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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3436 49.22 0 4027919..4028176 - 85 145600759 ilvM YPDSF_3512 - acetolactate synthase 2 regulatory subunit 3437 53.25 +1 4028173..4029819 - 548 145600760 - YPDSF_3513 - acetolactate synthase 2 catalytic subunit 3438 53.41 +1 4030442..4031965 + 507 145600761 - YPDSF_3514 - magnesium chelatase family protein 3439 48.94 0 4032222..4032644 - 140 145600762 - YPDSF_3515 - hypothetical protein 3440 47.51 0 4032679..4033560 + 293 145600763 - YPDSF_3516 - transcriptional regulator HdfR 3441 45.12 0 4033547..4034539 - 330 145600764 - YPDSF_3517 - inner membrane ABC transporter permease protein YjfF 3442 48.82 0 4034539..4035558 - 339 145600765 - YPDSF_3518 - sugar transport system permease 3443 45.88 0 4035570..4037060 - 496 145600766 - YPDSF_3519 - sugar transport system ATP-binding protein 3444 46.50 0 4037146..4038102 - 318 145600767 - YPDSF_3520 - periplasmic protein precursor 3445 48.73 0 4044968..4045831 - 287 162202299 - YPDSF_3521 - glutamate racemase 3446 46.52 0 4045776..4047671 - 631 145600769 btuB YPDSF_3522 - vitamin B12/cobalamin outer membrane transporter 3447 47.74 0 4048133..4049236 + 367 145600770 - YPDSF_3523 - tRNA (uracil-5-)-methyltransferase 3448 46.81 0 4049370..4049777 - 135 145600771 - YPDSF_3524 - hypothetical protein 3449 51.57 0 4049790..4050425 - 211 145600772 - YPDSF_3525 - DNA-binding transcriptional repressor FabR 3450 48.47 0 4050643..4052043 + 466 145600773 - YPDSF_3526 - soluble pyridine nucleotide transhydrogenase 3451 48.80 0 4052026..4052943 - 305 145600774 - YPDSF_3527 - DNA-binding transcriptional regulator OxyR 3452 46.31 0 4053090..4053821 + 243 145600775 - YPDSF_3528 - peroxiredoxin/glutaredoxin family protein 3453 51.78 0 4053916..4055379 + 487 145600776 - YPDSF_3529 - dihydrolipoamide dehydrogenase 3454 47.26 0 4055495..4056298 - 267 145600777 - YPDSF_3530 - membrane protein 3455 48.68 0 4056363..4057691 - 442 145600778 - YPDSF_3531 - HlyD family secretion protein 3456 49.06 0 4057767..4059584 - 605 145600779 - YPDSF_3532 - ABC transporter protein 3457 42.23 -1 4059741..4060358 - 205 145600780 - YPDSF_3533 - hemophore HasA 3458 44.36 0 4060580..4063072 - 830 145600781 - YPDSF_3534 - TonB dependent receptor protein 3459 50.66 0 4063671..4065044 - 457 145600782 - YPDSF_3535 - argininosuccinate lyase 3460 50.97 0 4065211..4065987 - 258 145600783 - YPDSF_3536 - acetylglutamate kinase 3461 50.45 0 4066153..4067157 - 334 145600784 argC YPDSF_3537 - N-acetyl-gamma-glutamyl-phosphate reductase 3462 50.43 0 4067408..4068571 + 387 145600785 - YPDSF_3538 - acetylornithine deacetylase 3463 52.56 0 4068945..4071581 + 878 145600786 - YPDSF_3539 - phosphoenolpyruvate carboxylase 3464 62.96 +2 4071733..4071948 - 71 145600787 - YPDSF_3540 - hypothetical protein 3465 46.44 0 4072892..4073677 + 261 145600788 - YPDSF_3541 - transposase for insertion sequence IS1661 3466 48.52 0 4073740..4074009 - 89 145600789 rpsO YPDSF_3542 - 30S ribosomal protein S15 3467 49.44 0 4074132..4075106 - 324 145600790 truB YPDSF_3543 - tRNA pseudouridine synthase