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Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2524 50.99 0 2930114..2931280 - 388 145599847 sucC YPDSF_2582 - succinyl-CoA synthetase subunit beta 2525 48.77 0 2931393..2932616 - 407 145599848 - YPDSF_2583 - dihydrolipoamide acetyltransferase 2526 49.36 0 2932646..2935453 - 935 145599849 kgd YPDSF_2584 - alpha-ketoglutarate decarboxylase 2527 46.72 0 2935809..2936525 - 238 145599850 sdhB YPDSF_2585 - succinate dehydrogenase iron-sulfur subunit 2528 51.22 0 2936575..2938341 - 588 145599851 sdhA YPDSF_2586 - succinate dehydrogenase flavoprotein subunit 2529 45.69 0 2938342..2938689 - 115 145599852 sdhD YPDSF_2587 - succinate dehydrogenase cytochrome b556 small membrane subunit 2530 45.90 0 2938683..2939072 - 129 145599853 sdhC YPDSF_2588 - succinate dehydrogenase cytochrome b556 large membrane subunit 2531 48.56 0 2939782..2941062 + 426 145599854 gltA YPDSF_2589 - type II citrate synthase 2532 47.50 0 2941170..2941748 - 192 145599855 - YPDSF_2590 - heat shock protein GrpE 2533 47.05 0 2941872..2942753 + 293 145599856 ppnK YPDSF_2591 - inorganic polyphosphate/ATP-NAD kinase 2534 46.21 0 2942840..2944501 + 553 145599857 - YPDSF_2592 - recombination and repair protein 2535 45.91 0 2944615..2944956 + 113 145599858 - YPDSF_2593 - hypothetical protein 2536 47.37 0 2945106..2945390 - 94 145599859 - YPDSF_2594 - hypothetical protein 2537 43.45 0 2945383..2945817 - 144 145599860 - YPDSF_2595 - hypothetical protein 2538 45.86 0 2945966..2946460 + 164 145599861 smpB YPDSF_2596 - SsrA-binding protein 2539 45.75 0 2947095..2947553 + 152 145599862 - YPDSF_2597 - transposase for the IS1541 insertion element 2540 45.92 0 2947777..2948976 + 399 145599863 - YPDSF_2598 - prophage integrase 2541 33.15 -2 2949055..2950143 + 362 145599864 - YPDSF_2599 - hypothetical protein 2542 33.16 -2 2950194..2951339 + 381 145599865 - YPDSF_2600 - hypothetical protein 2543 32.13 -2 2951615..2951863 + 82 145599866 - YPDSF_2601 - hypothetical protein 2544 53.40 +1 2952715..2953038 + 107 145599867 - YPDSF_2602 - hypothetical protein 2545 52.25 0 2953060..2953947 + 295 145599868 - YPDSF_2603 - putative DNA-binding prophage protein 2546 40.30 -1 2953940..2954140 + 66 145599869 - YPDSF_2604 - transcriptional regulator 2547 50.64 0 2954140..2954682 + 180 145599870 - YPDSF_2605 - prophage protein 2548 51.46 0 2954675..2955634 + 319 145599871 - YPDSF_2606 - prophage DNA primase 2549 54.09 +1 2955631..2956719 + 362 145599872 - YPDSF_2607 - regulatory prophage protein 2550 46.67 0 2957068..2957382 - 104 145599873 - YPDSF_2608 - DNA-binding prophage protein 2551 46.23 0 2957388..2957705 - 105 145599874 - YPDSF_2609 - prophage protein 2552 49.72 0 2958120..2958296 + 58 145599875 - YPDSF_2610 - hypothetical protein 2553 52.79 0 2958310..2959332 + 340 145599876 - YPDSF_2611 - transposase 2554 50.38 0 2959332..2960111 + 259 145599877 - YPDSF_2612 - transposase/IS protein 2555 45.08 0 2960658..2960921 + 87 145599878 - YPDSF_2614 - IS1400 transposase A 2556 48.57 0 2962314..2963081 + 255 145599879 - YPDSF_2616 - hypothetical protein 2557 49.65 0 2963413..2963700 + 95 145599880 - YPDSF_2617 - LexA regulated protein 2558 47.39 0 2963796..2964044 + 82 145599881 - YPDSF_2618 - hypothetical protein 2559 47.16 0 2964117..2964644 + 175 145599882 - YPDSF_2619 - flavodoxin FldA 2560 42.73 -1 2965011..2965457 + 148 145599883 fur YPDSF_2620 - ferric uptake regulator 2561 51.17 0 2965898..2968000 - 700 145599884 - YPDSF_2621 - Beta-N-acetylhexosaminidase 2562 46.31 0 2967939..2968562 - 207 145599885 - YPDSF_2622 - hypothetical protein 2563 48.80 0 2968890..2970311 - 473 145599886 - YPDSF_2623 - hypothetical protein 2564 49.58 0 2971017..2972684 - 555 145599887 - YPDSF_2624 - glutaminyl-tRNA synthetase 2565 49.41 0 2972899..2974932 - 677 145599888 - YPDSF_2625 - pts system, N-acetylglucosamine-specific IIABC component 2566 47.07 0 2975332..2976132 + 266 145599889 nagB YPDSF_2626 - glucosamine-6-phosphate deaminase 2567 48.34 0 2976152..2977297 + 381 145599890 nagA YPDSF_2627 - N-acetylglucosamine-6-phosphate deacetylase 2568 49.68 0 2977275..2978540 + 421 145599891 - YPDSF_2628 - N-acetylglucosamine regulatory protein 2569 49.27 0 2978613..2979365 + 250 145599892 - YPDSF_2629 - UMP phosphatase 2570 49.19 0 2979720..2981384 + 554 145599893 asnB YPDSF_2630 - asparagine synthetase B 2571 53.55 +1 2982855..2984036 - 393 145599894 ubiF YPDSF_2631 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 2572 48.19 0 2984263..2985702 + 479 145599895 - YPDSF_2632 - tRNA-thiotransferase 2573 50.00 0 2986029..2987102 + 357 145599896 - YPDSF_2633 - hypothetical protein 2574 47.05 0 2987099..2987572 + 157 145599897 - YPDSF_2634 - putative metalloprotease 2575 43.14 -1 2987552..2987704 - 50 145599898 - YPDSF_2635 - hypothetical protein 2576 46.08 0 2987690..2988568 + 292 145599899 - YPDSF_2636 - membrane protein 2577 50.85 0 2988537..2990123 + 528 145599900 lnt YPDSF_2637 - apolipoprotein N-acyltransferase 2578 45.32 0 2990888..2991805 + 305 145599901 - YPDSF_2638 - glutamate and aspartate transporter subunit 2579 47.37 0 2991979..2992719 + 246 145599902 - YPDSF_2639 - glutamate/aspartate transport system permease 2580 48.30 0 2992719..2993393 + 224 145599903 - YPDSF_2640 - glutamate/aspartate transport system permease 2581 45.18 0 2993393..2994118 + 241 145599904 - YPDSF_2641 - glutamate/aspartate transport ATP-binding protein 2582 49.07 0 2994252..2994734 - 160 145599905 - YPDSF_2642 - hypothetical protein 2583 51.06 0 2994995..2997577 + 860 145599906 leuS YPDSF_2643 - leucyl-tRNA synthetase 2584 52.08 0 2997592..2998215 + 207 145599907 - YPDSF_2644 - LPS-assembly lipoprotein RplB 2585 50.05 0 2998212..2999246 + 344 145599908 holA YPDSF_2645 - DNA polymerase III subunit delta 2586 49.02 0 2999236..2999898 + 220 145599909 nadD YPDSF_2646 - nicotinic acid mononucleotide adenylyltransferase 2587 48.74 0 3000122..3000439 + 105 145599910 - YPDSF_2647 - hypothetical protein 2588 52.65 0 3000443..3000913 + 156 145599911 - YPDSF_2648 - SPOUT methyltransferase superfamily protein 2589 49.26 0 3000995..3002890 + 631 145599912 - YPDSF_2649 - penicillin-binding protein 2 2590 47.80 0 3003090..3004202 + 370 145599913 - YPDSF_2650 - cell wall shape-determining protein 2591 53.09 +1 3004212..3005294 + 360 145599914 - YPDSF_2651 - rare lipoprotein A 2592 48.71 0 3005697..3006899 + 400 145599915 - YPDSF_2652 - D-alanyl-D-alanine carboxypeptidase fraction A 2593 47.35 0 3007097..3007360 + 87 145599916 - YPDSF_2653 - hypothetical protein 2594 49.00 0 3007572..3008273 + 233 145599917 lipB YPDSF_2654 - lipoyltransferase 2595 50.10 0 3008466..3009431 + 321 145599918 - YPDSF_2655 - lipoyl synthase 2596 46.51 0 3009612..3009869 - 85 145599919 tatE YPDSF_2656 - twin argininte translocase protein A 2597 34.64 -2 3009924..3010076 - 50 145599920 - YPDSF_2657 - hypothetical protein 2598 46.88 0 3010436..3010819 + 127 145599921 - YPDSF_2658 - membrane protein 2599 42.86 -1 3011242..3011451 - 69 145599922 cspE YPDSF_2659 - cold shock protein CspE 2600 36.18 -2 3011718..3012209 + 163 145599923 - YPDSF_2660 - hypothetical protein 2601 35.76 -2 3012539..3013156 - 205 145599924 - YPDSF_2661 - LuxR family regulatory protein 2602 38.01 -2 3013690..3014544 + 284 145599925 - YPDSF_2662 - hypothetical protein 2603 42.71 -1 3014621..3014908 + 95 145599926 - YPDSF_2663 - hypothetical protein 2604 36.92 -2 3014926..3015120 - 64 145599927 - YPDSF_2664 - hypothetical protein 2605 39.24 -1 3015563..3015850 + 95 145599928 - YPDSF_2665 - hypothetical protein 2606 46.73 0 3015866..3017656 - 596 145599929 - YPDSF_2666 - ABC transport protein 2607 53.06 +1 3018226..3019041 - 271 145599930 - YPDSF_2667 - hypothetical protein 2608 53.16 +1 3019051..3020109 - 352 145599931 - YPDSF_2668 - hypothetical protein 2609 55.76 +1 3020124..3022094 - 656 145599932 - YPDSF_2669 - carbohydrate kinase 2610 56.35 +1 3022126..3023259 - 377 145599933 - YPDSF_2670 - hypothetical protein 2611 54.03 +1 3023283..3024311 - 342 145599934 - YPDSF_2671 - sugar transport system permease protein 2612 54.13 +1 3024323..3025870 - 515 145599935 - YPDSF_2672 - sugar transport ATP-binding protein 2613 53.23 +1 3025919..3026848 - 309 145599936 - YPDSF_2673 - sugar-binding periplasmic protein 2614 55.69 +1 3026974..3027483 - 169 145599937 - YPDSF_2674 - myo-inositol 2-dehydrogenase 2615 55.75 +1 3027455..3027958 - 167 145599938 - YPDSF_2675 - hypothetical protein 2616 55.99 +1 3028252..3028785 - 177 145599939 - YPDSF_2676 - thiamine pyrophosphate-dependent protein 2617 57.46 +1 3028827..3031727 - 966 145599940 - YPDSF_2677 - aldehyde dehydrogenase 2618 55.91 +1 3032086..3032940 + 284 145599941 - YPDSF_2678 - hypothetical protein 2619 50.01 0 3034648..3040626 + 1992 145599942 - YPDSF_2679 - hypothetical protein 2620 52.54 0 3040683..3043046 + 787 145599943 - YPDSF_2680 - hypothetical protein 2621 49.59 0 3043259..3043504 - 81 145599944 - YPDSF_2681 - DNA-binding protein 2622 32.82 -2 3044177..3044758 + 193 145599945 - YPDSF_2682 - hypothetical protein 2623 36.76 -2 3044830..3045033 + 67 145599946 - YPDSF_2683 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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