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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3400 51.55 0 3983832..3984572 - 246 145600723 - YPDSF_3473 - putative UDP-N-acetyl-D-mannosaminuronic acid transferase 3401 48.21 0 3984581..3985945 - 454 145600724 - YPDSF_3474 - putative entero common antigen polymerase 3402 50.37 0 3985942..3987027 - 361 145600725 - YPDSF_3475 - 4-alpha-L-fucosyltransferase 3403 50.12 0 3987050..3988306 - 418 145600726 - YPDSF_3476 - lipopolysaccharide biosynthesis protein 3404 48.81 0 3988308..3989438 - 376 145600727 - YPDSF_3477 - TDP-4-oxo-6-deoxy-D-glucose transaminase 3405 50.59 0 3989440..3990204 - 254 145600728 - YPDSF_3478 - TDP-fucosamine acetyltransferase 3406 49.32 0 3990155..3991036 - 293 145600729 - YPDSF_3479 - glucose-1-phosphate thymidylyltransferase 3407 51.30 0 3991314..3992387 - 357 145600730 - YPDSF_3480 - dTDP-D-glucose-4,6-dehydratase 3408 49.80 0 3992378..3993640 - 420 145600731 wecC YPDSF_3481 - UDP-N-acetyl-D-mannosamine dehydrogenase 3409 50.30 0 3993637..3994821 - 394 145600732 - YPDSF_3482 - UDP-N-acetylglucosamine 2-epimerase 3410 48.38 0 3995099..3996175 - 358 145600733 - YPDSF_3483 - lipopolysaccharide biosynthesis protein WzzE 3411 46.91 0 3996196..3997278 - 360 145600734 - YPDSF_3484 - undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 3412 45.87 0 3997828..3999087 - 419 145600735 rho YPDSF_3485 - transcription termination factor Rho 3413 45.87 0 3999567..3999893 - 108 145600736 - YPDSF_3486 - thioredoxin 1 3414 48.64 0 4000012..4001298 + 428 145600737 - YPDSF_3487 - ATP-dependent RNA helicase RhlB 3415 50.63 0 4001302..4002798 + 498 145600738 - YPDSF_3488 - guanosine pentaphosphate phosphohydrolase 3416 48.71 0 4002966..4004987 - 673 145600739 - YPDSF_3489 - ATP-dependent DNA helicase Rep 3417 45.04 0 4005191..4005472 + 93 145600740 - YPDSF_3490 - peptidyl-prolyl cis-trans isomerase C 3418 34.09 -2 4005711..4006502 + 263 145600741 - YPDSF_3491 - hypothetical protein 3419 43.69 0 4007294..4007824 + 176 145600742 - YPDSF_3492 - fimbrial protein 3420 42.21 -1 4007888..4008619 + 243 145600743 - YPDSF_3493 - fimbrial chaperone 3421 47.11 0 4008647..4011274 + 875 145600744 - YPDSF_3494 - outer membrane usher protein 3422 49.13 0 4011279..4012658 + 459 145600745 - YPDSF_3495 - hypothetical protein 3423 48.23 0 4012624..4013442 + 272 145600746 - YPDSF_3496 - chaperone protein 3424 42.79 -1 4016741..4016941 - 66 145600747 - YPDSF_3500 - hypothetical protein 3425 50.30 0 4017122..4018600 - 492 145600748 - YPDSF_3501 - ketol-acid reductoisomerase 3426 52.72 0 4018886..4019767 + 293 145600749 - YPDSF_3502 - DNA-binding transcriptional regulator IlvY 3427 38.57 -1 4019822..4020031 - 69 145600750 - YPDSF_3503 - hypothetical protein 3428 36.46 -2 4020643..4020834 + 63 145600751 - YPDSF_3504 - hypothetical protein 3429 39.29 -1 4020927..4021598 + 223 145600752 - YPDSF_3505 - hypothetical protein 3430 34.20 -2 4021582..4022043 + 153 145600753 - YPDSF_3506 - membrane protein 3431 34.20 -2 4022123..4022584 + 153 145600754 - YPDSF_3507 - membrane protein 3432 33.12 -2 4022664..4023128 + 154 145600755 - YPDSF_3508 - membrane protein 3433 53.66 +1 4023259..4024803 - 514 145600756 - YPDSF_3509 - threonine dehydratase 3434 53.11 +1 4024809..4026659 - 616 145600757 - YPDSF_3510 - dihydroxy-acid dehydratase 3435 51.56 0 4026970..4027896 - 308 145600758 - YPDSF_3511 - branched-chain amino acid aminotransferase 3436 49.22 0 4027919..4028176 - 85 145600759 ilvM YPDSF_3512 - acetolactate synthase 2 regulatory subunit 3437 53.25 +1 4028173..4029819 - 548 145600760 - YPDSF_3513 - acetolactate synthase 2 catalytic subunit 3438 53.41 +1 4030442..4031965 + 507 145600761 - YPDSF_3514 - magnesium chelatase family protein 3439 48.94 0 4032222..4032644 - 140 145600762 - YPDSF_3515 - hypothetical protein 3440 47.51 0 4032679..4033560 + 293 145600763 - YPDSF_3516 - transcriptional regulator HdfR 3441 45.12 0 4033547..4034539 - 330 145600764 - YPDSF_3517 - inner membrane ABC transporter permease protein YjfF 3442 48.82 0 4034539..4035558 - 339 145600765 - YPDSF_3518 - sugar transport system permease 3443 45.88 0 4035570..4037060 - 496 145600766 - YPDSF_3519 - sugar transport system ATP-binding protein 3444 46.50 0 4037146..4038102 - 318 145600767 - YPDSF_3520 - periplasmic protein precursor 3445 48.73 0 4044968..4045831 - 287 162202299 - YPDSF_3521 - glutamate racemase 3446 46.52 0 4045776..4047671 - 631 145600769 btuB YPDSF_3522 - vitamin B12/cobalamin outer membrane transporter 3447 47.74 0 4048133..4049236 + 367 145600770 - YPDSF_3523 - tRNA (uracil-5-)-methyltransferase 3448 46.81 0 4049370..4049777 - 135 145600771 - YPDSF_3524 - hypothetical protein 3449 51.57 0 4049790..4050425 - 211 145600772 - YPDSF_3525 - DNA-binding transcriptional repressor FabR 3450 48.47 0 4050643..4052043 + 466 145600773 - YPDSF_3526 - soluble pyridine nucleotide transhydrogenase 3451 48.80 0 4052026..4052943 - 305 145600774 - YPDSF_3527 - DNA-binding transcriptional regulator OxyR 3452 46.31 0 4053090..4053821 + 243 145600775 - YPDSF_3528 - peroxiredoxin/glutaredoxin family protein 3453 51.78 0 4053916..4055379 + 487 145600776 - YPDSF_3529 - dihydrolipoamide dehydrogenase 3454 47.26 0 4055495..4056298 - 267 145600777 - YPDSF_3530 - membrane protein 3455 48.68 0 4056363..4057691 - 442 145600778 - YPDSF_3531 - HlyD family secretion protein 3456 49.06 0 4057767..4059584 - 605 145600779 - YPDSF_3532 - ABC transporter protein 3457 42.23 -1 4059741..4060358 - 205 145600780 - YPDSF_3533 - hemophore HasA 3458 44.36 0 4060580..4063072 - 830 145600781 - YPDSF_3534 - TonB dependent receptor protein 3459 50.66 0 4063671..4065044 - 457 145600782 - YPDSF_3535 - argininosuccinate lyase 3460 50.97 0 4065211..4065987 - 258 145600783 - YPDSF_3536 - acetylglutamate kinase 3461 50.45 0 4066153..4067157 - 334 145600784 argC YPDSF_3537 - N-acetyl-gamma-glutamyl-phosphate reductase 3462 50.43 0 4067408..4068571 + 387 145600785 - YPDSF_3538 - acetylornithine deacetylase 3463 52.56 0 4068945..4071581 + 878 145600786 - YPDSF_3539 - phosphoenolpyruvate carboxylase 3464 62.96 +2 4071733..4071948 - 71 145600787 - YPDSF_3540 - hypothetical protein 3465 46.44 0 4072892..4073677 + 261 145600788 - YPDSF_3541 - transposase for insertion sequence IS1661 3466 