version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2175 49.20 0 2517334..2518083 - 249 145599498 - YPDSF_2226 - fimbrial biogenesis protein 2176 48.62 0 2518237..2519433 - 398 145599499 - YPDSF_2227 - hypothetical protein 2177 47.55 0 2519695..2520123 - 142 145599500 ndk YPDSF_2228 - nucleoside diphosphate kinase 2178 38.99 -1 2520450..2522870 - 806 145599501 - YPDSF_2229 - hypothetical protein 2179 49.34 0 2523586..2528064 + 1492 145599502 - YPDSF_2230 - autotransporter protein 2180 49.10 0 2528622..2531780 + 1052 145599503 - YPDSF_2231 - hypothetical protein 2181 51.71 0 2531746..2532066 + 106 145599504 - YPDSF_2232 - hypothetical protein 2182 50.84 0 2532404..2533357 - 317 145599505 - YPDSF_2233 - enhanced serine sensitivity protein SseB 2183 53.50 +1 2533436..2534734 - 432 145599506 - YPDSF_2234 - aminopeptidase B 2184 47.26 0 2534874..2535074 - 66 145599507 - YPDSF_2235 - hypothetical protein 2185 51.49 0 2535104..2535439 - 111 145599508 - YPDSF_2236 - ferredoxin 2186 55.03 +1 2535442..2537340 - 632 145599509 hscA YPDSF_2237 - chaperone protein HscA 2187 50.67 0 2537583..2538107 - 174 145599510 hscB YPDSF_2238 - co-chaperone HscB 2188 46.30 0 2538218..2538541 - 107 145599511 iscA YPDSF_2239 - iron-sulfur cluster assembly protein 2189 46.51 0 2538811..2539197 - 128 145599512 - YPDSF_2240 - scaffold protein 2190 48.86 0 2539228..2540457 - 409 145599513 - YPDSF_2241 - aminotransferase 2191 52.32 0 2540511..2541005 - 164 145599514 - YPDSF_2242 - DNA-binding transcriptional regulator IscR 2192 50.26 0 2541161..2541934 - 257 145599515 - YPDSF_2243 - SpoU rRNA methylase family 2193 49.50 0 2542053..2542856 + 267 145599516 - YPDSF_2244 - inositol monophosphatase 2194 50.93 0 2542955..2543977 - 340 145599517 - YPDSF_2245 - hypothetical protein 2195 44.00 0 2543968..2544642 - 224 145599518 - YPDSF_2246 - hypothetical protein 2196 46.92 0 2544784..2546145 + 453 145599519 - YPDSF_2247 - stationary phase inducible protein CsiE 2197 50.26 0 2546142..2547299 - 385 145599520 - YPDSF_2248 - putative 3-phenylpropionic acid transporter 2198 40.58 -1 2547669..2548220 - 183 145599521 - YPDSF_2249 - attachment invasion locus protein 2199 50.00 0 2548330..2548551 - 73 145599522 - YPDSF_2250 - membrane protein 2200 48.72 0 2548664..2549917 - 417 145599523 glyA YPDSF_2251 - serine hydroxymethyltransferase 2201 46.85 0 2550458..2551648 + 396 145599524 - YPDSF_2252 - nitric oxide dioxygenase 2202 52.79 0 2551935..2552957 + 340 145599525 - YPDSF_2253 - transposase for insertion sequence IS100 2203 50.38 0 2552957..2553736 + 259 145599526 - YPDSF_2254 - transposase/IS protein 2204 45.56 0 2554072..2554971 + 299 145599527 - YPDSF_2255 - hypothetical protein 2205 45.13 0 2555140..2555478 - 112 145599528 - YPDSF_2256 - nitrogen regulatory protein P-II 1 2206 49.72 0 2555493..2557115 - 540 145599529 nadE YPDSF_2257 - NAD synthetase 2207 50.00 0 2557275..2558612 - 445 145599530 - YPDSF_2258 - two-component system response regulator 2208 50.78 0 2558575..2559657 - 360 145599531 - YPDSF_2259 - hypothetical protein 2209 48.57 0 2559661..2561097 - 478 