version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2037 50.31 0 2350770..2351741 - 323 145599360 glk YPDSF_2084 - glucokinase 2038 48.85 0 2351922..2352398 - 158 145599361 - YPDSF_2085 - hypothetical protein 2039 51.42 0 2352501..2353379 + 292 145599362 - YPDSF_2086 - LysR family transcriptional regulator 2040 48.89 0 2353515..2354504 + 329 145599363 - YPDSF_2087 - ion channel protein 2041 43.72 0 2354675..2355088 + 137 145599364 - YPDSF_2088 - hypothetical protein 2042 48.62 0 2355181..2356410 - 409 145599365 - YPDSF_2089 - manganese transport protein MntH 2043 43.73 0 2356861..2357928 + 355 145599366 - YPDSF_2090 - nucleoside permease 2044 52.87 +1 2357946..2358032 + 28 145599367 - YPDSF_2091 - CNT family H+/nucleoside symporter 2045 49.22 0 2359266..2360681 + 471 145599368 gltX YPDSF_2092 - glutamyl-tRNA synthetase 2046 45.97 0 2361169..2361627 + 152 145599369 - YPDSF_2093 - transposase for the IS1541 insertion element 2047 44.72 0 2361894..2362499 + 201 145599370 - YPDSF_2094 - hypothetical protein 2048 44.25 0 2362631..2362978 + 115 145599371 - YPDSF_2095 - hypothetical protein 2049 45.83 0 2363079..2363294 - 71 145599372 - YPDSF_2096 - hypothetical protein 2050 51.07 0 2363314..2365326 - 670 145599373 ligA YPDSF_2097 - NAD-dependent DNA ligase LigA 2051 49.24 0 2365417..2366403 - 328 145599374 - YPDSF_2098 - cell division protein ZipA 2052 47.89 0 2366652..2367386 + 244 145599375 - YPDSF_2099 - putative sulfate transport protein CysZ 2053 49.95 0 2367543..2368511 + 322 145599376 - YPDSF_2100 - cysteine synthase A 2054 45.74 0 2369010..2369267 + 85 145599377 - YPDSF_2101 - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2055 46.93 0 2369316..2371043 + 575 145599378 - YPDSF_2102 - phosphoenolpyruvate-protein phosphotransferase 2056 43.33 0 2371092..2371601 + 169 145599379 - YPDSF_2103 - glucose-specific PTS system component 2057 45.75 0 2371744..2372202 - 152 145599380 - YPDSF_2104 - transposase for the IS1541 insertion element 2058 49.19 0 2372472..2373821 - 449 145599381 - YPDSF_2105 - two-component system sensor kinase 2059 47.51 0 2373847..2374530 - 227 145599382 - YPDSF_2106 - two-component system response regulator 2060 49.83 0 2374718..2375923 + 401 145599383 - YPDSF_2107 - HlyD family secretion protein 2061 50.02 0 2375927..2377963 + 678 145599384 - YPDSF_2108 - ABC transporter, ATP-binding protein 2062 42.38 -1 2378218..2379864 - 548 145599385 - YPDSF_2109 - pyridine nucleotide-disulphide oxidoreductase 2063 39.36 -1 2379924..2381384 - 486 145599386 - YPDSF_2110 - permease 2064 39.15 -1 2381721..2382752 - 343 145599387 - YPDSF_2111 - peptidase 2065 36.46 -2 2382749..2382940 - 63 145599388 - YPDSF_2112 - hypothetical protein 2066 39.42 -1 2382974..2384155 - 393 145599389 - YPDSF_2113 - aminotransferase 2067 47.15 0 2384855..2386273 + 472 145599390 - YPDSF_2114 - hypothetical protein 2068 49.71 0 2386506..2388050 + 514 145599391 - YPDSF_2115 - two-component sensor histidine kinase 2069 51.41 0 2388047..2388754 + 235 145599392 - YPDSF_2116 - two-component response regulator 2070 33.17 -2 