version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2339 50.96 0 2723807..2724895 + 362 145599662 - YPDSF_2390 - hypothetical protein 2340 49.42 0 2725059..2725916 + 285 145599663 - YPDSF_2391 - endonuclease IV 2341 49.72 0 2725987..2728458 - 823 145599664 - YPDSF_2392 - outer membrane usher protein PsaC precursor 2342 37.71 -2 2728542..2729363 - 273 145599665 - YPDSF_2393 - chaperone protein PsaB precursor 2343 42.14 -1 2729490..2729966 - 158 145599666 - YPDSF_2394 - pH 6 antigen precursor (antigen 4) (adhesin) 2344 34.53 -2 2730511..2731011 - 166 145599667 - YPDSF_2395 - hypothetical protein 2345 37.67 -2 2730996..2731640 - 214 145599668 - YPDSF_2396 - regulatory protein 2346 54.09 +1 2731965..2733665 - 566 145599669 - YPDSF_2397 - fructose-specific PTS system IIBC component 2347 53.14 +1 2733680..2734618 - 312 145599670 fruK YPDSF_2398 - 1-phosphofructokinase 2348 52.12 0 2734615..2735748 - 377 145599671 - YPDSF_2399 - bifunctional fructose-specific PTS IIA/HPr protein 2349 49.56 0 2736010..2736465 + 151 145599672 - YPDSF_2400 - Mut family protein 2350 55.16 +1 2736578..2737576 - 332 145599673 - YPDSF_2401 - ABC transport integral membrane subunit 2351 55.75 +1 2737612..2739186 - 524 145599674 - YPDSF_2402 - ABC transport ATP-binding subunit 2352 54.73 +1 2739295..2740383 - 362 145599675 - YPDSF_2403 - periplasmic carbohydrate-binding transport protein 2353 54.57 +1 2740499..2741209 - 236 145599676 - YPDSF_2404 - ribose 5-phosphate isomerase 2354 58.56 +2 2741229..2742782 - 517 145599677 - YPDSF_2405 - carbohydrate kinase 2355 56.98 +1 2742786..2744282 - 498 145599678 - YPDSF_2406 - aldehyde dehydrogenase 2356 56.08 +1 2744633..2745775 + 380 145599679 - YPDSF_2407 - hypothetical protein 2357 60.46 +2 2745787..2746737 + 316 145599680 - YPDSF_2408 - D-isomer specific 2-hydroxyacid dehydrogenase family protein 2358 58.70 +2 2746748..2747563 + 271 145599681 - YPDSF_2409 - short chain oxidoreductase 2359 54.12 +1 2747632..2747886 - 84 145599682 - YPDSF_2410 - hypothetical protein 2360 51.49 0 2748261..2749505 + 414 145599683 - YPDSF_2411 - tryptophan-specific transport protein 2361 46.07 0 2749609..2750181 + 190 145599684 - YPDSF_2412 - elongation factor P 2362 49.83 0 2750321..2751514 - 397 145599685 - YPDSF_2413 - mannonate dehydratase 2363 51.32 0 2752118..2753590 + 490 145599686 - YPDSF_2414 - D-mannonate oxidoreductase 2364 49.93 0 2753734..2754414 - 226 145599687 - YPDSF_2415 - transcriptional regulatory protein 2365 48.15 0 2754386..2754520 - 44 145599688 - YPDSF_2416 - transcriptional regulatory protein 2366 48.37 0 2755271..2756254 + 327 145599689 - YPDSF_2417 - cobalamin synthesis protein 2367 45.87 0 2756313..2757014 + 233 145599690 - YPDSF_2418 - hypothetical protein 2368 46.32 0 2757456..2758040 + 194 145599691 - YPDSF_2419 - putative outer membrane lipoprotein 2369 42.77 -1 2758736..2760208 + 490 145599692 - YPDSF_2420 - hypothetical protein 2370 47.54 0 2760290..2762098 + 602 145599693 - YPDSF_2421 - substrate-binding transport protein 2371 48.05 0 2762108..2763208 + 366 145599694 - YPDSF_2422 - ABC transporter integral membrane subunit 2372 50.05 0 2763208..2764236 + 342 145599695 - YPDSF_2423 - ABC transporter integral membrane subunit 2373 51.54 0 2764238..2765830 + 530 145599696 - YPDSF_2424 - ABC transporter ATP-binding subunit 2374 50.14 0 2765891..2766235 - 114 145599697 - YPDSF_2425 - hypothetical protein 2375 30.19 -2 2766649..2766807 - 52 145599698 - YPDSF_2426 - hypothetical protein 2376 50.08 0 2767220..2768419 - 399 145599699 - YPDSF_2427 - bicyclomycin/multidrug efflux system 2377 51.98 0 2768523..2769230 - 235 145599700 - YPDSF_2428 - 16S rRNA pseudouridylate synthase A 2378 52.56 0 2769764..2771521 + 585 145599701 - YPDSF_2429 - DEAD box helicase family protein 2379 46.32 0 2771683..2771967 + 94 145599702 - YPDSF_2430 - 50S ribosomal protein L25 2380 45.97 0 2772106..2772564 - 152 145599703 - YPDSF_2431 - transposase for the IS1541 insertion element 2381 48.46 0 2772765..2773769 - 334 145599704 - YPDSF_2432 - nucleoid-associated protein NdpA 2382 46.93 0 2773947..2774174 + 75 145599705 - YPDSF_2433 - hypothetical protein 2383 49.30 0 2774202..2775998 + 598 145599706 - YPDSF_2434 - membrane protein 2384 48.48 0 2776969..2778117 + 382 145599707 - YPDSF_2436 - hypothetical protein 2385 39.06 -1 2778130..2778618 + 162 145599708 - YPDSF_2437 - hypothetical protein 2386 51.61 0 2778889..2778981 + 30 145599709 - YPDSF_2438 - hypothetical protein 2387 46.21 0 2779806..2781242 - 478 145599710 - YPDSF_2439 - 6-phospho-beta-glucosidase 2388 37.65 -2 2781533..2782273 - 246 145599711 - YPDSF_2440 - LacI-family regulatory protein 2389 46.92 0 2782571..2783350 - 259 145599712 - YPDSF_2441 - bacteriophage tail fiber protein 2390 52.84 0 2783447..2783851 - 134 145599713 - YPDSF_2442 - bacteriophage protein 2391 57.09 +1 2783791..2784051 - 86 145599714 - YPDSF_2443 - bacteriophage protein 2392 54.35 +1 2784048..2785184 - 378 145599715 - YPDSF_2444 - bacteriophage protein 2393 53.29 +1 2785188..2785643 - 151 145599716 - YPDSF_2445 - bacteriophage protein GP46 2394 51.36 0 2785640..2786044 - 134 145599717 - YPDSF_2446 - bacteriophage (baseplate assembly) protein 2395 52.27 0 2786253..2787308 - 351 145599718 - YPDSF_2447 - bacteriophage tail protein 2396 55.29 +1 2787305..2788711 - 468 145599719 - YPDSF_2448 - bacteriophage protein 2397 41.90 -1 2788978..2790471 - 497 145599720 - YPDSF_2449 - bacteriophage coat protein 2398 49.67 0 2790592..2790891 - 99 145599721 - YPDSF_2450 - hypothetical protein 2399 51.60 0 2790845..2791249 + 134 145599722 - YPDSF_2451 - hypothetical protein 2400 52.57 0 2790893..2791261 - 122 145599723 - YPDSF_2452 - hypothetical protein 2401 52.49 0 2791283..2792791 - 502 145599724 - YPDSF_2453 - bacteriophage tail sheath protein 2402 51.79 0 2792788..2792982 - 64 145599725 - YPDSF_2454 - bacteriophage protein 2403 51.94 0 2792987..2793604 - 205 145599726 - YPDSF_2455 - ATP-binding protein 2404 39.86 -1 2793650..2793940 - 96 145599727 - YPDSF_2456 - bacteriophage protein 2405 44.40 0 2794537..2795331 - 264 145599728 - YPDSF_2457 - hypothetical protein 2406 48.34 0 2795307..2796119 - 270 