version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3327 49.53 0 3902026..3902556 - 176 145600650 - YPDSF_3400 - hypothetical protein 3328 48.68 0 3902828..3904639 - 603 145600651 - YPDSF_3401 - carbon starvation protein 3329 46.81 0 3905003..3905833 - 276 145600652 - YPDSF_3402 - hypothetical protein 3330 50.79 0 3905954..3906715 - 253 145600653 - YPDSF_3403 - uridine phosphorylase 3331 49.83 0 3907143..3908015 + 290 145600654 - YPDSF_3404 - carboxymethylenebutenolidase 3332 49.89 0 3908070..3910346 - 758 145600655 - YPDSF_3405 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3333 53.04 +1 3910452..3911405 + 317 145600656 - YPDSF_3406 - LysR family transcriptional regulator 3334 50.27 0 3911293..3912225 - 310 145600657 - YPDSF_3407 - membrane protein 3335 53.08 +1 3912545..3913501 - 318 145600658 - YPDSF_3408 - membrane protein 3336 54.53 +1 3913602..3914351 - 249 145600659 ugpQ YPDSF_3409 - cytoplasmic glycerophosphodiester phosphodiesterase 3337 52.42 0 3914348..3915421 - 357 145600660 ugpC YPDSF_3410 - glycerol-3-phosphate transporter ATP-binding subunit 3338 48.94 0 3915428..3916273 - 281 145600661 - YPDSF_3411 - glycerol-3-phosphate transporter membrane protein 3339 50.23 0 3916270..3917157 - 295 145600662 - YPDSF_3412 - glycerol-3-phosphate transporter permease 3340 46.89 0 3917455..3918774 - 439 145600663 - YPDSF_3413 - glycerol-3-phosphate transporter periplasmic binding protein 3341 40.07 -1 3919212..3919820 + 202 145600664 - YPDSF_3414 - hypothetical protein 3342 47.94 0 3920087..3922420 + 777 145600665 - YPDSF_3415 - hypothetical protein 3343 51.38 0 3922438..3923124 + 228 145600666 - YPDSF_3416 - hypothetical protein 3344 50.15 0 3923096..3923743 + 215 145600667 - YPDSF_3417 - hypothetical protein 3345 49.71 0 3923805..3924323 + 172 145600668 - YPDSF_3418 - hypothetical protein 3346 43.72 0 3924387..3925493 + 368 145600669 - YPDSF_3419 - hypothetical protein 3347 35.93 -2 3925608..3926069 - 153 145600670 - YPDSF_3420 - hypothetical protein 3348 49.04 0 3926297..3927028 - 243 145600671 livF YPDSF_3421 - leucine/isoleucine/valine transporter ATP-binding subunit 3349 53.52 +1 3927043..3927810 - 255 145600672 livG YPDSF_3422 - leucine/isoleucine/valine transporter ATP-binding subunit 3350 52.53 0 3927807..3929093 - 428 145600673 livM YPDSF_3423 - leucine/isoleucine/valine transporter permease subunit 3351 50.16 0 3929090..3930016 - 308 145600674 - YPDSF_3424 - branched-chain amino acid transporter permease subunit LivH 3352 50.09 0 3930197..3931312 - 371 145600675 - YPDSF_3425 - branched-chain amino acid-binding protein 3353 48.40 0 3931689..3932126 + 145 145600676 - YPDSF_3426 - acetyltransferase 3354 45.75 0 3932372..3932830 - 152 145600677 - YPDSF_3427 - transposase for the IS1541 insertion element 3355 50.35 0 3933044..3933901 - 285 145600678 - YPDSF_3428 - RNA polymerase factor sigma-32 3356 51.05 0 3934212..3935165 - 317 145600679 ftsX YPDSF_3429 - cell division protein FtsX 3357 53.51 +1 3935155..3935823 - 222 145600680 - YPDSF_3430 - cell division protein FtsE 3358 47.86 0 3935829..3937508 - 559 145600681 - YPDSF_3431 - cell division protein 3359 50.53 0 3937790..3938452 + 220 145600682 - YPDSF_3432 - 16S rRNA m(2)G966-methyltransferase 3360 41.03 -1 3938442..3938714 + 90 145600683 - YPDSF_3433 - hypothetical protein 3361 49.05 0 3938901..3939320 - 139 145600684 - YPDSF_3434 - hypothetical protein 3362 37.69 -2 3939532..3939852 - 106 145600685 - YPDSF_3435 - hypothetical protein 3363 50.88 0 3940142..3940768 + 208 145600686 - YPDSF_3436 - hypothetical protein 3364 52.72 0 3941182..3943548 + 788 145600687 zntA YPDSF_3437 - zinc/cadmium/mercury/lead-transporting ATPase 3365 46.72 0 3943648..3944043 - 131 145600688 - YPDSF_3438 - cell developmental protein SirA 3366 48.58 0 3944186..3944854 + 222 145600689 - YPDSF_3439 - hypothetical protein 3367 47.73 0 3944984..3945511 + 175 145600690 - YPDSF_3440 - hypothetical protein 3368 48.92 0 3945673..3946968 - 431 145600691 glpC YPDSF_3441 - sn-glycerol-3-phosphate dehydrogenase subunit C 3369 52.39 0 3946965..3948239 - 424 145600692 - YPDSF_3442 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 3370 53.99 +1 3948229..3949884 - 551 145600693 glpA YPDSF_3443 - sn-glycerol-3-phosphate dehydrogenase subunit A 3371 45.34 0 3950509..3951624 + 371 145600694 glpQ YPDSF_3444 - glycerophosphodiester phosphodiesterase 3372 39.17 -1 3951698..3952897 - 399 145600695 - YPDSF_3445 - hypothetical protein 3373 48.88 0 3953174..3954151 - 325 145600696 - YPDSF_3446 - putative sugar phosphatase 3374 51.81 0 3954018..3955013 - 331 145600697 - YPDSF_3447 - lysophospholipase L2 3375 48.15 0 3955227..3955847 + 206 145600698 rhtB YPDSF_3448 - homoserine/homoserine lactone efflux protein 3376 51.53 0 3955898..3956518 - 206 145600699 - YPDSF_3449 - threonine efflux system 3377 52.59 0 3956625..3958457 - 610 145600700 - YPDSF_3450 - ATP-dependent DNA helicase RecQ 3378 45.96 0 3958535..3959413 - 292 145600701 - YPDSF_3451 - phospholipase A 3379 48.41 0 3959635..3960105 + 156 145600702 - YPDSF_3452 - hypothetical protein 3380 51.85 0 3960192..3961082 + 296 145600703 - YPDSF_3453 - hypothetical protein 3381 50.47 0 3961180..3962130 - 316 145600704 - YPDSF_3454 - magnesium/nickel/cobalt transporter CorA 3382 50.77 0 3962779..3963621 - 280 145600705 - YPDSF_3455 - hypothetical protein 3383 51.81 0 3963635..3964852 - 405 145600706 - YPDSF_3456 - hypothetical protein 3384 49.20 0 3965280..3965966 + 228 145600707 - YPDSF_3457 - TetR family transcriptional regulator 3385 54.60 +1 3966080..3968242 - 720 145600708 uvrD YPDSF_3458 - DNA-dependent helicase II 3386 50.91 0 3968344..3969060 - 238 145600709 - YPDSF_3459 - flavin mononucleotide phosphatase 3387 53.62 +1 3969060..3969971 - 303 145600710 xerC YPDSF_3460 - site-specific tyrosine recombinase XerC 3388 53.05 +1 3969968..3970672 - 234 145600711 - YPDSF_3461 - hypothetical protein 3389 53.09 +1 3970737..3971561 - 274 145600712 dapF YPDSF_3462 - diaminopimelate epimerase 3390 52.91 +1 3971745..3971933 - 62 145600713 - YPDSF_3463 - lipoprotein 3391 48.29 0 3972085..3972405 + 106 145600714 cyaY YPDSF_3464 - frataxin-like protein 3392 49.28 0 3972649..3975201 - 850 145600715 cyaA YPDSF_3465 - adenylate cyclase 3393 39.05 -1 3975265..3975474 + 69 145600716 - YPDSF_3466 - hypothetical protein 3394 54.78 +1 3975695..3976636 + 313 145600717 hemC YPDSF_3467 - porphobilinogen