version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2856 50.38 0 3316153..3316932 - 259 145600179 - YPDSF_2920 - transposase/IS protein 2857 52.79 0 3316932..3317954 - 340 145600180 - YPDSF_2921 - transposase 2858 45.75 0 3318064..3318522 + 152 145600181 - YPDSF_2922 - transposase for the IS1541 insertion element 2859 46.38 0 3318712..3318918 - 68 145600182 - YPDSF_2923 - zinc-binding protein 2860 45.29 0 3319104..3319856 - 250 145600183 - YPDSF_2924 - hypothetical protein 2861 47.02 0 3319853..3320473 - 206 145600184 coaE YPDSF_2925 - dephospho-CoA kinase 2862 47.22 0 3320769..3321812 + 347 145600185 - YPDSF_2926 - guanosine 5'-monophosphate oxidoreductase 2863 45.21 0 3322207..3323343 - 378 145600186 - YPDSF_2927 - type IV pilin biogenesis protein 2864 46.05 0 3323403..3324959 - 518 145600187 - YPDSF_2928 - hypothetical protein 2865 44.73 0 3324934..3325398 - 154 145600188 - YPDSF_2929 - putative major pilin subunit 2866 48.31 0 3325601..3326548 - 315 145600189 - YPDSF_2930 - quinolinate phosphoribosyltransferase 2867 48.73 0 3326622..3327173 + 183 145600190 - YPDSF_2931 - N-acetyl-anhydromuranmyl-L-alanine amidase 2868 48.19 0 3327463..3328317 + 284 145600191 - YPDSF_2932 - regulatory protein AmpE 2869 48.43 0 3328750..3330147 - 465 145600192 - YPDSF_2933 - aromatic amino acid transport protein 2870 51.11 0 3331010..3331774 + 254 145600193 pdhR YPDSF_2934 - transcriptional regulator PdhR 2871 49.59 0 3331970..3334633 + 887 145600194 aceE YPDSF_2935 - pyruvate dehydrogenase subunit E1 2872 51.63 0 3334647..3336176 + 509 145600195 - YPDSF_2936 - dihydrolipoamide acetyltransferase 2873 42.59 -1 3336194..3336355 + 53 145600196 - YPDSF_2937 - hypothetical protein 2874 48.84 0 3336482..3337906 + 474 145600197 - YPDSF_2938 - dihydrolipoamide dehydrogenase 2875 45.97 0 3338149..3338607 + 152 145600198 - YPDSF_2939 - transposase for the IS1541 insertion element 2876 51.90 0 3339255..3341774 + 839 145600199 - YPDSF_2940 - bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 2877 46.11 0 3342073..3342432 + 119 145600200 - YPDSF_2941 - hypothetical protein 2878 54.02 +1 3342543..3343451 - 302 145600201 - YPDSF_2942 - hypothetical protein 2879 45.91 0 3343889..3344683 - 264 145600202 - YPDSF_2943 - S-adenosylmethionine decarboxylase 2880 48.48 0 3344761..3345651 - 296 145600203 - YPDSF_2944 - spermidine synthase 2881 42.82 -1 3345768..3346115 - 115 145600204 - YPDSF_2945 - hypothetical protein 2882 53.25 +1 3346432..3348033 + 533 145600205 - YPDSF_2946 - multicopper oxidase 2883 47.62 0 3348244..3348789 + 181 145600206 - YPDSF_2947 - hypoxanthine phosphoribosyltransferase 2884 44.63 0 3348943..3349818 - 291 145600207 - YPDSF_2948 - carbonic anhydrase 2885 47.68 0 3349841..3350767 + 308 145600208 - YPDSF_2949 - ABC transporter, ATP-binding protein 2886 48.12 0 3350764..3351534 + 256 145600209 - YPDSF_2950 - ABC transporter, integral membrane protein 2887 40.12 -1 3351741..3352079 + 112 145600210 - YPDSF_2951 - hypothetical protein 2888 43.24 -1 3351976..3353055 + 359 145600211 - YPDSF_2952 - hypothetical protein 2889 47.77 0 3353204..3353584 - 126 145600212 - YPDSF_2953 - aspartate