4189785..4192628 + 947 145600895 uvrA YPDSF_3648 - excinuclease ABC subunit A 3573 46.94 0 4192721..4193080 - 119 145600896 - YPDSF_3649 - hypothetical protein 3574 50.50 0 4193607..4194800 - 397 145600897 - YPDSF_3650 - aromatic amino acid aminotransferase 3575 54.63 +1 4194986..4196065 - 359 145600898 alr YPDSF_3651 - alanine racemase 3576 52.10 0 4196162..4197568 - 468 145600899 - YPDSF_3652 - replicative DNA helicase 3577 54.27 +1 4197900..4198883 + 327 145600900 - YPDSF_3653 - quinone oxidoreductase, NADPH-dependent 3578 44.75 0 4199228..4199446 - 72 145600901 pspG YPDSF_3654 - phage shock protein G 3579 51.93 0 4199962..4200999 - 345 145600902 - YPDSF_3655 - tRNA-dihydrouridine synthase A 3580 48.15 0 4201251..4201763 + 170 145600903 - YPDSF_3656 - zinc uptake transcriptional repressor 3581 50.57 0 4201944..4202552 - 202 145600904 - YPDSF_3657 - LexA repressor 3582 47.58 0 4202677..4203048 - 123 145600905 - YPDSF_3658 - diacylglycerol kinase 3583 50.16 0 4203176..4205653 + 825 145600906 - YPDSF_3659 - glycerol-3-phosphate acyltransferase 3584 48.44 0 4205834..4206700 - 288 145600907 ubiA YPDSF_3660 - 4-hydroxybenzoate octaprenyltransferase 3585 50.86 0 4206866..4207390 - 174 145600908 ubiC YPDSF_3661 - chorismate pyruvate lyase 3586 50.27 0 4208222..4210777 + 851 145600909 - YPDSF_3662 - hypothetical protein 3587 59.09 +2 4210777..4212030 + 417 145600910 - YPDSF_3663 - Outer membrane autotransporter barrel 3588 48.06 0 4212374..4214431 - 685 145600911 - YPDSF_3664 - oxidoreductase 3589 53.11 +1 4215440..4216759 - 439 145600912 - YPDSF_3665 - hypothetical protein 3590 43.92 0 4217952..4218206 - 84 145600913 - YPDSF_3666 - membrane protein 3591 43.55 0 4218217..4218960 - 247 145600914 - YPDSF_3667 - putative periplasmic chaperone protein 3592 46.20 0 4219032..4221410 - 792 145600915 - YPDSF_3668 - outer membrane fimbrial usher protein 3593 46.95 0 4221661..4222299 - 212 145600916 - YPDSF_3669 - hypothetical protein 3594 46.53 0 4223012..4223587 - 191 145600917 - YPDSF_3670 - tellurium resistance protein 3595 48.19 0 4223771..4224349 - 192 145600918 - YPDSF_3671 - tellurium resistance protein 3596 48.46 0 4224413..4225450 - 345 145600919 - YPDSF_3672 - tellurium resistance protein 3597 46.71 0 4225472..4225927 - 151 145600920 - YPDSF_3673 - tellurite resistance protein 3598 51.90 0 4225960..4227144 - 394 145600921 - YPDSF_3674 - tellurite resistance protein 3599 49.66 0 4227144..4227737 - 197 145600922 - YPDSF_3675 - tellurium resistance protein 3600 49.06 0 4228013..4229074 + 353 145600923 - YPDSF_3676 - hypothetical protein 3601 53.21 +1 4229086..4230222 + 378 145600924 - YPDSF_3677 - hypothetical protein 3602 49.82 0 4230215..4231027 + 270 145600925 - YPDSF_3678 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0