version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2397 41.90 -1 2788978..2790471 - 497 145599720 - YPDSF_2449 - bacteriophage coat protein 2398 49.67 0 2790592..2790891 - 99 145599721 - YPDSF_2450 - hypothetical protein 2399 51.60 0 2790845..2791249 + 134 145599722 - YPDSF_2451 - hypothetical protein 2400 52.57 0 2790893..2791261 - 122 145599723 - YPDSF_2452 - hypothetical protein 2401 52.49 0 2791283..2792791 - 502 145599724 - YPDSF_2453 - bacteriophage tail sheath protein 2402 51.79 0 2792788..2792982 - 64 145599725 - YPDSF_2454 - bacteriophage protein 2403 51.94 0 2792987..2793604 - 205 145599726 - YPDSF_2455 - ATP-binding protein 2404 39.86 -1 2793650..2793940 - 96 145599727 - YPDSF_2456 - bacteriophage protein 2405 44.40 0 2794537..2795331 - 264 145599728 - YPDSF_2457 - hypothetical protein 2406 48.34 0 2795307..2796119 - 270 145599729 - YPDSF_2458 - transcriptional regulatory protein 2407 52.19 0 2796122..2796853 - 243 145599730 - YPDSF_2459 - putative aldolase 2408 51.26 0 2796850..2798154 - 434 145599731 - YPDSF_2460 - hypothetical protein 2409 47.08 0 2798365..2798844 - 159 145599732 - YPDSF_2461 - phage antitermination protein Q 2410 47.72 0 2799118..2799840 + 240 145599733 - YPDSF_2462 - prophage repressor protein 2411 35.96 -2 2799890..2800003 - 37 145599734 - YPDSF_2463 - hypothetical protein 2412 44.03 0 2800046..2800288 + 80 145599735 - YPDSF_2464 - stress response protein 2413 40.38 -1 2800460..2801395 + 311 145599736 - YPDSF_2465 - outer membrane protease 2414 50.45 0 2801877..2803664 + 595 145599737 - YPDSF_2466 - methyl-accepting chemotaxis protein 2415 49.39 0 2803738..2804727 - 329 145599738 - YPDSF_2467 - hypothetical protein 2416 47.15 0 2805143..2806669 + 508 145599739 - YPDSF_2468 - putative transport protein 2417 49.79 0 2806944..2808110 + 388 145599740 - YPDSF_2469 - beta-lactamase/D-alanine carboxypeptidase 2418 44.35 0 2808850..2809965 - 371 145599741 - YPDSF_2470 - outer membrane porin protein C 2419 43.01 -1 2812245..2814197 + 650 145599742 - YPDSF_2473 - hypothetical protein 2420 39.09 -1 2814365..2814937 + 190 145599743 - YPDSF_2474 - two-component sensor protein like yojN 2421 39.60 -1 2814940..2815593 + 217 145599744 - YPDSF_2475 - transcriptional regulator RcsB 2422 43.87 0 2815661..2818441 - 926 145599745 - YPDSF_2476 - hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2423 49.70 0 2818722..2821397 - 891 145599746 - YPDSF_2477 - DNA gyrase subunit A 2424 49.93 0 2821659..2822387 + 242 145599747 - YPDSF_2478 - 3-demethylubiquinone-9 3-methyltransferase 2425 48.58 0 2822881..2825169 + 762 145599748 - YPDSF_2479 - ribonucleotide-diphosphate reductase subunit alpha 2426 45.80 0 2825332..2826462 + 376 145599749 nrdB YPDSF_2480 - ribonucleotide-diphosphate reductase subunit beta 2427 49.22 0 2826466..2826723 + 85 145599750 - YPDSF_2481 - 2Fe-2S ferredoxin YfaE 2428 47.06 0 2826758..2827267 + 169 145599751 - YPDSF_2482 - ecotin precursor 2429 53.94 +1 2827325..2828518 - 397 145599752 - YPDSF_2483 - competence damage-inducible protein A 2430 49.55 0 2829137..2830345 + 