48.52 0 4073740..4074009 - 89 145600789 rpsO YPDSF_3542 - 30S ribosomal protein S15 3467 49.44 0 4074132..4075106 - 324 145600790 truB YPDSF_3543 - tRNA pseudouridine synthase B 3468 44.53 0 4075106..4075516 - 136 145600791 rbfA YPDSF_3544 - ribosome-binding factor A 3469 49.72 0 4075582..4078260 - 892 145600792 infB YPDSF_3545 - translation initiation factor IF-2 3470 49.13 0 4078285..4079772 - 495 145600793 nusA YPDSF_3546 - transcription elongation factor NusA 3471 46.80 0 4079794..4080246 - 150 145600794 - YPDSF_3547 - hypothetical protein 3472 48.21 0 4080778..4081113 - 111 145600795 secG YPDSF_3548 - preprotein translocase subunit SecG 3473 47.65 0 4081336..4082676 - 446 145600796 glmM YPDSF_3549 - phosphoglucosamine mutase 3474 47.60 0 4082686..4083519 - 277 145600797 folP YPDSF_3550 - dihydropteroate synthase 3475 46.98 0 4083639..4085573 - 644 145600798 hflB YPDSF_3551 - ATP-dependent metalloprotease 3476 45.56 0 4085630..4086259 - 209 145600799 rrmJ YPDSF_3552 - 23S rRNA methyltransferase J 3477 43.54 0 4086406..4086699 + 97 145600800 - YPDSF_3553 - hypothetical protein 3478 42.35 -1 4086827..4087303 - 158 145600801 greA YPDSF_3554 - transcription elongation factor GreA 3479 48.24 0 4087561..4089009 + 482 145600802 - YPDSF_3555 - D-alanyl-D-alanine carboxypeptidase/endopeptidase 3480 49.32 0 4089015..4089677 + 220 145600803 - YPDSF_3556 - DNA-binding transcriptional regulator BasR 3481 46.82 0 4089674..4090741 + 355 145600804 - YPDSF_3557 - sensor protein BasS/PmrB 3482 48.93 0 4090836..4092008 - 390 145600805 obgE YPDSF_3558 - GTPase ObgE 3483 48.63 0 4092009..4092995 - 328 145600806 - YPDSF_3559 - hypothetical protein 3484 48.84 0 4093083..4093340 - 85 145600807 rpmA YPDSF_3560 - 50S ribosomal protein L27 3485 45.51 0 4093360..4093671 - 103 145600808 rplU YPDSF_3561 - 50S ribosomal protein L21 3486 48.97 0 4093931..4094902 + 323 145600809 - YPDSF_3562 - octaprenyl diphosphate synthase 3487 46.84 0 4094999..4095346 - 115 145600810 - YPDSF_3563 - hypothetical protein 3488 49.64 0 4095530..4095805 + 91 145600811 - YPDSF_3564 - DNA-binding protein 3489 47.71 0 4096239..4097177 - 312 145600812 - YPDSF_3565 - malate dehydrogenase 3490 45.22 0 4097641..4098111 + 156 145600813 - YPDSF_3566 - arginine repressor 3491 40.91 -1 4098500..4098763 + 87 145600814 - YPDSF_3567 - hypothetical protein 3492 50.04 0 4099059..4100441 - 460 145600815 - YPDSF_3568 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 3493 46.55 0 4100612..4101625 + 337 145600816 - YPDSF_3569 - fructose-1,6-bisphosphatase 3494 46.78 0 4101825..4102352 + 175 145600817 - YPDSF_3570 - inorganic pyrophosphatase 3495 45.94 0 4102470..4102826 - 118 145600818 - YPDSF_3571 - hypothetical protein 3496 52.35 0 4102829..4106725 - 1298 145600819 - YPDSF_3572 - hypothetical protein 3497 51.35 0 4106722..4108458 - 578 145600820 - YPDSF_3573 - hypothetical protein 3498 53.21 +1 4108733..4109371 + 212 145600821 - YPDSF_3574 - methionine sulfoxide reductase A 3499 46.25 0 4109630..4110961 + 443 145600822 - YPDSF_3575 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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