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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3375 48.15 0 3955227..3955847 + 206 145600698 rhtB YPDSF_3448 - homoserine/homoserine lactone efflux protein 3376 51.53 0 3955898..3956518 - 206 145600699 - YPDSF_3449 - threonine efflux system 3377 52.59 0 3956625..3958457 - 610 145600700 - YPDSF_3450 - ATP-dependent DNA helicase RecQ 3378 45.96 0 3958535..3959413 - 292 145600701 - YPDSF_3451 - phospholipase A 3379 48.41 0 3959635..3960105 + 156 145600702 - YPDSF_3452 - hypothetical protein 3380 51.85 0 3960192..3961082 + 296 145600703 - YPDSF_3453 - hypothetical protein 3381 50.47 0 3961180..3962130 - 316 145600704 - YPDSF_3454 - magnesium/nickel/cobalt transporter CorA 3382 50.77 0 3962779..3963621 - 280 145600705 - YPDSF_3455 - hypothetical protein 3383 51.81 0 3963635..3964852 - 405 145600706 - YPDSF_3456 - hypothetical protein 3384 49.20 0 3965280..3965966 + 228 145600707 - YPDSF_3457 - TetR family transcriptional regulator 3385 54.60 +1 3966080..3968242 - 720 145600708 uvrD YPDSF_3458 - DNA-dependent helicase II 3386 50.91 0 3968344..3969060 - 238 145600709 - YPDSF_3459 - flavin mononucleotide phosphatase 3387 53.62 +1 3969060..3969971 - 303 145600710 xerC YPDSF_3460 - site-specific tyrosine recombinase XerC 3388 53.05 +1 3969968..3970672 - 234 145600711 - YPDSF_3461 - hypothetical protein 3389 53.09 +1 3970737..3971561 - 274 145600712 dapF YPDSF_3462 - diaminopimelate epimerase 3390 52.91 +1 3971745..3971933 - 62 145600713 - YPDSF_3463 - lipoprotein 3391 48.29 0 3972085..3972405 + 106 145600714 cyaY YPDSF_3464 - frataxin-like protein 3392 49.28 0 3972649..3975201 - 850 145600715 cyaA YPDSF_3465 - adenylate cyclase 3393 39.05 -1 3975265..3975474 + 69 145600716 - YPDSF_3466 - hypothetical protein 3394 54.78 +1 3975695..3976636 + 313 145600717 hemC YPDSF_3467 - porphobilinogen deaminase 3395 51.20 0 3976633..3977382 + 249 145600718 hemD YPDSF_3468 - uroporphyrinogen-III synthase 3396 50.67 0 3977413..3978537 + 374 145600719 - YPDSF_3469 - putative uroporphyrinogen III C-methyltransferase 3397 52.58 0 3978540..3979760 + 406 145600720 - YPDSF_3470 - putative protoheme IX biogenesis protein 3398 45.75 0 3979953..3980411 - 152 145600721 - YPDSF_3471 - transposase for the IS1541 insertion element 3399 49.71 0 3981917..3983308 - 463 145600722 - YPDSF_3472 - putative transport protein YifK 3400 51.55 0 3983832..3984572 - 246 145600723 - YPDSF_3473 - putative UDP-N-acetyl-D-mannosaminuronic acid transferase 3401 48.21 0 3984581..3985945 - 454 145600724 - YPDSF_3474 - putative entero common antigen polymerase 3402 50.37 0 3985942..3987027 - 361 145600725 - YPDSF_3475 - 4-alpha-L-fucosyltransferase 3403 50.12 0 3987050..3988306 - 418 145600726 - YPDSF_3476 - lipopolysaccharide biosynthesis protein 3404 48.81 0 3988308..3989438 - 376 145600727 - YPDSF_3477 - TDP-4-oxo-6-deoxy-D-glucose transaminase 3405 50.59 0 3989440..3990204 - 254 145600728 - YPDSF_3478 - TDP-fucosamine acetyltransferase 3406 49.32 0 3990155..3991036 - 293 145600729 - YPDSF_3479 - glucose-1-phosphate thymidylyltransferase 3407 51.30 0 3991314..3992387 - 357 145600730 - YPDSF_3480 - dTDP-D-glucose-4,6-dehydratase 3408 49.80 0 3992378..3993640 - 420 145600731 wecC YPDSF_3481 - UDP-N-acetyl-D-mannosamine dehydrogenase 3409 50.30 0 3993637..3994821 - 394 145600732 - YPDSF_3482 - UDP-N-acetylglucosamine 2-epimerase 3410 48.38 0 3995099..3996175 - 358 145600733 - YPDSF_3483 - lipopolysaccharide biosynthesis protein WzzE 3411 46.91 0 3996196..3997278 - 360 145600734 - YPDSF_3484 - undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 3412 45.87 0 3997828..3999087 - 419 145600735 rho YPDSF_3485 - transcription termination factor Rho 3413 45.87 0 3999567..3999893 - 108 145600736 - YPDSF_3486 - thioredoxin 1 3414 48.64 0 4000012..4001298 + 428 145600737 - YPDSF_3487 - ATP-dependent RNA helicase RhlB 3415 50.63 0 4001302..4002798 + 498 145600738 - YPDSF_3488 - guanosine pentaphosphate phosphohydrolase 3416 48.71 0 4002966..4004987 - 673 145600739 - YPDSF_3489 - ATP-dependent DNA helicase Rep 3417 45.04 0 4005191..4005472 + 93 145600740 - YPDSF_3490 - peptidyl-prolyl cis-trans isomerase C 3418 34.09 -2 4005711..4006502 + 263 145600741 - YPDSF_3491 - hypothetical protein 3419 43.69 0 4007294..4007824 + 176 145600742 - YPDSF_3492 - fimbrial protein 3420 42.21 -1 4007888..4008619 + 243 145600743 - YPDSF_3493 - fimbrial chaperone 3421 47.11 0 4008647..4011274 + 875 145600744 - YPDSF_3494 - outer membrane usher protein 3422 49.13 0 4011279..4012658 + 459 145600745 - YPDSF_3495 - hypothetical protein 3423 48.23 0 4012624..4013442 + 272 145600746 - YPDSF_3496 - chaperone protein 3424 42.79 -1 4016741..4016941 - 66 145600747 - YPDSF_3500 - hypothetical protein 3425 50.30 0 4017122..4018600 - 492 145600748 - YPDSF_3501 - ketol-acid reductoisomerase 3426 52.72 0 4018886..4019767 + 293 145600749 - YPDSF_3502 - DNA-binding transcriptional regulator IlvY 3427 38.57 -1 4019822..4020031 - 69 145600750 - YPDSF_3503 - hypothetical protein 3428 36.46 -2 4020643..4020834 + 63 145600751 - YPDSF_3504 - hypothetical protein 3429 39.29 -1 4020927..4021598 + 223 145600752 - YPDSF_3505 - hypothetical protein 3430 34.20 -2 4021582..4022043 + 153 145600753 - YPDSF_3506 - membrane protein 3431 34.20 -2 4022123..4022584 + 153 145600754 - YPDSF_3507 - membrane protein 3432 33.12 -2 4022664..4023128 + 154 145600755 - YPDSF_3508 - membrane protein 3433 53.66 +1 4023259..4024803 - 514 145600756 - YPDSF_3509 - threonine dehydratase 3434 53.11 +1 4024809..4026659 - 616 145600757 - YPDSF_3510 - dihydroxy-acid dehydratase 3435 51.56 0 4026970..4027896 - 308 145600758 - YPDSF_3511 - branched-chain amino acid aminotransferase 3436 49.22 0 4027919..4028176 - 85 145600759 ilvM YPDSF_3512 - acetolactate synthase 2 regulatory subunit 3437 53.25 +1 4028173..4029819 - 548 145600760 - YPDSF_3513 - acetolactate synthase 2 catalytic subunit 3438 53.41 +1 4030442..4031965 + 507 145600761 - YPDSF_3514 - magnesium chelatase family protein 3439 48.94 0 4032222..4032644 - 140 145600762 - YPDSF_3515 - hypothetical protein 3440 47.51 0 4032679..4033560 + 293 145600763 - YPDSF_3516 - transcriptional regulator HdfR 3441 45.12 0 4033547..4034539 - 330 145600764 - YPDSF_3517 - inner membrane ABC transporter permease protein YjfF 3442 48.82 0 