version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3293 52.30 0 3856035..3857057 - 340 145600616 dppD YPDSF_3366 - dipeptide transporter ATP-binding subunit 3294 53.51 +1 3857124..3857921 - 265 145600617 - YPDSF_3367 - dipeptide transport system permease protein 3295 52.55 0 3857932..3858951 - 339 145600618 - YPDSF_3368 - dipeptide transporter permease DppB 3296 48.69 0 3859234..3860841 - 535 145600619 - YPDSF_3369 - periplasmic dipeptide transport protein 3297 46.67 0 3861510..3863189 - 559 145600620 - YPDSF_3370 - hemolysin activator protein 3298 38.29 -2 3863383..3864774 - 463 145600621 - YPDSF_3371 - hypothetical protein 3299 47.37 0 3865280..3866611 - 443 145600622 - YPDSF_3372 - regulatory protein UhpC 3300 49.02 0 3866706..3868235 - 509 145600623 - YPDSF_3373 - sensory histidine kinase UhpB 3301 50.76 0 3868232..3868822 - 196 145600624 - YPDSF_3374 - two-component system response regulator 3302 44.56 0 3868938..3870629 - 563 145600625 - YPDSF_3375 - phosphoethanolamine transferase 3303 50.38 0 3870700..3871479 - 259 145600626 - YPDSF_3376 - transposase/IS protein 3304 52.79 0 3871479..3872501 - 340 145600627 - YPDSF_3377 - transposase 3305 43.84 0 3872591..3873142 + 183 145600628 - YPDSF_3378 - acetyltransferase 3306 39.85 -1 3873353..3874303 + 316 145600629 - YPDSF_3379 - pantothenate kinase 3307 40.62 -1 3874338..3875297 - 319 145600630 - YPDSF_3380 - biotin--protein ligase 3308 43.55 0 3875294..3876331 - 345 145600631 murB YPDSF_3381 - UDP-N-acetylenolpyruvoylglucosamine reductase 3309 42.88 -1 3882468..3883001 - 177 145600632 hemG YPDSF_3382 - protoporphyrinogen oxidase 3310 46.56 0 3883023..3884474 - 483 145600633 - YPDSF_3383 - potassium transporter 3311 46.08 0 3884514..3885125 - 203 145600634 - YPDSF_3384 - hypothetical protein 3312 45.35 0 3885125..3886456 - 443 145600635 - YPDSF_3385 - proline dipeptidase 3313 47.67 0 3886783..3888972 + 729 145600636 fadB YPDSF_3386 - multifunctional fatty acid oxidation complex subunit alpha 3314 49.40 0 3888984..3890147 + 387 145600637 fadA YPDSF_3387 - 3-ketoacyl-CoA thiolase 3315 48.72 0 3890307..3891008 - 233 145600638 fre YPDSF_3388 - FMN reductase 3316 48.72 0 3891063..3892583 - 506 145600639 - YPDSF_3389 - 3-octaprenyl-4-hydroxybenzoate decarboxylase 3317 44.17 0 3892807..3893295 + 162 145600640 rfaH YPDSF_3390 - transcriptional activator RfaH 3318 47.70 0 3893405..3894427 - 340 145600641 - YPDSF_3391 - delta-aminolevulinic acid dehydratase 3319 48.66 0 3894442..3895224 - 260 145600642 - YPDSF_3392 - DNase TatD 3320 44.92 0 3895280..3896056 - 258 145600643 - YPDSF_3393 - TatABCE protein translocation system subunit 3321 50.53 0 3896059..3896721 - 220 145600644 - YPDSF_3394 - Sec-independent protein translocase protein TatB 3322 43.82 0 3896725..3896991 - 88 145600645 - YPDSF_3395 - Sec-independent protein translocase protein TatA 3323 46.02 0 3897171..3898802 - 543 145600646 ubiB YPDSF_3396 - putative ubiquinone biosynthesis protein UbiB 3324 45.31 0 3898802..3899452 - 216 145600647 - YPDSF_3397 - hypothetical protein 3325 44.84 0 3899466..3900221 - 251 145600648 ubiE YPDSF_3398 - ubiquinone/menaquinone biosynthesis methyltransferase 3326 46.81 