145599532 - YPDSF_2260 - two-component system sensor kinase 2210 45.75 0 2561318..2561776 - 152 145599533 - YPDSF_2261 - transposase for the IS1541 insertion element 2211 40.46 -1 2563003..2563563 + 186 145599534 - YPDSF_2262 - hypothetical protein 2212 36.96 -2 2563886..2564464 + 192 145599535 - YPDSF_2263 - hypothetical protein 2213 53.39 +1 2564876..2568739 - 1287 145599536 - YPDSF_2264 - phosphoribosylformylglycinamidine synthase 2214 49.09 0 2569001..2570542 + 513 145599537 - YPDSF_2265 - putative transglycosylase 2215 53.72 +1 2570651..2571214 - 187 145599538 - YPDSF_2266 - tRNA-specific adenosine deaminase 2216 51.58 0 2571324..2572019 - 231 145599539 - YPDSF_2267 - hypothetical protein 2217 53.49 +1 2572246..2573133 - 295 145599540 murQ YPDSF_2268 - N-acetylmuramic acid-6-phosphate etherase 2218 49.29 0 2573341..2574180 + 279 145599541 - YPDSF_2269 - putative DNA-binding transcriptional regulator 2219 45.21 0 2574342..2574602 + 86 145599542 - YPDSF_2270 - (4Fe-4S) ferredoxin 2220 45.97 0 2574758..2575216 - 152 145599543 - YPDSF_2271 - transposase for the IS1541 insertion element 2221 51.19 0 2575414..2575581 - 55 145599544 - YPDSF_2272 - ribosome modulation factor 2222 49.57 0 2575851..2576429 - 192 145599545 - YPDSF_2273 - lipoprotein protein 2223 47.26 0 2576426..2578105 - 559 145599546 - YPDSF_2274 - paraquat-inducible protein B 2224 47.86 0 2578065..2579351 - 428 145599547 - YPDSF_2275 - paraquat-inducible protein A 2225 48.96 0 2579480..2581393 - 637 145599548 - YPDSF_2276 - ABC transporter ATPase component 2226 51.06 0 2581399..2583519 - 706 145599549 - YPDSF_2277 - 23S rRNA m(2)G2445 methyltransferase 2227 48.83 0 2583622..2584731 + 369 145599550 - YPDSF_2278 - iron-sulfur binding protein 2228 42.03 -1 2584757..2585308 - 183 145599551 - YPDSF_2279 - hypothetical protein 2229 43.32 0 2585491..2586501 - 336 145599552 - YPDSF_2280 - dihydroorotate dehydrogenase 2 2230 47.36 0 2587119..2589734 - 871 145599553 - YPDSF_2281 - aminopeptidase N 2231 47.34 0 2590435..2591655 + 406 145599554 - YPDSF_2282 - nicotinate phosphoribosyltransferase 2232 49.89 0 2592154..2593554 + 466 145599555 asnC YPDSF_2283 - asparaginyl-tRNA synthetase 2233 45.98 0 2593852..2594934 + 360 145599556 - YPDSF_2284 - outer membrane porin C protein 2234 49.50 0 2595176..2596381 + 401 145599557 - YPDSF_2285 - aromatic amino acid aminotransferase 2235 50.62 0 2596805..2597452 - 215 145599558 - YPDSF_2286 - metallo-beta-lactamase superfamily protein 2236 46.63 0 2597513..2598061 - 182 145599559 - YPDSF_2287 - hypothetical protein 2237 49.65 0 2598285..2600141 - 618 145599560 - YPDSF_2288 - hypothetical protein 2238 45.75 0 2600425..2600883 - 152 145599561 - YPDSF_2289 - transposase for the IS1541 insertion element 2239 51.82 0 2601099..2605556 - 1485 145599562 mukB YPDSF_2290 - cell division protein MukB 2240 47.05 0 2605553..2606281 - 242 145599563 - YPDSF_2291 - condesin subunit E 2241 49.66 0 2606262..2607584 - 440 145599564 - YPDSF_2292 - condesin subunit F 2242 47.84 0 2607581..2608366 - 261 145599565 - YPDSF_2293 - putative metallothionein SmtA 2243 49.95 