alpha-decarboxylase 2890 53.10 +1 3353995..3354849 - 284 145600213 panC YPDSF_2954 - pantoate--beta-alanine ligase 2891 52.13 0 3354937..3355734 - 265 145600214 panB YPDSF_2955 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2892 52.92 +1 3356003..3356482 - 159 145600215 - YPDSF_2956 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2893 52.37 0 3356490..3357965 - 491 145600216 pcnB YPDSF_2957 - poly(A) polymerase I 2894 50.13 0 3358054..3359208 - 384 145600217 - YPDSF_2958 - glutamyl-Q tRNA(Asp) synthetase 2895 49.78 0 3359316..3359771 - 151 145600218 - YPDSF_2959 - DnaK transcriptional regulator DksA 2896 46.23 0 3359941..3360801 - 286 145600219 - YPDSF_2960 - sugar fermentation stimulation protein A 2897 56.60 +1 3360791..3361366 - 191 145600220 - YPDSF_2961 - 2'-5' RNA ligase 2898 56.79 +1 3361458..3363947 + 829 145600221 - YPDSF_2962 - ATP-dependent RNA helicase HrpB 2899 53.37 +1 3364056..3366530 + 824 145600222 mrcB YPDSF_2963 - penicillin-binding protein 1b 2900 50.41 0 3367647..3368735 + 362 145600223 - YPDSF_2966 - iron-hydroxamate transporter substrate-binding subunit 2901 54.90 +1 3368732..3370729 + 665 145600224 - YPDSF_2967 - iron-hydroxamate transporter permease subunit 2902 50.90 0 3371103..3372383 - 426 145600225 - YPDSF_2968 - glutamate-1-semialdehyde aminotransferase 2903 50.31 0 3372764..3374200 + 478 145600226 - YPDSF_2969 - chloride channel protein 2904 44.06 0 3374336..3374680 + 114 145600227 - YPDSF_2970 - iron-sulfur cluster insertion protein ErpA 2905 45.10 0 3374735..3374836 - 33 145600228 - YPDSF_2971 - hypothetical protein 2906 50.57 0 3374982..3375596 - 204 145600229 - YPDSF_2972 - hypothetical protein 2907 53.62 +1 3375596..3376438 - 280 145600230 - YPDSF_2973 - vitamin B12-transporter protein BtuF 2908 51.00 0 3376438..3377139 - 233 145600231 - YPDSF_2974 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2909 43.13 -1 3377433..3378953 + 506 145600232 dgt YPDSF_2975 - deoxyguanosinetriphosphate triphosphohydrolase 2910 49.86 0 3379151..3380596 + 481 145600233 - YPDSF_2976 - serine endoprotease 2911 47.40 0 3380755..3383547 - 930 145600234 - YPDSF_2977 - hybrid sensory histidine kinase BarA 2912 49.18 0 3383658..3383840 + 60 145600235 - YPDSF_2978 - hypothetical protein 2913 50.79 0 3383856..3383981 + 41 145600236 - YPDSF_2979 - hypothetical protein 2914 50.92 0 3383991..3386225 + 744 145600237 relA YPDSF_2980 - GDP/GTP pyrophosphokinase 2915 50.42 0 3386427..3387269 + 280 145600238 mazG YPDSF_2981 - nucleoside triphosphate pyrophosphohydrolase 2916 48.66 0 3387481..3389118 + 545 145600239 - YPDSF_2982 - CTP synthetase 2917 48.77 0 3389193..3390488 + 431 145600240 eno YPDSF_2983 - phosphopyruvate hydratase 2918 50.50 0 3390860..3391465 + 201 145600241 - YPDSF_2984 - superoxide dismutase (Cu-Zn) precursor 2919 49.11 0 3391569..3392240 + 223 145600242 - YPDSF_2985 - hypothetical protein 2920 47.50 0 3392474..3392833 - 119 145600243 - YPDSF_2986 - 6-pyruvoyl tetrahydrobiopterin synthase family protein 2921 52.20 0 3393226..3395064 + 612 145600244 cysJ YPDSF_2987 - sulfite reductase subunit alpha 2922 50.55 0 3395064..3396794 + 576 145600245 - YPDSF_2988 - sulfite reductase subunit beta 2923 50.64 0 3396791..3397258 + 155 145600246 - YPDSF_2989 - hypothetical protein 2924 49.47 0 3397233..3397517 + 94 145600247 - YPDSF_2990 - phosphoadenylyl-sulfate reductase (thioredoxin) 2925 45.07 0 3397576..3398052 - 158 145600248 - YPDSF_2991 - hypothetical protein 2926 43.28 0 3398158..3398358 - 66 145600249 - YPDSF_2992 - hypothetical protein 2927 55.67 +1 3398949..3400367 + 472 145600250 - YPDSF_2993 - siroheme synthase 2928 49.17 0 3400378..3401286 + 302 145600251 - YPDSF_2994 - sulfate adenylyltransferase subunit 2 2929 50.40 0 3401298..3402815 + 505 145600252 cysN YPDSF_2995 - sulfate adenylyltransferase subunit 1 2930 50.16 0 3402817..3403458 + 213 145600253 - YPDSF_2996 - adenylylsulfate kinase 2931 50.00 0 3403649..3403966 + 105 145600254 - YPDSF_2997 - hypothetical protein 2932 46.11 0 3404281..3404601 + 106 145600255 ftsB YPDSF_2998 - cell division protein FtsB 2933 50.69 0 3404605..3405330 + 241 145600256 ispD YPDSF_2999 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2934 48.26 0 3405469..3405957 + 162 145600257 ispF YPDSF_3000 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2935 49.43 0 3405968..3407017 + 349 145600258 truD YPDSF_3001 - tRNA pseudouridine synthase D 2936 50.72 0 3406995..3407759 + 254 145600259 surE YPDSF_3002 - stationary phase survival protein SurE 2937 49.60 0 3407753..3408379 + 208 145600260 pcm YPDSF_3003 - protein-L-isoaspartate O-methyltransferase 2938 47.80 0 3408483..3409484 + 333 145600261 - YPDSF_3004 - lipoprotein NlpD 2939 47.45 0 3409539..3410537 + 332 145600262 - YPDSF_3005 - RNA polymerase sigma factor RpoS 2940 50.94 0 3410865..3413420 - 851 145600263 - YPDSF_3006 - DNA mismatch repair protein 2941 45.93 0 3413917..3414051 + 44 145600264 - YPDSF_3007 - hypothetical protein 2942 46.27 0 3414214..3414669 - 151 145600265 - YPDSF_3008 - ribose-5-phosphate isomerase B 2943 48.92 0 3415152..3416267 + 371 145600266 - YPDSF_3009 - Zinc-binding dehydrogenase 2944 49.94 0 3416331..3417101 + 256 145600267 - YPDSF_3010 - short chain dehydrogenase 2945 49.70 0 3417188..3418189 + 333 145600268 - YPDSF_3011 - dihydroxyacetone kinase 2946 50.67 0 3418196..3418870 + 224 145600269 - YPDSF_3012 - hypothetical protein 2947 50.00 0 3418991..3419962 - 323 145600270 - YPDSF_3013 - transcriptional regulatory protein 2948 50.47 0 3420517..3421806 - 429 145600271 - YPDSF_3014 - arsenical pump membrane protein 2949 48.54 0 3421891..3422232 - 113 145600272 - YPDSF_3015 - DNA-binding transcriptional repressor ArsR 2950 31.88 -2 3422953..3423159 - 68 145600273 - YPDSF_3016 - hypothetical protein 2951 43.27 0 3423580..3424344 - 254 145600274 - YPDSF_3017 - extracellular solute-binding protein 2952 46.59 0 3424415..3425794 - 459 145600275 - YPDSF_3018 - cytochrome C peroxidase 2953 40.85 -1 3426031..3426336 - 101 145600276 - YPDSF_3019 - hypothetical protein 2954 47.45 0 3426455..3428551 + 698 145600277 - YPDSF_3020 - hypothetical protein 2955 40.07 -1 3428984..3430171 + 395 145600278 - YPDSF_3021 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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