B 3468 44.53 0 4075106..4075516 - 136 145600791 rbfA YPDSF_3544 - ribosome-binding factor A 3469 49.72 0 4075582..4078260 - 892 145600792 infB YPDSF_3545 - translation initiation factor IF-2 3470 49.13 0 4078285..4079772 - 495 145600793 nusA YPDSF_3546 - transcription elongation factor NusA 3471 46.80 0 4079794..4080246 - 150 145600794 - YPDSF_3547 - hypothetical protein 3472 48.21 0 4080778..4081113 - 111 145600795 secG YPDSF_3548 - preprotein translocase subunit SecG 3473 47.65 0 4081336..4082676 - 446 145600796 glmM YPDSF_3549 - phosphoglucosamine mutase 3474 47.60 0 4082686..4083519 - 277 145600797 folP YPDSF_3550 - dihydropteroate synthase 3475 46.98 0 4083639..4085573 - 644 145600798 hflB YPDSF_3551 - ATP-dependent metalloprotease 3476 45.56 0 4085630..4086259 - 209 145600799 rrmJ YPDSF_3552 - 23S rRNA methyltransferase J 3477 43.54 0 4086406..4086699 + 97 145600800 - YPDSF_3553 - hypothetical protein 3478 42.35 -1 4086827..4087303 - 158 145600801 greA YPDSF_3554 - transcription elongation factor GreA 3479 48.24 0 4087561..4089009 + 482 145600802 - YPDSF_3555 - D-alanyl-D-alanine carboxypeptidase/endopeptidase 3480 49.32 0 4089015..4089677 + 220 145600803 - YPDSF_3556 - DNA-binding transcriptional regulator BasR 3481 46.82 0 4089674..4090741 + 355 145600804 - YPDSF_3557 - sensor protein BasS/PmrB 3482 48.93 0 4090836..4092008 - 390 145600805 obgE YPDSF_3558 - GTPase ObgE 3483 48.63 0 4092009..4092995 - 328 145600806 - YPDSF_3559 - hypothetical protein 3484 48.84 0 4093083..4093340 - 85 145600807 rpmA YPDSF_3560 - 50S ribosomal protein L27 3485 45.51 0 4093360..4093671 - 103 145600808 rplU YPDSF_3561 - 50S ribosomal protein L21 3486 48.97 0 4093931..4094902 + 323 145600809 - YPDSF_3562 - octaprenyl diphosphate synthase 3487 46.84 0 4094999..4095346 - 115 145600810 - YPDSF_3563 - hypothetical protein 3488 49.64 0 4095530..4095805 + 91 145600811 - YPDSF_3564 - DNA-binding protein 3489 47.71 0 4096239..4097177 - 312 145600812 - YPDSF_3565 - malate dehydrogenase 3490 45.22 0 4097641..4098111 + 156 145600813 - YPDSF_3566 - arginine repressor 3491 40.91 -1 4098500..4098763 + 87 145600814 - YPDSF_3567 - hypothetical protein 3492 50.04 0 4099059..4100441 - 460 145600815 - YPDSF_3568 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 3493 46.55 0 4100612..4101625 + 337 145600816 - YPDSF_3569 - fructose-1,6-bisphosphatase 3494 46.78 0 4101825..4102352 + 175 145600817 - YPDSF_3570 - inorganic pyrophosphatase 3495 45.94 0 4102470..4102826 - 118 145600818 - YPDSF_3571 - hypothetical protein 3496 52.35 0 4102829..4106725 - 1298 145600819 - YPDSF_3572 - hypothetical protein 3497 51.35 0 4106722..4108458 - 578 145600820 - YPDSF_3573 - hypothetical protein 3498 53.21 +1 4108733..4109371 + 212 145600821 - YPDSF_3574 - methionine sulfoxide reductase A 3499 46.25 0 4109630..4110961 + 443 145600822 - YPDSF_3575 - hypothetical protein 3500 45.54 0 4111069..4111281 - 70 145600823 - YPDSF_3576 - hypothetical protein 3501 45.92 0 4111617..4112180 + 187 145600824 - YPDSF_3577 - hypothetical protein 3502 53.71 +1 4112183..4112923 - 246 145600825 - YPDSF_3578 - PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase 3503 48.39 0 4113370..4115328 + 652 145600826 cpdB YPDSF_3579 - bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein 3504 48.80 0 4115483..4116148 + 221 145600827 - YPDSF_3580 - cell morphogenesis/cell wall metabolism regulator 3505 52.01 0 4116246..4116866 - 206 145600828 - YPDSF_3581 - peptidyl-prolyl cis-trans isomerase 3506 51.28 0 4117224..4117964 + 246 145600829 - YPDSF_3582 - hypothetical protein 3507 45.18 0 4118104..4118559 + 151 145600830 - YPDSF_3583 - hypothetical protein 3508 45.97 0 4118681..4119139 - 152 145600831 - YPDSF_3584 - transposase for the IS1541 insertion element 3509 49.45 0 4119335..4119787 - 150 145600832 rplI YPDSF_3585 - 50S ribosomal protein L9 3510 47.37 0 4119827..4120054 - 75 145600833 rpsR YPDSF_3586 - 30S ribosomal protein S18 3511 51.15 0 4120385..4120777 - 130 145600834 rpsF YPDSF_3587 - 30S ribosomal protein S6 3512 50.27 0 4121144..4121887 - 247 145600835 - YPDSF_3588 - esterase 3513 50.38 0 4121926..4122705 - 259 145600836 - YPDSF_3589 - transposase/IS protein 3514 52.79 0 4122705..4123727 - 340 145600837 - YPDSF_3590 - transposase 3515 50.64 0 4124044..4124355 + 103 145600838 - YPDSF_3591 - lipoprotein 3516 53.10 +1 4124427..4126070 - 547 145600839 - YPDSF_3592 - isovaleryl CoA dehydrogenase 3517 53.85 +1 4126478..4127218 - 246 145600840 - YPDSF_3593 - 23S rRNA (guanosine-2'-O-)-methyltransferase 3518 52.34 0 4127347..4129872 - 841 145600841 - YPDSF_3594 - exoribonuclease R 3519 44.73 0 4130113..4130577 - 154 145600842 - YPDSF_3595 - transcriptional repressor NsrR 3520 50.96 0 4130887..4132185 - 432 145600843 - YPDSF_3596 - adenylosuccinate synthetase 3521 48.76 0 4132285..4132485 - 66 145600844 - YPDSF_3597 - membrane protein 3522 50.25 0 4132657..4133661 - 334 145600845 - YPDSF_3598 - FtsH protease regulator HflC 3523 50.32 0 4133665..4134924 - 419 145600846 - YPDSF_3599 - FtsH protease regulator HflK 3524 49.26 0 4135165..4136451 - 428 145600847 - YPDSF_3600 - putative GTPase HflX 3525 46.08 0 4136550..4136855 - 101 145600848 hfq YPDSF_3601 - RNA-binding protein Hfq 3526 51.06 0 4136971..4137912 - 313 145600849 miaA YPDSF_3602 - tRNA delta(2)-isopentenylpyrophosphate transferase 3527 50.37 0 4137905..4139812 - 635 145600850 mutL YPDSF_3603 - DNA mismatch repair protein 3528 50.94 0 4139828..4141741 - 637 145600851 - YPDSF_3604 - N-acetylmuramoyl-L-alanine amidase-family protein 3529 53.72 +1 4141749..4142219 - 156 145600852 - YPDSF_3605 - putative ATPase 3530 53.00 +1 4142230..4143744 - 504 145600853 - YPDSF_3606 - hypothetical protein 3531 51.21 0 4143743..4144978 + 411 145600854 - YPDSF_3607 - iron-sulfur cluster-binding protein 3532 45.91 0 4145923..4146606 - 227 145600855 - YPDSF_3608 - oligoribonuclease 3533 50.33 0 4146668..4147720 + 350 145600856 - YPDSF_3609 - ribosome-associated GTPase 3534 51.94 0 4147907..4148035 - 42 145600857 - YPDSF_3610 - hypothetical protein 3535 50.34 0 4148045..4148926 + 293 145600858 - YPDSF_3611 - phosphatidylserine decarboxylase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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