402 145599753 - YPDSF_2484 - tyrosine-specific transport protein 2431 53.04 +1 2830602..2831144 - 180 145599754 - YPDSF_2485 - hypothetical protein 2432 49.44 0 2831505..2832944 + 479 145599755 - YPDSF_2486 - catalase 2433 49.24 0 2833012..2835192 - 726 145599756 dinG YPDSF_2487 - ATP-dependent DNA helicase DinG 2434 41.67 -1 2835462..2836577 + 371 145599757 - YPDSF_2488 - outer membrane protein C2 2435 44.81 0 2836614..2836796 - 60 145599758 - YPDSF_2489 - hypothetical protein 2436 49.94 0 2836989..2837879 + 296 145599759 - YPDSF_2490 - hypothetical protein 2437 50.23 0 2837989..2838207 + 72 145599760 - YPDSF_2491 - hypothetical protein 2438 49.07 0 2838325..2839347 - 340 145599761 - YPDSF_2492 - amino acid decarboxylase 2439 49.55 0 2839432..2840640 - 402 145599762 - YPDSF_2493 - transposase for the IS285 insertion element 2440 44.81 0 2840674..2841954 - 426 145599763 - YPDSF_2494 - amino acid decarboxylase 2441 47.12 0 2842024..2843358 - 444 145599764 - YPDSF_2495 - arginine:agmatin antiporter 2442 25.44 -2 2843633..2843860 + 75 145599765 - YPDSF_2496 - hypothetical protein 2443 50.30 0 2843914..2844750 - 278 145599766 - YPDSF_2497 - ABC transport integral membrane subunit 2444 48.03 0 2844747..2845685 - 312 145599767 - YPDSF_2498 - ABC transport ATP-binding subunit 2445 48.48 0 2845682..2846836 - 384 145599768 - YPDSF_2499 - ABC transport integral membrane subunit 2446 48.34 0 2847097..2848029 - 310 145599769 - YPDSF_2500 - hypothetical protein 2447 51.11 0 2848765..2849619 + 284 145599770 - YPDSF_2501 - sulfurtransferase 2448 47.95 0 2849837..2851252 - 471 145599771 - YPDSF_2502 - pyridoxal-dependent decarboxylase 2449 46.97 0 2851276..2852133 - 285 145599772 - YPDSF_2503 - hypothetical protein 2450 50.21 0 2852248..2852946 - 232 145599773 - YPDSF_2504 - ABC transport ATP-binding subunit 2451 48.51 0 2853040..2853876 - 278 145599774 - YPDSF_2505 - ABC transport ATP-binding subunit 2452 50.23 0 2853873..2854949 - 358 145599775 - YPDSF_2506 - branched chain amino acid ABC transporter permease 2453 50.00 0 2854949..2856550 - 533 145599776 - YPDSF_2507 - branched chain amino acid ABC transporter permease 2454 49.96 0 2856674..2857942 - 422 145599777 - YPDSF_2508 - substrate-binding periplasmic transport protein 2455 42.41 -1 2858370..2858843 - 157 145599778 - YPDSF_2509 - hypothetical protein 2456 41.84 -1 2859089..2859970 - 293 145599779 - YPDSF_2510 - ABC transport membrane permease 2457 44.02 0 2859973..2860833 - 286 145599780 - YPDSF_2511 - ABC transport membrane permease 2458 41.29 -1 2860936..2861865 - 309 145599781 - YPDSF_2512 - substrate-binding periplasmic transport protein 2459 41.24 -1 2861902..2862774 - 290 145599782 - YPDSF_2513 - ABC transport ATP-binding subunit 2460 43.37 0 2862946..2863194 - 82 145599783 - YPDSF_2514 - hypothetical protein 2461 47.55 0 2863379..2864482 - 367 145599784 - YPDSF_2515 - hypothetical protein 2462 40.35 -1 2864624..2864794 - 56 145599785 - YPDSF_2516 - hypothetical protein 2463 42.40 -1 2864795..2865136 + 113 145599786 - YPDSF_2517 - hypothetical protein 2464 43.33 