2389135..2390367 - 410 145599393 - YPDSF_2117 - hypothetical protein 2071 54.38 +1 2390612..2391490 - 292 145599394 cysM YPDSF_2118 - cysteine synthase B 2072 52.29 0 2391661..2392752 - 363 145599395 - YPDSF_2119 - sulfate/thiosulfate transporter subunit 2073 53.08 +1 2392742..2393617 - 291 145599396 cysW YPDSF_2120 - sulfate/thiosulfate transporter permease subunit 2074 53.72 +1 2393617..2394450 - 277 145599397 - YPDSF_2121 - sulfate/thiosulfate transporter subunit 2075 48.46 0 2394450..2395487 - 345 145599398 - YPDSF_2122 - thiosulfate transporter subunit 2076 50.62 0 2395802..2397334 - 510 145599399 - YPDSF_2123 - putative sialic acid transporter 2077 48.92 0 2397939..2398817 - 292 145599400 - YPDSF_2124 - transcriptional regulator 2078 47.98 0 2399006..2399476 - 156 145599401 - YPDSF_2125 - hypothetical protein 2079 56.47 +1 2399558..2400430 - 290 145599402 - YPDSF_2126 - N-acetylmannosamine kinase 2080 37.32 -2 2400699..2401826 + 375 145599403 - YPDSF_2127 - hypothetical protein 2081 55.27 +1 2402032..2402733 + 233 145599404 - YPDSF_2128 - N-acetylmannosamine-6-phosphate 2-epimerase 2082 48.55 0 2402796..2403689 + 297 145599405 - YPDSF_2129 - N-acetylneuraminate lyase 2083 48.22 0 2403787..2404686 - 299 145599406 - YPDSF_2130 - hypothetical protein 2084 49.28 0 2405835..2406248 + 137 145599407 - YPDSF_2133 - hypothetical protein 2085 44.60 0 2406804..2409014 + 736 145599408 - YPDSF_2134 - autotransporter 2086 32.13 -2 2409106..2409522 - 138 145599409 - YPDSF_2135 - hypothetical protein 2087 47.65 0 2409995..2410420 - 141 145599410 - YPDSF_2136 - putative acetyltransferase 2088 53.33 +1 2410703..2411632 + 309 145599411 - YPDSF_2137 - coproporphyrinogen III oxidase 2089 51.20 0 2411632..2412090 + 152 145599412 - YPDSF_2138 - hypothetical protein 2090 51.18 0 2412241..2414520 - 759 145599413 - YPDSF_2139 - malic enzyme 2091 46.79 0 2414716..2415339 - 207 145599414 - YPDSF_2140 - hypothetical protein 2092 46.00 0 2415496..2416095 - 199 145599415 - YPDSF_2141 - cytochrome c-type protein NapC 2093 50.64 0 2416123..2416590 - 155 145599416 napB YPDSF_2142 - diheme cytochrome c550 2094 53.03 +1 2416673..2419165 - 830 145599417 - YPDSF_2143 - nitrate reductase 2095 51.69 0 2419162..2419428 - 88 145599418 - YPDSF_2144 - assembly protein for periplasmic nitrate reductase 2096 52.98 +1 2419418..2419921 - 167 145599419 - YPDSF_2145 - ferredoxin-type protein NapF 2097 45.24 0 2420754..2421383 + 209 145599420 - YPDSF_2146 - nitrate/nitrite response regulator protein NarP 2098 48.39 0 2421396..2421674 - 92 145599421 - YPDSF_2147 - hypothetical protein 2099 51.18 0 2422089..2425220 + 1043 145599422 - YPDSF_2148 - aminoglycoside/multidrug efflux system 2100 39.49 -1 2425451..2426035 + 194 145599423 - YPDSF_2149 - hypothetical protein 2101 48.09 0 2426324..2426872 + 182 145599424 - YPDSF_2150 - hypothetical protein 2102 39.29 -1 2427620..2428795 - 391 145599425 - YPDSF_2151 - sulfatase modifier protein 2103 42.05 -1 2428853..2430526 - 557 145599426 - YPDSF_2152 - sulfatase 2104 51.07 0 2431004..2432074 - 356 145599427 - YPDSF_2153 - ABC-transporter, ATP-binding protein 2105 52.32 0 2432067..2433836 - 589 145599428 - YPDSF_2154 - binding protein-dependent transport system, inner-membrane component 2106 47.57 0 2433931..2435019 - 362 145599429 - YPDSF_2155 - hypothetical protein 2107 48.95 0 2435330..2435803 + 157 145599430 - YPDSF_2156 - hypothetical protein 2108 52.13 0 2435963..2436361 + 132 145599431 - YPDSF_2157 - hypothetical protein 2109 52.30 0 2436363..2437490 + 375 145599432 - YPDSF_2158 - succinyl-diaminopimelate desuccinylase 2110 50.88 0 2437487..2438164 + 225 145599433 - YPDSF_2159 - carboxypeptidase 2111 41.54 -1 2438232..2438426 + 64 145599434 - YPDSF_2160 - hypothetical protein 2112 55.46 +1 2438680..2440731 - 683 145599435 - YPDSF_2161 - acetyltransferase 2113 52.54 0 2440733..2441185 - 150 145599436 - YPDSF_2162 - hypothetical protein 2114 51.56 0 2441279..2442145 - 288 145599437 - YPDSF_2163 - hypothetical protein 2115 45.38 0 2442364..2443077 - 237 145599438 - YPDSF_2164 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2116 45.97 0 2443225..2443683 - 152 145599439 - YPDSF_2165 - transposase for the IS1541 insertion element 2117 51.46 0 2443858..2444916 - 352 145599440 - YPDSF_2166 - lipoprotein 2118 49.11 0 2444934..2445833 - 299 145599441 - YPDSF_2167 - dihydrodipicolinate synthase 2119 48.46 0 2445935..2446549 + 204 145599442 gcvR YPDSF_2168 - glycine cleavage system transcriptional repressor 2120 44.16 0 2446552..2447022 + 156 145599443 bcp YPDSF_2169 - thioredoxin-dependent thiol peroxidase 2121 41.67 -1 2447689..2448384 - 231 145599444 - YPDSF_2170 - hypothetical protein 2122 45.58 0 2448562..2448708 - 48 145599445 - YPDSF_2171 - hypothetical protein 2123 47.61 0 2448984..2450048 - 354 145599446 - YPDSF_2172 - membrane protein 2124 50.44 0 2450379..2451863 + 494 145599447 - YPDSF_2173 - hypothetical protein 2125 48.18 0 2451970..2452326 + 118 145599448 - YPDSF_2174 - arsenate reductase 2126 48.31 0 2452538..2453245 - 235 145599449 - YPDSF_2175 - DNA replication initiation factor 2127 45.97 0 2453433..2453891 - 152 145599450 - YPDSF_2176 - transposase for the IS1541 insertion element 2128 48.01 0 2454067..2454693 - 208 145599451 upp YPDSF_2177 - uracil phosphoribosyltransferase 2129 51.63 0 2455090..2456133 + 347 145599452 - YPDSF_2178 - phosphoribosylaminoimidazole synthetase 2130 50.55 0 2456248..2456886 + 212 145599453 purN YPDSF_2179 - phosphoribosylglycinamide formyltransferase 2131 39.01 -1 2457115..2457660 + 181 145599454 - YPDSF_2180 - spermidine acetyltransferase 2132 45.32 0 2457754..2458587 - 277 145599455 - YPDSF_2181 - hypothetical protein 2133 43.83 0 2458563..2458943 - 126 145599456 - YPDSF_2182 - hypothetical protein 2134 49.94 0 2459157..2459969 - 270 145599457 - YPDSF_2183 - phosphate transport ATP-binding protein 2135 51.12 0 2459997..2461694 - 565 145599458 - YPDSF_2184 - phosphate transport system permease 2136 54.21 +1 2461694..2463925 - 743 145599459 - YPDSF_2185 - phosphate transport system permease 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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