4034539..4035558 - 339 145600765 - YPDSF_3518 - sugar transport system permease 3443 45.88 0 4035570..4037060 - 496 145600766 - YPDSF_3519 - sugar transport system ATP-binding protein 3444 46.50 0 4037146..4038102 - 318 145600767 - YPDSF_3520 - periplasmic protein precursor 3445 48.73 0 4044968..4045831 - 287 162202299 - YPDSF_3521 - glutamate racemase 3446 46.52 0 4045776..4047671 - 631 145600769 btuB YPDSF_3522 - vitamin B12/cobalamin outer membrane transporter 3447 47.74 0 4048133..4049236 + 367 145600770 - YPDSF_3523 - tRNA (uracil-5-)-methyltransferase 3448 46.81 0 4049370..4049777 - 135 145600771 - YPDSF_3524 - hypothetical protein 3449 51.57 0 4049790..4050425 - 211 145600772 - YPDSF_3525 - DNA-binding transcriptional repressor FabR 3450 48.47 0 4050643..4052043 + 466 145600773 - YPDSF_3526 - soluble pyridine nucleotide transhydrogenase 3451 48.80 0 4052026..4052943 - 305 145600774 - YPDSF_3527 - DNA-binding transcriptional regulator OxyR 3452 46.31 0 4053090..4053821 + 243 145600775 - YPDSF_3528 - peroxiredoxin/glutaredoxin family protein 3453 51.78 0 4053916..4055379 + 487 145600776 - YPDSF_3529 - dihydrolipoamide dehydrogenase 3454 47.26 0 4055495..4056298 - 267 145600777 - YPDSF_3530 - membrane protein 3455 48.68 0 4056363..4057691 - 442 145600778 - YPDSF_3531 - HlyD family secretion protein 3456 49.06 0 4057767..4059584 - 605 145600779 - YPDSF_3532 - ABC transporter protein 3457 42.23 -1 4059741..4060358 - 205 145600780 - YPDSF_3533 - hemophore HasA 3458 44.36 0 4060580..4063072 - 830 145600781 - YPDSF_3534 - TonB dependent receptor protein 3459 50.66 0 4063671..4065044 - 457 145600782 - YPDSF_3535 - argininosuccinate lyase 3460 50.97 0 4065211..4065987 - 258 145600783 - YPDSF_3536 - acetylglutamate kinase 3461 50.45 0 4066153..4067157 - 334 145600784 argC YPDSF_3537 - N-acetyl-gamma-glutamyl-phosphate reductase 3462 50.43 0 4067408..4068571 + 387 145600785 - YPDSF_3538 - acetylornithine deacetylase 3463 52.56 0 4068945..4071581 + 878 145600786 - YPDSF_3539 - phosphoenolpyruvate carboxylase 3464 62.96 +2 4071733..4071948 - 71 145600787 - YPDSF_3540 - hypothetical protein 3465 46.44 0 4072892..4073677 + 261 145600788 - YPDSF_3541 - transposase for insertion sequence IS1661 3466 48.52 0 4073740..4074009 - 89 145600789 rpsO YPDSF_3542 - 30S ribosomal protein S15 3467 49.44 0 4074132..4075106 - 324 145600790 truB YPDSF_3543 - tRNA pseudouridine synthase B 3468 44.53 0 4075106..4075516 - 136 145600791 rbfA YPDSF_3544 - ribosome-binding factor A 3469 49.72 0 4075582..4078260 - 892 145600792 infB YPDSF_3545 - translation initiation factor IF-2 3470 49.13 0 4078285..4079772 - 495 145600793 nusA YPDSF_3546 - transcription elongation factor NusA 3471 46.80 0 4079794..4080246 - 150 145600794 - YPDSF_3547 - hypothetical protein 3472 48.21 0 4080778..4081113 - 111 145600795 secG YPDSF_3548 - preprotein translocase subunit SecG 3473 47.65 0 4081336..4082676 - 446 145600796 glmM YPDSF_3549 - phosphoglucosamine mutase 3474 47.60 0 4082686..4083519 - 277 145600797 folP YPDSF_3550 - dihydropteroate synthase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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