deaminase 3395 51.20 0 3976633..3977382 + 249 145600718 hemD YPDSF_3468 - uroporphyrinogen-III synthase 3396 50.67 0 3977413..3978537 + 374 145600719 - YPDSF_3469 - putative uroporphyrinogen III C-methyltransferase 3397 52.58 0 3978540..3979760 + 406 145600720 - YPDSF_3470 - putative protoheme IX biogenesis protein 3398 45.75 0 3979953..3980411 - 152 145600721 - YPDSF_3471 - transposase for the IS1541 insertion element 3399 49.71 0 3981917..3983308 - 463 145600722 - YPDSF_3472 - putative transport protein YifK 3400 51.55 0 3983832..3984572 - 246 145600723 - YPDSF_3473 - putative UDP-N-acetyl-D-mannosaminuronic acid transferase 3401 48.21 0 3984581..3985945 - 454 145600724 - YPDSF_3474 - putative entero common antigen polymerase 3402 50.37 0 3985942..3987027 - 361 145600725 - YPDSF_3475 - 4-alpha-L-fucosyltransferase 3403 50.12 0 3987050..3988306 - 418 145600726 - YPDSF_3476 - lipopolysaccharide biosynthesis protein 3404 48.81 0 3988308..3989438 - 376 145600727 - YPDSF_3477 - TDP-4-oxo-6-deoxy-D-glucose transaminase 3405 50.59 0 3989440..3990204 - 254 145600728 - YPDSF_3478 - TDP-fucosamine acetyltransferase 3406 49.32 0 3990155..3991036 - 293 145600729 - YPDSF_3479 - glucose-1-phosphate thymidylyltransferase 3407 51.30 0 3991314..3992387 - 357 145600730 - YPDSF_3480 - dTDP-D-glucose-4,6-dehydratase 3408 49.80 0 3992378..3993640 - 420 145600731 wecC YPDSF_3481 - UDP-N-acetyl-D-mannosamine dehydrogenase 3409 50.30 0 3993637..3994821 - 394 145600732 - YPDSF_3482 - UDP-N-acetylglucosamine 2-epimerase 3410 48.38 0 3995099..3996175 - 358 145600733 - YPDSF_3483 - lipopolysaccharide biosynthesis protein WzzE 3411 46.91 0 3996196..3997278 - 360 145600734 - YPDSF_3484 - undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 3412 45.87 0 3997828..3999087 - 419 145600735 rho YPDSF_3485 - transcription termination factor Rho 3413 45.87 0 3999567..3999893 - 108 145600736 - YPDSF_3486 - thioredoxin 1 3414 48.64 0 4000012..4001298 + 428 145600737 - YPDSF_3487 - ATP-dependent RNA helicase RhlB 3415 50.63 0 4001302..4002798 + 498 145600738 - YPDSF_3488 - guanosine pentaphosphate phosphohydrolase 3416 48.71 0 4002966..4004987 - 673 145600739 - YPDSF_3489 - ATP-dependent DNA helicase Rep 3417 45.04 0 4005191..4005472 + 93 145600740 - YPDSF_3490 - peptidyl-prolyl cis-trans isomerase C 3418 34.09 -2 4005711..4006502 + 263 145600741 - YPDSF_3491 - hypothetical protein 3419 43.69 0 4007294..4007824 + 176 145600742 - YPDSF_3492 - fimbrial protein 3420 42.21 -1 4007888..4008619 + 243 145600743 - YPDSF_3493 - fimbrial chaperone 3421 47.11 0 4008647..4011274 + 875 145600744 - YPDSF_3494 - outer membrane usher protein 3422 49.13 0 4011279..4012658 + 459 145600745 - YPDSF_3495 - hypothetical protein 3423 48.23 0 4012624..4013442 + 272 145600746 - YPDSF_3496 - chaperone protein 3424 42.79 -1 4016741..4016941 - 66 145600747 - YPDSF_3500 - hypothetical protein 3425 50.30 0 4017122..4018600 - 492 145600748 - YPDSF_3501 - ketol-acid reductoisomerase 3426 52.72 0 4018886..4019767 + 293 145600749 - YPDSF_3502 - DNA-binding transcriptional regulator IlvY 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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