0 2609157..2610089 - 310 145599566 - YPDSF_2294 - hypothetical protein 2244 51.26 0 2610413..2611165 - 250 145599567 - YPDSF_2295 - 3-deoxy-manno-octulosonate cytidylyltransferase 2245 46.99 0 2611162..2611344 - 60 145599568 - YPDSF_2296 - hypothetical protein 2246 45.71 0 2611892..2612101 - 69 145599569 - YPDSF_2297 - cold shock-like protein 2247 49.22 0 2612820..2614229 + 469 145599570 - YPDSF_2298 - hypothetical protein 2248 52.99 +1 2614237..2615223 - 328 145599571 lpxK YPDSF_2299 - tetraacyldisaccharide 4'-kinase 2249 46.60 0 2615220..2616968 - 582 145599572 - YPDSF_2300 - lipid transporter ATP-binding/permease protein 2250 47.21 0 2617004..2619295 - 763 145599573 - YPDSF_2301 - hypothetical protein 2251 46.67 0 2619842..2620126 - 94 145599574 ihfB YPDSF_2302 - integration host factor subunit beta 2252 47.97 0 2620187..2621860 - 557 145599575 rpsA YPDSF_2303 - 30S ribosomal protein S1 2253 50.79 0 2622034..2622726 - 230 145599576 cmk YPDSF_2304 - cytidylate kinase 2254 51.36 0 2623038..2624324 - 428 145599577 - YPDSF_2305 - 3-phosphoshikimate 1-carboxyvinyltransferase 2255 47.33 0 2624487..2625572 - 361 145599578 - YPDSF_2306 - phosphoserine aminotransferase 2256 38.85 -1 2625939..2627786 - 615 145599579 - YPDSF_2307 - hypothetical protein 2257 40.55 -1 2627807..2628901 - 364 145599580 - YPDSF_2308 - hypothetical protein 2258 46.72 0 2629170..2630207 - 345 145599581 ansB YPDSF_2309 - L-asparaginase II 2259 49.52 0 2630356..2632122 + 588 145599582 - YPDSF_2310 - hypothetical protein 2260 45.22 0 2632820..2633677 + 285 145599583 - YPDSF_2311 - formate transporter 2261 48.05 0 2633733..2636015 + 760 145599584 - YPDSF_2312 - formate acetyltransferase 1 2262 35.56 -2 2636133..2636807 - 224 145599585 - YPDSF_2313 - hypothetical protein 2263 46.67 0 2637794..2638528 + 244 145599586 pflA YPDSF_2314 - pyruvate formate lyase-activating enzyme 1 2264 49.61 0 2638682..2639830 - 382 145599587 - YPDSF_2315 - MFS family transporter 2265 49.11 0 2640061..2641353 - 430 145599588 - YPDSF_2316 - seryl-tRNA synthetase 2266 52.68 0 2641595..2642938 - 447 145599589 - YPDSF_2317 - recombination factor protein RarA 2267 45.16 0 2642949..2643557 - 202 145599590 lolA YPDSF_2318 - outer-membrane lipoprotein carrier protein 2268 50.87 0 2643750..2647649 - 1299 145599591 - YPDSF_2319 - cell division protein 2269 44.24 0 2647772..2648266 - 164 145599592 - YPDSF_2320 - leucine-responsive transcriptional regulator 2270 51.51 0 2649033..2649995 + 320 145599593 - YPDSF_2321 - thioredoxin reductase 2271 50.65 0 2650454..2652220 + 588 145599594 - YPDSF_2322 - cysteine/glutathione ABC transporter membrane/ATP-binding component 2272 51.65 0 2652223..2653947 + 574 145599595 - YPDSF_2323 - cysteine/glutathione ABC transporter membrane/ATP-binding component 2273 49.51 0 2654166..2654876 + 236 145599596 aat YPDSF_2324 - leucyl/phenylalanyl-tRNA--protein transferase 2274 49.77 0 2655042..2655260 + 72 145599597 infA YPDSF_2325 - translation initiation factor IF-1 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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