version 1.0
Yersinia pestis Pestoides F, complete genome - 1..4517345 3850 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2015 45.45 0 2325807..2327489 + 560 145599338 - YPDSF_2062 - hypothetical protein 2016 40.79 -1 2327486..2327968 + 160 145599339 - YPDSF_2063 - hypothetical protein 2017 35.16 -2 2328326..2328928 - 200 145599340 - YPDSF_2064 - LuxR family regulatory protein 2018 51.78 0 2330190..2331284 - 364 145599341 - YPDSF_2065 - murein hydrolase B 2019 48.82 0 2331613..2332632 + 339 145599342 - YPDSF_2066 - iron(III)-binding periplasmic protein 2020 52.61 0 2332688..2334274 + 528 145599343 - YPDSF_2067 - iron(III)-transport system permease 2021 52.57 0 2334271..2335320 + 349 145599344 - YPDSF_2068 - iron(III)-transport ATP-binding protein 2022 40.89 -1 2335393..2335908 - 171 145599345 - YPDSF_2069 - hypothetical protein 2023 39.92 -1 2336378..2336863 + 161 145599346 - YPDSF_2070 - hypothetical protein 2024 35.69 -2 2337093..2337941 - 282 145599347 - YPDSF_2071 - hypothetical protein 2025 47.26 0 2338772..2341198 + 808 145599348 - YPDSF_2072 - dimethyl sulfoxide reductase chain A protein 2026 50.81 0 2341210..2341827 + 205 145599349 - YPDSF_2073 - dimethyl sulfoxide reductase chain B protein 2027 50.45 0 2341829..2342605 + 258 145599350 - YPDSF_2074 - dimethyl sulfoxide reductase chain C protein 2028 48.74 0 2342963..2343559 + 198 145599351 - YPDSF_2075 - hypothetical protein 2029 52.28 0 2343556..2344125 + 189 145599352 - YPDSF_2076 - iron-sulphur protein 2030 50.08 0 2344371..2345027 - 218 145599353 - YPDSF_2077 - putative lipoprotein 2031 44.28 0 2345024..2345425 - 133 145599354 - YPDSF_2078 - lipoprotein 2032 47.17 0 2345407..2346078 - 223 145599355 - YPDSF_2079 - lipoprotein 2033 50.00 0 2346668..2347099 + 143 145599356 - YPDSF_2080 - hypothetical protein 2034 46.67 0 2347194..2347718 - 174 145599357 - YPDSF_2081 - B-type cytochrome 2035 50.97 0 2347944..2349179 - 411 145599358 - YPDSF_2082 - aminotransferase 2036 50.16 0 2349445..2350692 + 415 145599359 - YPDSF_2083 - hypothetical protein 2037 50.31 0 2350770..2351741 - 323 145599360 glk YPDSF_2084 - glucokinase 2038 48.85 0 2351922..2352398 - 158 145599361 - YPDSF_2085 - hypothetical protein 2039 51.42 0 2352501..2353379 + 292 145599362 - YPDSF_2086 - LysR family transcriptional regulator 2040 48.89 0 2353515..2354504 + 329 145599363 - YPDSF_2087 - ion channel protein 2041 43.72 0 2354675..2355088 + 137 145599364 - YPDSF_2088 - hypothetical protein 2042 48.62 0 2355181..2356410 - 409 145599365 - YPDSF_2089 - manganese transport protein MntH 2043 43.73 0 2356861..2357928 + 355 145599366 - YPDSF_2090 - nucleoside permease 2044 52.87 +1 2357946..2358032 + 28 145599367 - YPDSF_2091 - CNT family H+/nucleoside symporter 2045 49.22 0 2359266..2360681 + 471 145599368 gltX YPDSF_2092 - glutamyl-tRNA synthetase 2046 45.97 0 2361169..2361627 + 152 145599369 - YPDSF_2093 - transposase for the IS1541 insertion element 2047 44.72 0 2361894..2362499 + 201 145599370 - YPDSF_2094 - hypothetical protein 2048 44.25 0 2362631..2362978 + 115 145599371 - YPDSF_2095 - hypothetical protein 2049 45.83 0 2363079..2363294 - 71 145599372 - YPDSF_2096 - hypothetical protein 2050 51.07 0 2363314..2365326 - 670 145599373 ligA YPDSF_2097 - NAD-dependent DNA ligase LigA 2051 49.24 0 2365417..2366403 - 328 145599374 - YPDSF_2098 - cell division protein ZipA 2052 47.89 0 2366652..2367386 + 244 145599375 - YPDSF_2099 - putative sulfate transport protein CysZ 2053 49.95 0 2367543..2368511 + 322 145599376 - YPDSF_2100 - cysteine synthase A 2054 45.74 0 2369010..2369267 + 85 145599377 - YPDSF_2101 - phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) 2055 46.93 0 2369316..2371043 + 575 145599378 - YPDSF_2102 - phosphoenolpyruvate-protein phosphotransferase 2056 43.33 0 2371092..2371601 + 169 145599379 - YPDSF_2103 - glucose-specific PTS system component 2057 45.75 0 2371744..2372202 - 152 145599380 - YPDSF_2104 - transposase for the IS1541 insertion element 2058 49.19 0 2372472..2373821 - 449 145599381 - YPDSF_2105 - two-component system sensor kinase 2059 47.51 0 2373847..2374530 - 227 145599382 - YPDSF_2106 - two-component system response regulator 2060 49.83 0 2374718..2375923 + 401 145599383 - YPDSF_2107 - HlyD family secretion protein 2061 50.02 0 2375927..2377963 + 678 145599384 - YPDSF_2108 - ABC transporter, ATP-binding protein 2062 42.38 -1 2378218..2379864 - 548 145599385 - YPDSF_2109 - pyridine nucleotide-disulphide oxidoreductase 2063 39.36 -1 2379924..2381384 - 486 145599386 - YPDSF_2110 - permease 2064 39.15 -1 2381721..2382752 - 343 145599387 - YPDSF_2111 - peptidase 2065 36.46 -2 2382749..2382940 - 63 145599388 - YPDSF_2112 - hypothetical protein 2066 39.42 -1 2382974..2384155 - 393 145599389 - YPDSF_2113 - aminotransferase 2067 47.15 0 2384855..2386273 + 472 145599390 - YPDSF_2114 - hypothetical protein 2068 49.71 0 2386506..2388050 + 514 145599391 - YPDSF_2115 - two-component sensor histidine kinase 2069 51.41 0 2388047..2388754 + 235 145599392 - YPDSF_2116 - two-component response regulator 2070 33.17 -2 2389135..2390367 - 410 145599393 - YPDSF_2117 - hypothetical protein 2071 54.38 +1 2390612..2391490 - 292 145599394 cysM YPDSF_2118 - cysteine synthase B 2072 52.29 0 2391661..2392752 - 363 145599395 - YPDSF_2119 - sulfate/thiosulfate transporter subunit 2073 53.08 +1 2392742..2393617 - 291 145599396 cysW YPDSF_2120 - sulfate/thiosulfate transporter permease subunit 2074 53.72 +1 2393617..2394450 - 277 145599397 - YPDSF_2121 - sulfate/thiosulfate transporter subunit 2075 48.46 0 2394450..2395487 - 345 145599398 - YPDSF_2122 - thiosulfate transporter subunit 2076 50.62 0 2395802..2397334 - 510 145599399 - YPDSF_2123 - putative sialic acid transporter 2077 48.92 0 2397939..2398817 - 292 145599400 - YPDSF_2124 - transcriptional regulator 2078 47.98 0 2399006..2399476 - 156 145599401 - YPDSF_2125 - hypothetical protein 2079 56.47 +1 2399558..2400430 - 290 145599402 - YPDSF_2126 - N-acetylmannosamine kinase 2080 37.32 -2 2400699..2401826 + 375 145599403 - YPDSF_2127 - hypothetical protein 2081 55.27 +1 2402032..2402733 + 233 145599404 - YPDSF_2128 - N-acetylmannosamine-6-phosphate 2-epimerase 2082 48.55 0 2402796..2403689 + 297 145599405 - YPDSF_2129 - N-acetylneuraminate lyase 2083 48.22 0 2403787..2404686 - 299 145599406 - YPDSF_2130 - hypothetical protein 2084 49.28 0 2405835..2406248 + 137 145599407 - YPDSF_2133 - hypothetical protein 2085 44.60 0 2406804..2409014 + 736 145599408 - YPDSF_2134 - autotransporter 2086 32.13 -2 2409106..2409522 - 138 145599409 - YPDSF_2135 - hypothetical protein 2087 47.65 0 2409995..2410420 - 141 145599410 - YPDSF_2136 - putative acetyltransferase 2088 53.33 +1 2410703..2411632 + 309 145599411 - YPDSF_2137 - coproporphyrinogen III oxidase 2089 51.20 0 2411632..2412090 + 152 145599412 - YPDSF_2138 - hypothetical protein 2090 51.18 0 2412241..2414520 - 759 145599413 - YPDSF_2139 - malic enzyme 2091 46.79 0 2414716..2415339 - 207 145599414 - YPDSF_2140 - hypothetical protein 2092 46.00 0 2415496..2416095 - 199 145599415 - YPDSF_2141 - cytochrome c-type protein NapC 2093 50.64 0 2416123..2416590 - 155 145599416 napB YPDSF_2142 - diheme cytochrome c550 2094 53.03 +1 2416673..2419165 - 830 145599417 - YPDSF_2143 - nitrate reductase 2095 51.69 0 2419162..2419428 - 88 145599418 - YPDSF_2144 - assembly protein for periplasmic nitrate reductase 2096 52.98 +1 2419418..2419921 - 167 145599419 - YPDSF_2145 - ferredoxin-type protein NapF 2097 45.24 0 2420754..2421383 + 209 145599420 - YPDSF_2146 - nitrate/nitrite response regulator protein NarP 2098 48.39 0 2421396..2421674 - 92 145599421 - YPDSF_2147 - hypothetical protein 2099 51.18 0 2422089..2425220 + 1043 145599422 - YPDSF_2148 - aminoglycoside/multidrug efflux system 2100 39.49 -1 2425451..2426035 + 194 145599423 - YPDSF_2149 - hypothetical protein 2101 48.09 0 2426324..2426872 + 182 145599424 - YPDSF_2150 - hypothetical protein 2102 39.29 -1 2427620..2428795 - 391 145599425 - YPDSF_2151 - sulfatase modifier protein 2103 42.05 -1 2428853..2430526 - 557 145599426 - YPDSF_2152 - sulfatase 2104 51.07 0 2431004..2432074 - 356 145599427 - YPDSF_2153 - ABC-transporter, ATP-binding protein 2105 52.32 0 2432067..2433836 - 589 145599428 - YPDSF_2154 - binding protein-dependent transport system, inner-membrane component 2106 47.57 0 2433931..2435019 - 362 145599429 - YPDSF_2155 - hypothetical protein 2107 48.95 0 2435330..2435803 + 157 145599430 - YPDSF_2156 - hypothetical protein 2108 52.13 0 2435963..2436361 + 132 145599431 - YPDSF_2157 - hypothetical protein 2109 52.30 0 2436363..2437490 + 375 145599432 - YPDSF_2158 - succinyl-diaminopimelate desuccinylase 2110 50.88 0 2437487..2438164 + 225 145599433 - YPDSF_2159 - carboxypeptidase 2111 41.54 -1 2438232..2438426 + 64 145599434 - YPDSF_2160 - hypothetical protein 2112 55.46 +1 2438680..2440731 - 683 145599435 - YPDSF_2161 - acetyltransferase 2113 52.54 0 2440733..2441185 - 150 145599436 - YPDSF_2162 - hypothetical protein 2114 51.56 0 2441279..2442145 - 288 145599437 - YPDSF_2163 - hypothetical protein 48.06 MEAN 4.80 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0