145599729 - YPDSF_2458 - transcriptional regulatory protein 2407 52.19 0 2796122..2796853 - 243 145599730 - YPDSF_2459 - putative aldolase 2408 51.26 0 2796850..2798154 - 434 145599731 - YPDSF_2460 - hypothetical protein 2409 47.08 0 2798365..2798844 - 159 145599732 - YPDSF_2461 - phage antitermination protein Q 2410 47.72 0 2799118..2799840 + 240 145599733 - YPDSF_2462 - prophage repressor protein 2411 35.96 -2 2799890..2800003 - 37 145599734 - YPDSF_2463 - hypothetical protein 2412 44.03 0 2800046..2800288 + 80 145599735 - YPDSF_2464 - stress response protein 2413 40.38 -1 2800460..2801395 + 311 145599736 - YPDSF_2465 - outer membrane protease 2414 50.45 0 2801877..2803664 + 595 145599737 - YPDSF_2466 - methyl-accepting chemotaxis protein 2415 49.39 0 2803738..2804727 - 329 145599738 - YPDSF_2467 - hypothetical protein 2416 47.15 0 2805143..2806669 + 508 145599739 - YPDSF_2468 - putative transport protein 2417 49.79 0 2806944..2808110 + 388 145599740 - YPDSF_2469 - beta-lactamase/D-alanine carboxypeptidase 2418 44.35 0 2808850..2809965 - 371 145599741 - YPDSF_2470 - outer membrane porin protein C 2419 43.01 -1 2812245..2814197 + 650 145599742 - YPDSF_2473 - hypothetical protein 2420 39.09 -1 2814365..2814937 + 190 145599743 - YPDSF_2474 - two-component sensor protein like yojN 2421 39.60 -1 2814940..2815593 + 217 145599744 - YPDSF_2475 - transcriptional regulator RcsB 2422 43.87 0 2815661..2818441 - 926 145599745 - YPDSF_2476 - hybrid sensory kinase in two-component regulatory system with RcsB and YojN 2423 49.70 0 2818722..2821397 - 891 145599746 - YPDSF_2477 - DNA gyrase subunit A 2424 49.93 0 2821659..2822387 + 242 145599747 - YPDSF_2478 - 3-demethylubiquinone-9 3-methyltransferase 2425 48.58 0 2822881..2825169 + 762 145599748 - YPDSF_2479 - ribonucleotide-diphosphate reductase subunit alpha 2426 45.80 0 2825332..2826462 + 376 145599749 nrdB YPDSF_2480 - ribonucleotide-diphosphate reductase subunit beta 2427 49.22 0 2826466..2826723 + 85 145599750 - YPDSF_2481 - 2Fe-2S ferredoxin YfaE 2428 47.06 0 2826758..2827267 + 169 145599751 - YPDSF_2482 - ecotin precursor 2429 53.94 +1 2827325..2828518 - 397 145599752 - YPDSF_2483 - competence damage-inducible protein A 2430 49.55 0 2829137..2830345 + 402 145599753 - YPDSF_2484 - tyrosine-specific transport protein 2431 53.04 +1 2830602..2831144 - 180 145599754 - YPDSF_2485 - hypothetical protein 2432 49.44 0 2831505..2832944 + 479 145599755 - YPDSF_2486 - catalase 2433 49.24 0 2833012..2835192 - 726 145599756 dinG YPDSF_2487 - ATP-dependent DNA helicase DinG 2434 41.67 -1 2835462..2836577 + 371 145599757 - YPDSF_2488 - outer membrane protein C2 2435 44.81 0 2836614..2836796 - 60 145599758 - YPDSF_2489 - hypothetical protein 2436 49.94 0 2836989..2837879 + 296 145599759 - YPDSF_2490 - hypothetical protein 2437 50.23 0 2837989..2838207 + 72 145599760 - YPDSF_2491 - hypothetical protein 2438 49.07 0 2838325..2839347 - 340 145599761 - YPDSF_2492 - amino acid decarboxylase 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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