0 2865162..2865701 - 179 145599787 - YPDSF_2518 - adenylate cyclase 2 2465 45.59 0 2865911..2867623 + 570 145599788 - YPDSF_2519 - D-lactate dehydrogenase 2466 45.37 0 2867744..2868715 - 323 145599789 pbpG YPDSF_2520 - D-alanyl-D-alanine endopeptidase 2467 37.22 -2 2869018..2869197 + 59 145599790 - YPDSF_2521 - hypothetical protein 2468 48.68 0 2869271..2870215 - 314 145599791 - YPDSF_2522 - tRNA-dihydrouridine synthase C 2469 34.30 -2 2870509..2871438 - 309 145599792 - YPDSF_2523 - hypothetical protein 2470 45.75 0 2871853..2872311 - 152 145599793 - YPDSF_2524 - transposase for the IS1541 insertion element 2471 43.70 0 2872301..2873101 - 266 145599794 - YPDSF_2525 - hypothetical protein 2472 45.02 0 2873240..2874103 - 287 145599795 - YPDSF_2526 - purine nucleoside phosphorylase 2473 45.46 0 2874416..2875297 + 293 145599796 - YPDSF_2527 - membrane protein 2474 43.29 0 2875335..2876228 - 297 145599797 - YPDSF_2528 - DNA-binding transcriptional activator XapR 2475 49.44 0 2876460..2878508 - 682 145599798 - YPDSF_2529 - choline transport protein BetT 2476 50.08 0 2878873..2879469 + 198 145599799 - YPDSF_2530 - transcriptional regulator BetI 2477 54.04 +1 2879527..2880999 + 490 145599800 - YPDSF_2531 - betaine aldehyde dehydrogenase 2478 53.17 +1 2881022..2882725 + 567 145599801 - YPDSF_2532 - choline dehydrogenase 2479 45.75 0 2882954..2883412 - 152 145599802 - YPDSF_2533 - transposase for the IS1541 insertion element 2480 47.40 0 2883647..2884357 - 236 145599803 - YPDSF_2534 - membrane protein 2481 54.30 +1 2884500..2884952 - 150 145599804 MoaE YPDSF_2535 - molybdopterin synthase large subunit 2482 52.85 0 2884955..2885200 - 81 145599805 moaD YPDSF_2536 - molybdopterin synthase small subunit 2483 53.33 +1 2885197..2885676 - 159 145599806 moaC YPDSF_2537 - molybdenum cofactor biosynthesis protein C 2484 49.12 0 2885777..2886802 - 341 145599807 moaA YPDSF_2538 - molybdenum cofactor biosynthesis protein A 2485 50.32 0 2887289..2888212 + 307 145599808 - YPDSF_2539 - hypothetical protein 2486 45.53 0 2888343..2888588 - 81 145599809 - YPDSF_2540 - hypothetical protein 2487 49.95 0 2888880..2890895 - 671 145599810 - YPDSF_2541 - excinuclease ABC subunit B 2488 50.21 0 2891986..2892696 + 236 145599811 - YPDSF_2542 - amino acid transporter 2489 54.22 +1 2892848..2893570 - 240 145599812 bioD YPDSF_2543 - dithiobiotin synthetase 2490 53.86 +1 2893563..2894366 - 267 145599813 - YPDSF_2544 - biotin synthesis protein BioC 2491 58.07 +2 2894350..2895501 - 383 145599814 - YPDSF_2545 - 8-amino-7-oxononanoate synthase 2492 51.06 0 2895501..2896538 - 345 145599815 - YPDSF_2546 - biotin synthase 2493 53.40 +1 2896637..2897917 + 426 145599816 - YPDSF_2547 - adenosylmethionine--8-amino-7-oxononanoate transaminase 2494 51.84 0 2898102..2899106 - 334 145599817 - YPDSF_2548 - 6-phosphogluconolactonase 2495 52.07 0 2899397..2900218 + 273 145599818 - YPDSF_2549 - phosphotransferase 2496 54.26 +1 2900274..2901353 - 359 145599819 modC YPDSF_2550 - molybdate transporter ATP-binding protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0