0 3900313..3901818 - 501 145600649 - YPDSF_3399 - DNA recombination protein 3327 49.53 0 3902026..3902556 - 176 145600650 - YPDSF_3400 - hypothetical protein 3328 48.68 0 3902828..3904639 - 603 145600651 - YPDSF_3401 - carbon starvation protein 3329 46.81 0 3905003..3905833 - 276 145600652 - YPDSF_3402 - hypothetical protein 3330 50.79 0 3905954..3906715 - 253 145600653 - YPDSF_3403 - uridine phosphorylase 3331 49.83 0 3907143..3908015 + 290 145600654 - YPDSF_3404 - carboxymethylenebutenolidase 3332 49.89 0 3908070..3910346 - 758 145600655 - YPDSF_3405 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 3333 53.04 +1 3910452..3911405 + 317 145600656 - YPDSF_3406 - LysR family transcriptional regulator 3334 50.27 0 3911293..3912225 - 310 145600657 - YPDSF_3407 - membrane protein 3335 53.08 +1 3912545..3913501 - 318 145600658 - YPDSF_3408 - membrane protein 3336 54.53 +1 3913602..3914351 - 249 145600659 ugpQ YPDSF_3409 - cytoplasmic glycerophosphodiester phosphodiesterase 3337 52.42 0 3914348..3915421 - 357 145600660 ugpC YPDSF_3410 - glycerol-3-phosphate transporter ATP-binding subunit 3338 48.94 0 3915428..3916273 - 281 145600661 - YPDSF_3411 - glycerol-3-phosphate transporter membrane protein 3339 50.23 0 3916270..3917157 - 295 145600662 - YPDSF_3412 - glycerol-3-phosphate transporter permease 3340 46.89 0 3917455..3918774 - 439 145600663 - YPDSF_3413 - glycerol-3-phosphate transporter periplasmic binding protein 3341 40.07 -1 3919212..3919820 + 202 145600664 - YPDSF_3414 - hypothetical protein 3342 47.94 0 3920087..3922420 + 777 145600665 - YPDSF_3415 - hypothetical protein 3343 51.38 0 3922438..3923124 + 228 145600666 - YPDSF_3416 - hypothetical protein 3344 50.15 0 3923096..3923743 + 215 145600667 - YPDSF_3417 - hypothetical protein 3345 49.71 0 3923805..3924323 + 172 145600668 - YPDSF_3418 - hypothetical protein 3346 43.72 0 3924387..3925493 + 368 145600669 - YPDSF_3419 - hypothetical protein 3347 35.93 -2 3925608..3926069 - 153 145600670 - YPDSF_3420 - hypothetical protein 3348 49.04 0 3926297..3927028 - 243 145600671 livF YPDSF_3421 - leucine/isoleucine/valine transporter ATP-binding subunit 3349 53.52 +1 3927043..3927810 - 255 145600672 livG YPDSF_3422 - leucine/isoleucine/valine transporter ATP-binding subunit 3350 52.53 0 3927807..3929093 - 428 145600673 livM YPDSF_3423 - leucine/isoleucine/valine transporter permease subunit 3351 50.16 0 3929090..3930016 - 308 145600674 - YPDSF_3424 - branched-chain amino acid transporter permease subunit LivH 3352 50.09 0 3930197..3931312 - 371 145600675 - YPDSF_3425 - branched-chain amino acid-binding protein 3353 48.40 0 3931689..3932126 + 145 145600676 - YPDSF_3426 - acetyltransferase 3354 45.75 0 3932372..3932830 - 152 145600677 - YPDSF_3427 - transposase for the IS1541 insertion element 3355 50.35 0 3933044..3933901 - 285 145600678 - YPDSF_3428 - RNA polymerase factor sigma-32 3356 51.05 0 3934212..3935165 - 317 145600679 ftsX YPDSF_3429 - cell division protein FtsX 3357 53.51 +1 3935155..3935823 - 222 145600680 - YPDSF_3430 - cell division protein FtsE 3358 47.86 0 3935829..3937508 - 559 145600681 - YPDSF_3431 - cell division protein 3359 50.53 0 3937790..3938452 + 220 145600682 - YPDSF_3432 - 16S rRNA m(2)G966-methyltransferase 3360 41.03 -1 3938442..3938714 + 90 145600683 - YPDSF_3433 - hypothetical protein 3361 49.05 0 3938901..3939320 - 139 145600684 - YPDSF_3434 - hypothetical protein 3362 37.69 -2 3939532..3939852 - 106 145600685 - YPDSF_3435 - hypothetical protein 3363 50.88 0 3940142..3940768 + 208 145600686 - YPDSF_3436 - hypothetical protein 3364 52.72 0 3941182..3943548 + 788 145600687 zntA YPDSF_3437 - zinc/cadmium/mercury/lead-transporting ATPase 3365 46.72 0 3943648..3944043 - 131 145600688 - YPDSF_3438 - cell developmental protein SirA 3366 48.58 0 3944186..3944854 + 222 145600689 - YPDSF_3439 - hypothetical protein 3367 47.73 0 3944984..3945511 + 175 145600690 - YPDSF_3440 - hypothetical protein 3368 48.92 0 3945673..3946968 - 431 145600691 glpC YPDSF_3441 - sn-glycerol-3-phosphate dehydrogenase subunit C 3369 52.39 0 3946965..3948239 - 424 145600692 - YPDSF_3442 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 3370 53.99 +1 3948229..3949884 - 551 145600693 glpA YPDSF_3443 - sn-glycerol-3-phosphate dehydrogenase subunit A 3371 45.34 0 3950509..3951624 + 371 145600694 glpQ YPDSF_3444 - glycerophosphodiester phosphodiesterase 3372 39.17 -1 3951698..3952897 - 399 145600695 - YPDSF_3445 - hypothetical protein 3373 48.88 0 3953174..3954151 - 325 145600696 - YPDSF_3446 - putative sugar phosphatase 3374 51.81 0 3954018..3955013 - 331 145600697 - YPDSF_3447 - lysophospholipase L2 3375 48.15 0 3955227..3955847 + 206 145600698 rhtB YPDSF_3448 - homoserine/homoserine lactone efflux protein 3376 51.53 0 3955898..3956518 - 206 145600699 - YPDSF_3449 - threonine efflux system 3377 52.59 0 3956625..3958457 - 610 145600700 - YPDSF_3450 - ATP-dependent DNA helicase RecQ 3378 45.96 0 3958535..3959413 - 292 145600701 - YPDSF_3451 - phospholipase A 3379 48.41 0 3959635..3960105 + 156 145600702 - YPDSF_3452 - hypothetical protein 3380 51.85 0 3960192..3961082 + 296 145600703 - YPDSF_3453 - hypothetical protein 3381 50.47 0 3961180..3962130 - 316 145600704 - YPDSF_3454 - magnesium/nickel/cobalt transporter CorA 3382 50.77 0 3962779..3963621 - 280 145600705 - YPDSF_3455 - hypothetical protein 3383 51.81 0 3963635..3964852 - 405 145600706 - YPDSF_3456 - hypothetical protein 3384 49.20 0 3965280..3965966 + 228 145600707 - YPDSF_3457 - TetR family transcriptional regulator 3385 54.60 +1 3966080..3968242 - 720 145600708 uvrD YPDSF_3458 - DNA-dependent helicase II 3386 50.91 0 3968344..3969060 - 238 145600709 - YPDSF_3459 - flavin mononucleotide phosphatase 3387 53.62 +1 3969060..3969971 - 303 145600710 xerC YPDSF_3460 - site-specific tyrosine recombinase XerC 3388 53.05 +1 3969968..3970672 - 234 145600711 - YPDSF_3461 - hypothetical protein 3389 53.09 +1 3970737..3971561 - 274 145600712 dapF YPDSF_3462 - diaminopimelate epimerase 3390 52.91 +1 3971745..3971933 - 62 145600713 - YPDSF_3463 - lipoprotein 3391 48.29 0 3972085..3972405 + 106 145600714 cyaY YPDSF_3464 - frataxin-like protein 3392 49.28 0 3972649..3975201 - 850 145600715 cyaA YPDSF_3465 - adenylate cyclase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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